RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 DNAJA1P31689 397 aaKnown RBP14.05□□□□□ -0.16
TRA2A-208ENST00000490942 SIRPAP78324 504 aa14.05□□□□□ -0.16
TRA2A-208ENST00000490942 LSM11P83369 360 aaKnown RBP eCLIP14.05□□□□□ -0.16
TRA2A-208ENST00000490942 C1DQ13901 141 aaKnown RBP14.05□□□□□ -0.16
TRA2A-208ENST00000490942 MICAQ29983 383 aa14.05□□□□□ -0.16
TRA2A-208ENST00000490942 EXOC3L2Q2M3D2 409 aa14.05□□□□□ -0.16
TRA2A-208ENST00000490942 NHLRC1Q6VVB1 395 aa14.05□□□□□ -0.16
TRA2A-208ENST00000490942 BEND4Q6ZU67 534 aa14.05□□□□□ -0.16
TRA2A-208ENST00000490942 LRRC17Q8N6Y2 441 aa14.05□□□□□ -0.16
TRA2A-208ENST00000490942 ZIC4Q8N9L1 334 aa14.05□□□□□ -0.16
TRA2A-208ENST00000490942 RNASE6Q93091 150 aaKnown RBP14.05□□□□□ -0.16
TRA2A-208ENST00000490942 APH1AQ96BI3 265 aa14.05□□□□□ -0.16
TRA2A-208ENST00000490942 STX18Q9P2W9 335 aaKnown RBP14.05□□□□□ -0.16
TRA2A-208ENST00000490942 SEC14L4Q9UDX3 406 aa14.05□□□□□ -0.16
TRA2A-208ENST00000490942 CLEC4AQ9UMR7 237 aa14.05□□□□□ -0.16
TRA2A-208ENST00000490942 GCN1Q92616 2671 aaKnown RBP14.05□□□□□ -0.16
TRA2A-208ENST00000490942 CENPBD1B2RD01 187 aa14.04□□□□□ -0.16
TRA2A-208ENST00000490942 GNGT2O14610 69 aa14.04□□□□□ -0.16
TRA2A-208ENST00000490942 CLOCKO15516 846 aa14.04□□□□□ -0.16
TRA2A-208ENST00000490942 TRAF3IP2O43734 574 aaPredicted RBP14.04□□□□□ -0.16
TRA2A-208ENST00000490942 CCNB2O95067 398 aa14.04□□□□□ -0.16
TRA2A-208ENST00000490942 MAKP20794 623 aa14.04□□□□□ -0.16
TRA2A-208ENST00000490942 PTNP21246 168 aa14.04□□□□□ -0.16
TRA2A-208ENST00000490942 FASP25445 335 aa14.04□□□□□ -0.16
TRA2A-208ENST00000490942 ARHGDIAP52565 204 aa14.04□□□□□ -0.16
TRA2A-208ENST00000490942 SORDQ00796 357 aa14.04□□□□□ -0.16
TRA2A-208ENST00000490942 TFF3Q07654 80 aa14.04□□□□□ -0.16
TRA2A-208ENST00000490942 KPNB1Q14974 876 aaKnown RBP14.04□□□□□ -0.16
TRA2A-208ENST00000490942 P2RY6Q15077 328 aa14.04□□□□□ -0.16
TRA2A-208ENST00000490942 ATP6AP1Q15904 470 aa14.04□□□□□ -0.16
TRA2A-208ENST00000490942 ZNF770Q6IQ21 691 aaPredicted RBP14.04□□□□□ -0.16
TRA2A-208ENST00000490942 TFAP2EQ6VUC0 442 aa14.04□□□□□ -0.16
TRA2A-208ENST00000490942 NUFIP2Q7Z417 695 aaKnown RBP14.04□□□□□ -0.16
TRA2A-208ENST00000490942 HDDC2Q7Z4H3 204 aa14.04□□□□□ -0.16
TRA2A-208ENST00000490942 ZER1Q7Z7L7 766 aa14.04□□□□□ -0.16
TRA2A-208ENST00000490942 OAFQ86UD1 273 aa14.04□□□□□ -0.16
TRA2A-208ENST00000490942 ADAD1Q96M93 576 aaKnown RBP14.04□□□□□ -0.16
TRA2A-208ENST00000490942 PSMG3-AS1Q96PY0 264 aa14.04□□□□□ -0.16
TRA2A-208ENST00000490942 USB1Q9BQ65 265 aaKnown RBP14.04□□□□□ -0.16
TRA2A-208ENST00000490942 BDH2Q9BUT1 245 aa14.04□□□□□ -0.16
TRA2A-208ENST00000490942 DENND2DQ9H6A0 471 aaPredicted RBP14.04□□□□□ -0.16
TRA2A-208ENST00000490942 MALT1Q9UDY8 824 aa14.04□□□□□ -0.16
TRA2A-208ENST00000490942 SPTAN1Q13813 2472 aaKnown RBP14.03□□□□□ -0.16
TRA2A-208ENST00000490942 FAM90A27PA6NNH2 459 aa14.03□□□□□ -0.16
TRA2A-208ENST00000490942 EEF1E1-BLOC1S5C9J1V9 151 aa14.03□□□□□ -0.16
TRA2A-208ENST00000490942 EEF1E1O43324 174 aaKnown RBP14.03□□□□□ -0.16
TRA2A-208ENST00000490942 PTP4A3O75365 173 aa14.03□□□□□ -0.16
TRA2A-208ENST00000490942 ZNF432O94892 652 aa14.03□□□□□ -0.16
TRA2A-208ENST00000490942 HPRP00739 348 aa14.03□□□□□ -0.16
TRA2A-208ENST00000490942 CBLP22681 906 aa14.03□□□□□ -0.16
TRA2A-208ENST00000490942 AHCYP23526 432 aa14.03□□□□□ -0.16
TRA2A-208ENST00000490942 GSSP48637 474 aa14.03□□□□□ -0.16
TRA2A-208ENST00000490942 POU3F1Q03052 451 aaPredicted RBP14.03□□□□□ -0.16
TRA2A-208ENST00000490942 RPL18Q07020 188 aaKnown RBP14.03□□□□□ -0.16
TRA2A-208ENST00000490942 TSPAN31Q12999 210 aa14.03□□□□□ -0.16
TRA2A-208ENST00000490942 CDSNQ15517 529 aa14.03□□□□□ -0.16
TRA2A-208ENST00000490942 ZBED5Q49AG3 693 aa14.03□□□□□ -0.16
TRA2A-208ENST00000490942 C1QTNF12Q5T7M4 302 aa14.03□□□□□ -0.16
TRA2A-208ENST00000490942 FBXW9Q5XUX1 488 aa14.03□□□□□ -0.16
TRA2A-208ENST00000490942 RPL13AP3Q6NVV1 102 aa14.03□□□□□ -0.16
TRA2A-208ENST00000490942 PGBD2Q6P3X8 592 aa14.03□□□□□ -0.16
TRA2A-208ENST00000490942 Q6ZT83 130 aa14.03□□□□□ -0.16
TRA2A-208ENST00000490942 AAED1Q7RTV5 226 aa14.03□□□□□ -0.16
TRA2A-208ENST00000490942 KIF18BQ86Y91 864 aa14.03□□□□□ -0.16
TRA2A-208ENST00000490942 ZNF100Q8IYN0 542 aa14.03□□□□□ -0.16
TRA2A-208ENST00000490942 POMGNT2Q8NAT1 580 aa14.03□□□□□ -0.16
TRA2A-208ENST00000490942 ACBD4Q8NC06 268 aa14.03□□□□□ -0.16
TRA2A-208ENST00000490942 GNPDA2Q8TDQ7 276 aa14.03□□□□□ -0.16
TRA2A-208ENST00000490942 FAM46AQ96IP4 442 aaKnown RBP14.03□□□□□ -0.16
TRA2A-208ENST00000490942 LRR1Q96L50 414 aa14.03□□□□□ -0.16
TRA2A-208ENST00000490942 ZNF385AQ96PM9 386 aaKnown RBP14.03□□□□□ -0.16
TRA2A-208ENST00000490942 DGCR6LQ9BY27 220 aa14.03□□□□□ -0.16
TRA2A-208ENST00000490942 LINC00470Q9BZP3 86 aa14.03□□□□□ -0.16
TRA2A-208ENST00000490942 UCK2Q9BZX2 261 aa14.03□□□□□ -0.16
TRA2A-208ENST00000490942 OR10A4Q9H209 315 aa14.03□□□□□ -0.16
TRA2A-208ENST00000490942 SLC24A3Q9HC58 644 aa14.03□□□□□ -0.16
TRA2A-208ENST00000490942 MGAT4BQ9UQ53 548 aa14.03□□□□□ -0.16
TRA2A-208ENST00000490942 SIGLEC7Q9Y286 467 aa14.03□□□□□ -0.16
TRA2A-208ENST00000490942 BLOC1S5-TXNDC5H3BN57 136 aa14.02□□□□□ -0.17
TRA2A-208ENST00000490942 CDC42EP2O14613 210 aa14.02□□□□□ -0.17
TRA2A-208ENST00000490942 RNF13O43567 381 aa14.02□□□□□ -0.17
TRA2A-208ENST00000490942 E2F6O75461 281 aa14.02□□□□□ -0.17
TRA2A-208ENST00000490942 SMNDC1O75940 238 aaKnown RBP eCLIP14.02□□□□□ -0.175e-9■□□□□ 8.5
TRA2A-208ENST00000490942 ADAP00813 363 aa14.02□□□□□ -0.17
TRA2A-208ENST00000490942 IGHMP01871 453 aa14.02□□□□□ -0.17
TRA2A-208ENST00000490942 GSTM3P21266 225 aa14.02□□□□□ -0.17
TRA2A-208ENST00000490942 GPR4P46093 362 aa14.02□□□□□ -0.17
TRA2A-208ENST00000490942 DAP3P51398 398 aaKnown RBP14.02□□□□□ -0.17
TRA2A-208ENST00000490942 COX10Q12887 443 aa14.02□□□□□ -0.17
TRA2A-208ENST00000490942 FOXD4Q12950 439 aaPredicted RBP14.02□□□□□ -0.17
TRA2A-208ENST00000490942 FHL1Q13642 323 aa14.02□□□□□ -0.17
TRA2A-208ENST00000490942 ALG10Q5BKT4 473 aa14.02□□□□□ -0.17
TRA2A-208ENST00000490942 FAM205BPQ63HN1 556 aa14.02□□□□□ -0.17
TRA2A-208ENST00000490942 SHQ1Q6PI26 577 aaKnown RBP14.02□□□□□ -0.17
TRA2A-208ENST00000490942 ZNF474Q6S9Z5 364 aaPredicted RBP14.02□□□□□ -0.17
TRA2A-208ENST00000490942 CD300LDQ6UXZ3 194 aa14.02□□□□□ -0.17
TRA2A-208ENST00000490942 SSX8Q7RTT4 187 aa14.02□□□□□ -0.17
TRA2A-208ENST00000490942 ABHD12BQ7Z5M8 362 aaPredicted RBP14.02□□□□□ -0.17
TRA2A-208ENST00000490942 GABRG1Q8N1C3 465 aa14.02□□□□□ -0.17
TRA2A-208ENST00000490942 KDM8Q8N371 416 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms