RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833	RHBDD2	Q6NTF9	364 aa		5.78	□□□□□ -1.48
FN1-223	ENST00000490833	TMEM71	Q6P5X7	295 aa		5.78	□□□□□ -1.48
FN1-223	ENST00000490833	KIRREL2	Q6UWL6	708 aa		5.78	□□□□□ -1.48
FN1-223	ENST00000490833	TTLL10	Q6ZVT0	673 aa		5.78	□□□□□ -1.48
FN1-223	ENST00000490833	CREB3L2	Q70SY1	520 aa		5.78	□□□□□ -1.48
FN1-223	ENST00000490833	ZNF767P	Q75MW2	155 aa		5.78	□□□□□ -1.48
FN1-223	ENST00000490833	FGD2	Q7Z6J4	655 aa		5.78	□□□□□ -1.48
FN1-223	ENST00000490833	NOXA1	Q86UR1	476 aa		5.78	□□□□□ -1.48
FN1-223	ENST00000490833	TMEM52	Q8NDY8	209 aa		5.78	□□□□□ -1.48
FN1-223	ENST00000490833	CCDC54	Q8NEL0	328 aa		5.78	□□□□□ -1.48
FN1-223	ENST00000490833	OR5J2	Q8NH18	312 aa		5.78	□□□□□ -1.48
FN1-223	ENST00000490833	OR4C3	Q8NH37	302 aa		5.78	□□□□□ -1.48
FN1-223	ENST00000490833	OR4K13	Q8NH42	304 aa		5.78	□□□□□ -1.48
FN1-223	ENST00000490833	OR56B4	Q8NH76	319 aa		5.78	□□□□□ -1.48
FN1-223	ENST00000490833	OR5AK2	Q8NH90	309 aa		5.78	□□□□□ -1.48
FN1-223	ENST00000490833	TRMT10A	Q8TBZ6	339 aa	Known RBP	5.78	□□□□□ -1.48
FN1-223	ENST00000490833	RPS4Y2	Q8TD47	263 aa		5.78	□□□□□ -1.48
FN1-223	ENST00000490833	PTPMT1	Q8WUK0	201 aa	Predicted RBP	5.78	□□□□□ -1.48
FN1-223	ENST00000490833	FCAMR	Q8WWV6	532 aa		5.78	□□□□□ -1.48
FN1-223	ENST00000490833	SLC7A6	Q92536	515 aa		5.78	□□□□□ -1.48
FN1-223	ENST00000490833	CLDN23	Q96B33	292 aa		5.78	□□□□□ -1.48
FN1-223	ENST00000490833	DDIT4L	Q96D03	193 aa		5.78	□□□□□ -1.48
FN1-223	ENST00000490833	DDO	Q99489	341 aa		5.78	□□□□□ -1.48
FN1-223	ENST00000490833	NRTN	Q99748	197 aa		5.78	□□□□□ -1.48
FN1-223	ENST00000490833	ORAI3	Q9BRQ5	295 aa		5.78	□□□□□ -1.48
FN1-223	ENST00000490833	POTEKP	Q9BYX7	375 aa		5.78	□□□□□ -1.48
FN1-223	ENST00000490833	C11orf54	Q9H0W9	315 aa	Predicted RBP	5.78	□□□□□ -1.48
FN1-223	ENST00000490833	ZNF768	Q9H5H4	540 aa	Known RBP	5.78	□□□□□ -1.48
FN1-223	ENST00000490833	RERGL	Q9H628	205 aa		5.78	□□□□□ -1.48
FN1-223	ENST00000490833	MARCH7	Q9H992	704 aa		5.78	□□□□□ -1.48
FN1-223	ENST00000490833	GPN1	Q9HCN4	374 aa	Predicted RBP	5.78	□□□□□ -1.48
FN1-223	ENST00000490833	MMP25	Q9NPA2	562 aa		5.78	□□□□□ -1.48
FN1-223	ENST00000490833	KLHL1	Q9NR64	748 aa		5.78	□□□□□ -1.48
FN1-223	ENST00000490833	PNO1	Q9NRX1	252 aa	Known RBP	5.78	□□□□□ -1.48
FN1-223	ENST00000490833	INIP	Q9NRY2	104 aa		5.78	□□□□□ -1.48
FN1-223	ENST00000490833	LANCL2	Q9NS86	450 aa		5.78	□□□□□ -1.48
FN1-223	ENST00000490833	ACOXL	Q9NUZ1	547 aa		5.78	□□□□□ -1.48
FN1-223	ENST00000490833	HCN3	Q9P1Z3	774 aa		5.78	□□□□□ -1.48
FN1-223	ENST00000490833	NCDN	Q9UBB6	729 aa		5.78	□□□□□ -1.48
FN1-223	ENST00000490833	UPB1	Q9UBR1	384 aa		5.78	□□□□□ -1.48
FN1-223	ENST00000490833	KCNG2	Q9UJ96	466 aa		5.78	□□□□□ -1.48
FN1-223	ENST00000490833	GNG8	Q9UK08	70 aa		5.78	□□□□□ -1.48
FN1-223	ENST00000490833	PPIE	Q9UNP9	301 aa	Known RBP	5.78	□□□□□ -1.48
FN1-223	ENST00000490833	RASD1	Q9Y272	281 aa		5.78	□□□□□ -1.48
FN1-223	ENST00000490833	MRPS2	Q9Y399	296 aa	Known RBP	5.78	□□□□□ -1.48
FN1-223	ENST00000490833	CACNG2	Q9Y698	323 aa		5.78	□□□□□ -1.48
FN1-223	ENST00000490833	RNF215	Q9Y6U7	377 aa		5.78	□□□□□ -1.48
FN1-223	ENST00000490833		V9GY05	133 aa		5.78	□□□□□ -1.48
FN1-223	ENST00000490833	TICRR	Q7Z2Z1	1910 aa		5.78	□□□□□ -1.48
FN1-223	ENST00000490833	IGLV3-12	A0A075B6K2	115 aa		5.77	□□□□□ -1.49
FN1-223	ENST00000490833	IGHV1OR21-1	A0A087WYE8	117 aa		5.77	□□□□□ -1.49
FN1-223	ENST00000490833	IGHV5-51	A0A0C4DH38	117 aa		5.77	□□□□□ -1.49
FN1-223	ENST00000490833		A0A1W2PS29	197 aa		5.77	□□□□□ -1.49
FN1-223	ENST00000490833	CD8B2	A6NJW9	211 aa		5.77	□□□□□ -1.49
FN1-223	ENST00000490833	IFITM5	A6NNB3	132 aa		5.77	□□□□□ -1.49
FN1-223	ENST00000490833	ACOT7	O00154	380 aa		5.77	□□□□□ -1.49
FN1-223	ENST00000490833	GPR171	O14626	319 aa		5.77	□□□□□ -1.49
FN1-223	ENST00000490833	HCRTR2	O43614	444 aa		5.77	□□□□□ -1.49
FN1-223	ENST00000490833	TLX3	O43711	291 aa	Predicted RBP	5.77	□□□□□ -1.49
FN1-223	ENST00000490833	ATP6V1G1	O75348	118 aa		5.77	□□□□□ -1.49
FN1-223	ENST00000490833	RFPL3	O75679	317 aa		5.77	□□□□□ -1.49
FN1-223	ENST00000490833	AHSA1	O95433	338 aa		5.77	□□□□□ -1.49
FN1-223	ENST00000490833	SLC2A10	O95528	541 aa		5.77	□□□□□ -1.49
FN1-223	ENST00000490833	IGHM	P01871	453 aa		5.77	□□□□□ -1.49
FN1-223	ENST00000490833	HRG	P04196	525 aa		5.77	□□□□□ -1.49
FN1-223	ENST00000490833	ERCC1	P07992	297 aa	Predicted RBP	5.77	□□□□□ -1.49
FN1-223	ENST00000490833	CD8B	P10966	210 aa		5.77	□□□□□ -1.49
FN1-223	ENST00000490833	PRKCA	P17252	672 aa		5.77	□□□□□ -1.49
FN1-223	ENST00000490833	ELK1	P19419	428 aa		5.77	□□□□□ -1.49
FN1-223	ENST00000490833	FUT4	P22083	530 aa		5.77	□□□□□ -1.49
FN1-223	ENST00000490833	IGFBP4	P22692	258 aa		5.77	□□□□□ -1.49
FN1-223	ENST00000490833	STOM	P27105	288 aa		5.77	□□□□□ -1.49
FN1-223	ENST00000490833	COL8A1	P27658	744 aa		5.77	□□□□□ -1.49
FN1-223	ENST00000490833	ITPKB	P27987	946 aa		5.77	□□□□□ -1.49
FN1-223	ENST00000490833	ADH6	P28332	368 aa		5.77	□□□□□ -1.49
FN1-223	ENST00000490833	UQCRC1	P31930	480 aa		5.77	□□□□□ -1.49
FN1-223	ENST00000490833	EIF1	P41567	113 aa	Known RBP	5.77	□□□□□ -1.49
FN1-223	ENST00000490833	GUCA1A	P43080	201 aa	Predicted RBP	5.77	□□□□□ -1.49
FN1-223	ENST00000490833	RFX2	P48378	723 aa		5.77	□□□□□ -1.49
FN1-223	ENST00000490833	ART1	P52961	327 aa		5.77	□□□□□ -1.49
FN1-223	ENST00000490833	MAZ	P56270	477 aa	Known RBP	5.77	□□□□□ -1.49
FN1-223	ENST00000490833	OR12D2	P58182	307 aa		5.77	□□□□□ -1.49
FN1-223	ENST00000490833	FXYD6P3	P58550	94 aa		5.77	□□□□□ -1.49
FN1-223	ENST00000490833	GPR85	P60893	370 aa		5.77	□□□□□ -1.49
FN1-223	ENST00000490833	RPL27	P61353	136 aa	Known RBP	5.77	□□□□□ -1.49
FN1-223	ENST00000490833	RRAS2	P62070	204 aa	Predicted RBP	5.77	□□□□□ -1.49
FN1-223	ENST00000490833	ZNF85	Q03923	595 aa		5.77	□□□□□ -1.49
FN1-223	ENST00000490833	PLCXD2	Q0VAA5	305 aa		5.77	□□□□□ -1.49
FN1-223	ENST00000490833	SNTA1	Q13424	505 aa		5.77	□□□□□ -1.49
FN1-223	ENST00000490833	TNK1	Q13470	666 aa		5.77	□□□□□ -1.49
FN1-223	ENST00000490833	TRA2A	Q13595	282 aa	Known RBP eCLIP	5.77	□□□□□ -1.49
FN1-223	ENST00000490833	ALKBH1	Q13686	389 aa	Known RBP	5.77	□□□□□ -1.49
FN1-223	ENST00000490833	IL11RA	Q14626	422 aa		5.77	□□□□□ -1.49
FN1-223	ENST00000490833	CDK10	Q15131	360 aa		5.77	□□□□□ -1.49
FN1-223	ENST00000490833	TATDN3	Q17R31	274 aa		5.77	□□□□□ -1.49
FN1-223	ENST00000490833	NDUFAF6	Q330K2	333 aa		5.77	□□□□□ -1.49
FN1-223	ENST00000490833	TBRG1	Q3YBR2	411 aa		5.77	□□□□□ -1.49
FN1-223	ENST00000490833	TEX30	Q5JUR7	227 aa		5.77	□□□□□ -1.49
FN1-223	ENST00000490833	ELFN2	Q5R3F8	820 aa		5.77	□□□□□ -1.49
FN1-223	ENST00000490833	ARHGAP40	Q5TG30	622 aa		5.77	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms