RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 PLA2G12AQ9BZM1 189 aa16.62■□□□□ 0.25
MCF2L-230ENST00000491028 RNF122Q9H9V4 155 aa16.62■□□□□ 0.25
MCF2L-230ENST00000491028 GP6Q9HCN6 339 aa16.62■□□□□ 0.25
MCF2L-230ENST00000491028 NRIP3Q9NQ35 241 aa16.62■□□□□ 0.25
MCF2L-230ENST00000491028 B3GAT1Q9P2W7 334 aa16.62■□□□□ 0.25
MCF2L-230ENST00000491028 BAIAP2Q9UQB8 552 aa16.62■□□□□ 0.25
MCF2L-230ENST00000491028 SVILO95425 2214 aa16.61■□□□□ 0.25
MCF2L-230ENST00000491028 IGKV3D-15A0A087WSY6 115 aa16.61■□□□□ 0.25
MCF2L-230ENST00000491028 ZNF716A6NP11 495 aa16.61■□□□□ 0.25
MCF2L-230ENST00000491028 B8ZZF3 427 aa16.61■□□□□ 0.25
MCF2L-230ENST00000491028 MCIDASD6RGH6 385 aa16.61■□□□□ 0.25
MCF2L-230ENST00000491028 RAMP1O60894 148 aa16.61■□□□□ 0.25
MCF2L-230ENST00000491028 AQP8O94778 261 aa16.61■□□□□ 0.25
MCF2L-230ENST00000491028 IGHMP01871 453 aa16.61■□□□□ 0.25
MCF2L-230ENST00000491028 CD14P08571 375 aa16.61■□□□□ 0.25
MCF2L-230ENST00000491028 APEHP13798 732 aaKnown RBP16.61■□□□□ 0.25
MCF2L-230ENST00000491028 ZNF43P17038 809 aa16.61■□□□□ 0.25
MCF2L-230ENST00000491028 CASP6P55212 293 aa16.61■□□□□ 0.25
MCF2L-230ENST00000491028 RASGEF1BQ0VAM2 473 aa16.61■□□□□ 0.25
MCF2L-230ENST00000491028 GPAT4Q86UL3 456 aa16.61■□□□□ 0.25
MCF2L-230ENST00000491028 DOLPP1Q86YN1 238 aa16.61■□□□□ 0.25
MCF2L-230ENST00000491028 UEVLDQ8IX04 471 aa16.61■□□□□ 0.25
MCF2L-230ENST00000491028 OR2T33Q8NG76 320 aa16.61■□□□□ 0.25
MCF2L-230ENST00000491028 TM9SF2Q99805 663 aa16.61■□□□□ 0.25
MCF2L-230ENST00000491028 TACO1Q9BSH4 297 aaKnown RBP16.61■□□□□ 0.25
MCF2L-230ENST00000491028 TSSK6Q9BXA6 273 aa16.61■□□□□ 0.25
MCF2L-230ENST00000491028 TOR3AQ9H497 397 aa16.61■□□□□ 0.25
MCF2L-230ENST00000491028 RIBC2Q9H4K1 309 aa16.61■□□□□ 0.25
MCF2L-230ENST00000491028 SLC25A19Q9HC21 320 aa16.61■□□□□ 0.25
MCF2L-230ENST00000491028 GLRX2Q9NS18 164 aa16.61■□□□□ 0.25
MCF2L-230ENST00000491028 KLHL13Q9P2N7 655 aa16.61■□□□□ 0.25
MCF2L-230ENST00000491028 ARHGAP21Q5T5U3 1957 aa16.6■□□□□ 0.25
MCF2L-230ENST00000491028 PRRC2CQ9Y520 2896 aaKnown RBP16.6■□□□□ 0.25
MCF2L-230ENST00000491028 SPENQ96T58 3664 aaKnown RBP16.6■□□□□ 0.25
MCF2L-230ENST00000491028 COL6A6A6NMZ7 2263 aa16.6■□□□□ 0.25
MCF2L-230ENST00000491028 A0A1W2PRG6 482 aa16.6■□□□□ 0.25
MCF2L-230ENST00000491028 MBD3L4A6NDZ8 208 aaPredicted RBP16.6■□□□□ 0.25
MCF2L-230ENST00000491028 MBD3L3A6NE82 208 aaPredicted RBP16.6■□□□□ 0.25
MCF2L-230ENST00000491028 MBD3L5A6NJ08 208 aaPredicted RBP16.6■□□□□ 0.25
MCF2L-230ENST00000491028 DLGAP1O14490 977 aa16.6■□□□□ 0.25
MCF2L-230ENST00000491028 GPR171O14626 319 aa16.6■□□□□ 0.25
MCF2L-230ENST00000491028 TRAF3IP2O43734 574 aaPredicted RBP16.6■□□□□ 0.25
MCF2L-230ENST00000491028 SNAP29O95721 258 aa16.6■□□□□ 0.25
MCF2L-230ENST00000491028 TGM6O95932 706 aa16.6■□□□□ 0.25
MCF2L-230ENST00000491028 F13BP05160 661 aa16.6■□□□□ 0.25
MCF2L-230ENST00000491028 IGFBP1P08833 259 aaPredicted RBP16.6■□□□□ 0.25
MCF2L-230ENST00000491028 POU1F1P28069 291 aa16.6■□□□□ 0.25
MCF2L-230ENST00000491028 RPS6KA3P51812 740 aa16.6■□□□□ 0.25
MCF2L-230ENST00000491028 CTXN1P60606 82 aa16.6■□□□□ 0.25
MCF2L-230ENST00000491028 CDK5Q00535 292 aa16.6■□□□□ 0.25
MCF2L-230ENST00000491028 POU3F1Q03052 451 aaPredicted RBP16.6■□□□□ 0.25
MCF2L-230ENST00000491028 C1DQ13901 141 aaKnown RBP16.6■□□□□ 0.25
MCF2L-230ENST00000491028 OR2A2Q6IF42 318 aa16.6■□□□□ 0.25
MCF2L-230ENST00000491028 SLC27A4Q6P1M0 643 aa16.6■□□□□ 0.25
MCF2L-230ENST00000491028 B3GNT6Q6ZMB0 384 aa16.6■□□□□ 0.25
MCF2L-230ENST00000491028 IGFN1Q86VF2 1251 aa16.6■□□□□ 0.25
MCF2L-230ENST00000491028 MCEMP1Q8IX19 187 aa16.6■□□□□ 0.25
MCF2L-230ENST00000491028 KDM8Q8N371 416 aa16.6■□□□□ 0.25
MCF2L-230ENST00000491028 OR9K2Q8NGE7 335 aa16.6■□□□□ 0.25
MCF2L-230ENST00000491028 MBD3L2Q8NHZ7 208 aaPredicted RBP16.6■□□□□ 0.25
MCF2L-230ENST00000491028 ABHD3Q8WU67 409 aa16.6■□□□□ 0.25
MCF2L-230ENST00000491028 MBOAT4Q96T53 435 aa16.6■□□□□ 0.25
MCF2L-230ENST00000491028 KATNB1Q9BVA0 655 aa16.6■□□□□ 0.25
MCF2L-230ENST00000491028 IFT27Q9BW83 186 aa16.6■□□□□ 0.25
MCF2L-230ENST00000491028 POLDIP3Q9BY77 421 aaKnown RBP16.6■□□□□ 0.25
MCF2L-230ENST00000491028 EMC3Q9P0I2 261 aa16.6■□□□□ 0.25
MCF2L-230ENST00000491028 IL20RAQ9UHF4 553 aa16.6■□□□□ 0.25
MCF2L-230ENST00000491028 FAM215AQ9Y5M1 114 aa16.6■□□□□ 0.25
MCF2L-230ENST00000491028 ZAR1LA6NP61 321 aa16.59■□□□□ 0.25
MCF2L-230ENST00000491028 ZNF724A8MTY0 619 aa16.59■□□□□ 0.25
MCF2L-230ENST00000491028 BHLHE40O14503 412 aa16.59■□□□□ 0.25
MCF2L-230ENST00000491028 IMPA2O14732 288 aa16.59■□□□□ 0.25
MCF2L-230ENST00000491028 ARPC3O15145 178 aa16.59■□□□□ 0.25
MCF2L-230ENST00000491028 AKAP8O43823 692 aaKnown RBP16.59■□□□□ 0.25
MCF2L-230ENST00000491028 IDH3BO43837 385 aa16.59■□□□□ 0.25
MCF2L-230ENST00000491028 GIPRP48546 466 aa16.59■□□□□ 0.25
MCF2L-230ENST00000491028 HSPA13P48723 471 aa16.59■□□□□ 0.25
MCF2L-230ENST00000491028 DAP3P51398 398 aaKnown RBP16.59■□□□□ 0.25
MCF2L-230ENST00000491028 SMSP52788 366 aa16.59■□□□□ 0.25
MCF2L-230ENST00000491028 AQP4P55087 323 aa16.59■□□□□ 0.25
MCF2L-230ENST00000491028 PTGES3Q15185 160 aaKnown RBP16.59■□□□□ 0.25
MCF2L-230ENST00000491028 EIF2S3LQ2VIR3 472 aaKnown RBP16.59■□□□□ 0.25
MCF2L-230ENST00000491028 PGGHGQ32M88 737 aa16.59■□□□□ 0.25
MCF2L-230ENST00000491028 ZIK1Q3SY52 487 aaPredicted RBP16.59■□□□□ 0.25
MCF2L-230ENST00000491028 CLEC12AQ5QGZ9 265 aa16.59■□□□□ 0.25
MCF2L-230ENST00000491028 GPR139Q6DWJ6 353 aa16.59■□□□□ 0.25
MCF2L-230ENST00000491028 RTL6Q6ICC9 239 aa16.59■□□□□ 0.25
MCF2L-230ENST00000491028 IZUMO2Q6UXV1 221 aa16.59■□□□□ 0.25
MCF2L-230ENST00000491028 RPTNQ6XPR3 784 aa16.59■□□□□ 0.25
MCF2L-230ENST00000491028 CREB3L2Q70SY1 520 aa16.59■□□□□ 0.25
MCF2L-230ENST00000491028 FAM122BQ7Z309 247 aa16.59■□□□□ 0.25
MCF2L-230ENST00000491028 HDDC2Q7Z4H3 204 aa16.59■□□□□ 0.25
MCF2L-230ENST00000491028 LNX2Q8N448 690 aa16.59■□□□□ 0.25
MCF2L-230ENST00000491028 GALNT11Q8NCW6 608 aa16.59■□□□□ 0.25
MCF2L-230ENST00000491028 GMPPAQ96IJ6 420 aaPredicted RBP16.59■□□□□ 0.25
MCF2L-230ENST00000491028 ZNF570Q96NI8 536 aa16.59■□□□□ 0.25
MCF2L-230ENST00000491028 ZFP3Q96NJ6 502 aa16.59■□□□□ 0.25
MCF2L-230ENST00000491028 TEX12Q9BXU0 123 aa16.59■□□□□ 0.25
MCF2L-230ENST00000491028 GRIP2Q9C0E4 1043 aa16.59■□□□□ 0.25
MCF2L-230ENST00000491028 ENKD1Q9H0I2 346 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms