RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 CCDC154A6NI56 674 aa11.98□□□□□ -0.49
VARS-227ENST00000489979 ZNF99A8MXY4 864 aaPredicted RBP11.98□□□□□ -0.49
VARS-227ENST00000489979 TMPRSS2O15393 492 aa11.98□□□□□ -0.49
VARS-227ENST00000489979 NCR1O76036 304 aa11.98□□□□□ -0.49
VARS-227ENST00000489979 AHSA1O95433 338 aa11.98□□□□□ -0.49
VARS-227ENST00000489979 HLA-HP01893 362 aa11.98□□□□□ -0.49
VARS-227ENST00000489979 PRG2P13727 222 aa11.98□□□□□ -0.49
VARS-227ENST00000489979 GLRXP35754 106 aa11.98□□□□□ -0.49
VARS-227ENST00000489979 MYBPC1Q00872 1141 aa11.98□□□□□ -0.49
VARS-227ENST00000489979 PDLIM3Q53GG5 364 aaPredicted RBP11.98□□□□□ -0.49
VARS-227ENST00000489979 ZNF311Q5JNZ3 666 aa11.98□□□□□ -0.49
VARS-227ENST00000489979 COX20Q5RI15 118 aa11.98□□□□□ -0.49
VARS-227ENST00000489979 ATG16L1Q676U5 607 aa11.98□□□□□ -0.49
VARS-227ENST00000489979 REP15Q6BDI9 236 aa11.98□□□□□ -0.49
VARS-227ENST00000489979 RIBC1Q8N443 379 aaPredicted RBP11.98□□□□□ -0.49
VARS-227ENST00000489979 TEX29Q8N6K0 151 aa11.98□□□□□ -0.49
VARS-227ENST00000489979 MFSD8Q8NHS3 518 aa11.98□□□□□ -0.49
VARS-227ENST00000489979 PNPT1Q8TCS8 783 aaKnown RBP11.98□□□□□ -0.49
VARS-227ENST00000489979 STK35Q8TDR2 534 aa11.98□□□□□ -0.49
VARS-227ENST00000489979 TCP10LQ8TDR4 215 aa11.98□□□□□ -0.49
VARS-227ENST00000489979 CCDC115Q96NT0 180 aa11.98□□□□□ -0.49
VARS-227ENST00000489979 OXGR1Q96P68 337 aa11.98□□□□□ -0.49
VARS-227ENST00000489979 ZIM3Q96PE6 472 aa11.98□□□□□ -0.49
VARS-227ENST00000489979 SLC6A7Q99884 636 aa11.98□□□□□ -0.49
VARS-227ENST00000489979 PTDSS2Q9BVG9 487 aa11.98□□□□□ -0.49
VARS-227ENST00000489979 SUCNR1Q9BXA5 334 aa11.98□□□□□ -0.49
VARS-227ENST00000489979 ESM1Q9NQ30 184 aa11.98□□□□□ -0.49
VARS-227ENST00000489979 G6PC2Q9NQR9 355 aa11.98□□□□□ -0.49
VARS-227ENST00000489979 B3GNT2Q9NY97 397 aa11.98□□□□□ -0.49
VARS-227ENST00000489979 B3GAT1Q9P2W7 334 aa11.98□□□□□ -0.49
VARS-227ENST00000489979 BTNL2Q9UIR0 455 aa11.98□□□□□ -0.49
VARS-227ENST00000489979 PRDM4Q9UKN5 801 aa11.98□□□□□ -0.49
VARS-227ENST00000489979 FZR1Q9UM11 496 aa11.98□□□□□ -0.49
VARS-227ENST00000489979 NOX1Q9Y5S8 564 aa11.98□□□□□ -0.49
VARS-227ENST00000489979 CMYA5Q8N3K9 4069 aa11.97□□□□□ -0.49
VARS-227ENST00000489979 TLDC2A0PJX2 215 aa11.97□□□□□ -0.49
VARS-227ENST00000489979 RP2O75695 350 aa11.97□□□□□ -0.49
VARS-227ENST00000489979 GSNP06396 782 aa11.97□□□□□ -0.49
VARS-227ENST00000489979 NAT2P11245 290 aa11.97□□□□□ -0.49
VARS-227ENST00000489979 CD79AP11912 226 aa11.97□□□□□ -0.49
VARS-227ENST00000489979 ZNF35P13682 527 aa11.97□□□□□ -0.49
VARS-227ENST00000489979 NCF2P19878 526 aaPredicted RBP11.97□□□□□ -0.49
VARS-227ENST00000489979 GTF2E2P29084 291 aaKnown RBP11.97□□□□□ -0.49
VARS-227ENST00000489979 S100A3P33764 101 aa11.97□□□□□ -0.49
VARS-227ENST00000489979 RPS5P46782 204 aaKnown RBP11.97□□□□□ -0.49
VARS-227ENST00000489979 ANXA11P50995 505 aaKnown RBP11.97□□□□□ -0.49
VARS-227ENST00000489979 CLNS1AP54105 237 aaKnown RBP11.97□□□□□ -0.49
VARS-227ENST00000489979 TXNL4AP83876 142 aaKnown RBP11.97□□□□□ -0.49
VARS-227ENST00000489979 PIGFQ07326 219 aa11.97□□□□□ -0.49
VARS-227ENST00000489979 C1DQ13901 141 aaKnown RBP11.97□□□□□ -0.49
VARS-227ENST00000489979 MAPK11Q15759 364 aa11.97□□□□□ -0.49
VARS-227ENST00000489979 TRMT5Q32P41 509 aaKnown RBP11.97□□□□□ -0.49
VARS-227ENST00000489979 LIN52Q52LA3 116 aa11.97□□□□□ -0.49
VARS-227ENST00000489979 PHYHD1Q5SRE7 291 aa11.97□□□□□ -0.49
VARS-227ENST00000489979 CLIP4Q8N3C7 705 aa11.97□□□□□ -0.49
VARS-227ENST00000489979 TRIML2Q8N7C3 387 aa11.97□□□□□ -0.49
VARS-227ENST00000489979 ZDHHC22Q8N966 263 aa11.97□□□□□ -0.49
VARS-227ENST00000489979 OR52P1PQ8NH57 321 aa11.97□□□□□ -0.49
VARS-227ENST00000489979 ZNF747Q9BV97 191 aa11.97□□□□□ -0.49
VARS-227ENST00000489979 ZNF416Q9BWM5 594 aa11.97□□□□□ -0.49
VARS-227ENST00000489979 ZNF696Q9H7X3 374 aa11.97□□□□□ -0.49
VARS-227ENST00000489979 E9PBE3 544 aa11.96□□□□□ -0.49
VARS-227ENST00000489979 M0R3G1 203 aa11.96□□□□□ -0.49
VARS-227ENST00000489979 ITM2AO43736 263 aa11.96□□□□□ -0.49
VARS-227ENST00000489979 BPGMP07738 259 aa11.96□□□□□ -0.49
VARS-227ENST00000489979 NUDT17P0C025 328 aa11.96□□□□□ -0.49
VARS-227ENST00000489979 ANPEPP15144 967 aa11.96□□□□□ -0.49
VARS-227ENST00000489979 ZNF14P17017 642 aaPredicted RBP11.96□□□□□ -0.49
VARS-227ENST00000489979 ADRA2CP18825 462 aa11.96□□□□□ -0.49
VARS-227ENST00000489979 CDKN2CP42773 168 aa11.96□□□□□ -0.49
VARS-227ENST00000489979 NME5P56597 212 aa11.96□□□□□ -0.49
VARS-227ENST00000489979 MRPS11P82912 194 aaKnown RBP11.96□□□□□ -0.49
VARS-227ENST00000489979 EGR4Q05215 589 aa11.96□□□□□ -0.49
VARS-227ENST00000489979 CHI3L2Q15782 390 aa11.96□□□□□ -0.49
VARS-227ENST00000489979 GSG1Q2KHT4 349 aa11.96□□□□□ -0.49
VARS-227ENST00000489979 DPY19L1Q2PZI1 675 aa11.96□□□□□ -0.49
VARS-227ENST00000489979 GKAP1Q5VSY0 366 aaPredicted RBP11.96□□□□□ -0.49
VARS-227ENST00000489979 ACSM5Q6NUN0 579 aa11.96□□□□□ -0.49
VARS-227ENST00000489979 ZNF621Q6ZSS3 439 aa11.96□□□□□ -0.49
VARS-227ENST00000489979 C1QL2Q7Z5L3 287 aa11.96□□□□□ -0.49
VARS-227ENST00000489979 SERPINA11Q86U17 422 aa11.96□□□□□ -0.49
VARS-227ENST00000489979 PIK3C3Q8NEB9 887 aa11.96□□□□□ -0.49
VARS-227ENST00000489979 KTI12Q96EK9 354 aaPredicted RBP11.96□□□□□ -0.49
VARS-227ENST00000489979 ZNF75AQ96N20 296 aa11.96□□□□□ -0.49
VARS-227ENST00000489979 OR2M2Q96R28 347 aa11.96□□□□□ -0.49
VARS-227ENST00000489979 PANX1Q96RD7 426 aa11.96□□□□□ -0.49
VARS-227ENST00000489979 TMPRSS13Q9BYE2 586 aa11.96□□□□□ -0.49
VARS-227ENST00000489979 ZNF665Q9H7R5 613 aa11.96□□□□□ -0.49
VARS-227ENST00000489979 SLC52A3Q9NQ40 469 aa11.96□□□□□ -0.49
VARS-227ENST00000489979 DUSP13Q9UII6 198 aa11.96□□□□□ -0.49
VARS-227ENST00000489979 ZNF443Q9Y2A4 671 aaPredicted RBP11.96□□□□□ -0.49
VARS-227ENST00000489979 ARHGAP32A7KAX9 2087 aa11.95□□□□□ -0.5
VARS-227ENST00000489979 M0R082 166 aa11.95□□□□□ -0.5
VARS-227ENST00000489979 AIM2O14862 343 aa11.95□□□□□ -0.5
VARS-227ENST00000489979 MPZL1O95297 269 aa11.95□□□□□ -0.5
VARS-227ENST00000489979 BCL10O95999 233 aa11.95□□□□□ -0.5
VARS-227ENST00000489979 PTDSS1P48651 473 aaKnown RBP11.95□□□□□ -0.5
VARS-227ENST00000489979 RPS23P62266 143 aaKnown RBP11.95□□□□□ -0.5
VARS-227ENST00000489979 UBA52P62987 128 aaKnown RBP11.95□□□□□ -0.5
VARS-227ENST00000489979 GALK2Q01415 458 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms