RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 SLC17A5Q9NRA2 495 aa16.79■□□□□ 0.28
EPHB4-207ENST00000489808 BEX4Q9NWD9 120 aaPredicted RBP16.79■□□□□ 0.28
EPHB4-207ENST00000489808 NPAP1Q9NZP6 1156 aa16.79■□□□□ 0.28
EPHB4-207ENST00000489808 RNF115Q9Y4L5 304 aa16.79■□□□□ 0.28
EPHB4-207ENST00000489808 A0A1W2PR80 420 aa16.78■□□□□ 0.28
EPHB4-207ENST00000489808 ZNF587BE7ETH6 402 aa16.78■□□□□ 0.28
EPHB4-207ENST00000489808 SLC43A1O75387 559 aa16.78■□□□□ 0.28
EPHB4-207ENST00000489808 DCTN3O75935 186 aa16.78■□□□□ 0.28
EPHB4-207ENST00000489808 THRBP10828 461 aa16.78■□□□□ 0.28
EPHB4-207ENST00000489808 CDH2P19022 906 aaPredicted RBP16.78■□□□□ 0.28
EPHB4-207ENST00000489808 AHCYP23526 432 aa16.78■□□□□ 0.28
EPHB4-207ENST00000489808 PUDPQ08623 228 aa16.78■□□□□ 0.28
EPHB4-207ENST00000489808 C1QTNF12Q5T7M4 302 aa16.78■□□□□ 0.28
EPHB4-207ENST00000489808 ADAM5Q6NVV9 412 aa16.78■□□□□ 0.28
EPHB4-207ENST00000489808 LINGO2Q7L985 606 aa16.78■□□□□ 0.28
EPHB4-207ENST00000489808 PXKQ7Z7A4 578 aa16.78■□□□□ 0.28
EPHB4-207ENST00000489808 VTCN1Q7Z7D3 282 aa16.78■□□□□ 0.28
EPHB4-207ENST00000489808 AKAP1Q92667 903 aaKnown RBP eCLIP16.78■□□□□ 0.28
EPHB4-207ENST00000489808 PIGTQ969N2 578 aa16.78■□□□□ 0.28
EPHB4-207ENST00000489808 PIP5K1AQ99755 562 aa16.78■□□□□ 0.28
EPHB4-207ENST00000489808 FKRPQ9H9S5 495 aa16.78■□□□□ 0.28
EPHB4-207ENST00000489808 SPAG4Q9NPE6 437 aa16.78■□□□□ 0.28
EPHB4-207ENST00000489808 MEPEQ9NQ76 525 aaPredicted RBP16.78■□□□□ 0.28
EPHB4-207ENST00000489808 NANSQ9NR45 359 aa16.78■□□□□ 0.28
EPHB4-207ENST00000489808 ARL8BQ9NVJ2 186 aa16.78■□□□□ 0.28
EPHB4-207ENST00000489808 TAGLN3Q9UI15 199 aa16.78■□□□□ 0.28
EPHB4-207ENST00000489808 NOX1Q9Y5S8 564 aa16.78■□□□□ 0.28
EPHB4-207ENST00000489808 PRRC2AP48634 2157 aaKnown RBP16.78■□□□□ 0.28
EPHB4-207ENST00000489808 RPL36A-HNRNPH2H7BZ11 118 aa16.77■□□□□ 0.28
EPHB4-207ENST00000489808 KPNA4O00629 521 aaPredicted RBP16.77■□□□□ 0.28
EPHB4-207ENST00000489808 HS3ST1O14792 307 aa16.77■□□□□ 0.28
EPHB4-207ENST00000489808 CLOCKO15516 846 aa16.77■□□□□ 0.28
EPHB4-207ENST00000489808 OR6A2O95222 327 aa16.77■□□□□ 0.28
EPHB4-207ENST00000489808 ADORA3P0DMS8 318 aa16.77■□□□□ 0.28
EPHB4-207ENST00000489808 RBM34P42696 430 aaKnown RBP16.77■□□□□ 0.28
EPHB4-207ENST00000489808 ZP4Q12836 540 aa16.77■□□□□ 0.28
EPHB4-207ENST00000489808 TMEM123Q8N131 208 aa16.77■□□□□ 0.28
EPHB4-207ENST00000489808 LRRC17Q8N6Y2 441 aa16.77■□□□□ 0.28
EPHB4-207ENST00000489808 ZNF611Q8N823 705 aa16.77■□□□□ 0.28
EPHB4-207ENST00000489808 ANKK1Q8NFD2 765 aa16.77■□□□□ 0.28
EPHB4-207ENST00000489808 TMEM255BQ8WV15 326 aa16.77■□□□□ 0.28
EPHB4-207ENST00000489808 TXNDC15Q96J42 360 aa16.77■□□□□ 0.28
EPHB4-207ENST00000489808 HS6ST2Q96MM7 605 aa16.77■□□□□ 0.28
EPHB4-207ENST00000489808 OR2M2Q96R28 347 aa16.77■□□□□ 0.28
EPHB4-207ENST00000489808 TAS2R5Q9NYW4 299 aa16.77■□□□□ 0.28
EPHB4-207ENST00000489808 ADA2Q9NZK5 511 aa16.77■□□□□ 0.28
EPHB4-207ENST00000489808 ZNF229Q9UJW7 825 aa16.77■□□□□ 0.28
EPHB4-207ENST00000489808 A4GNTQ9UNA3 340 aa16.77■□□□□ 0.28
EPHB4-207ENST00000489808 AKAP8O43823 692 aaKnown RBP16.76■□□□□ 0.27
EPHB4-207ENST00000489808 ZNF682O95780 498 aa16.76■□□□□ 0.27
EPHB4-207ENST00000489808 SERPINA1P01009 418 aa16.76■□□□□ 0.27
EPHB4-207ENST00000489808 IGF2P01344 180 aa16.76■□□□□ 0.27
EPHB4-207ENST00000489808 MT-ND1P03886 318 aa16.76■□□□□ 0.27
EPHB4-207ENST00000489808 HIST1H2ABP04908 130 aa16.76■□□□□ 0.27
EPHB4-207ENST00000489808 ASAH2BP0C7U1 165 aa16.76■□□□□ 0.27
EPHB4-207ENST00000489808 NCK1P16333 377 aa16.76■□□□□ 0.27
EPHB4-207ENST00000489808 ZNF83P51522 516 aa16.76■□□□□ 0.27
EPHB4-207ENST00000489808 UGT2B15P54855 530 aa16.76■□□□□ 0.27
EPHB4-207ENST00000489808 PRPS1P60891 318 aa16.76■□□□□ 0.27
EPHB4-207ENST00000489808 ROR2Q01974 943 aaKnown RBP16.76■□□□□ 0.27
EPHB4-207ENST00000489808 POU3F1Q03052 451 aaPredicted RBP16.76■□□□□ 0.27
EPHB4-207ENST00000489808 ST3GAL3Q11203 375 aa16.76■□□□□ 0.27
EPHB4-207ENST00000489808 FOXD4Q12950 439 aaPredicted RBP16.76■□□□□ 0.27
EPHB4-207ENST00000489808 GLYATQ6IB77 296 aa16.76■□□□□ 0.27
EPHB4-207ENST00000489808 HMBOX1Q6NT76 420 aa16.76■□□□□ 0.27
EPHB4-207ENST00000489808 KLHL17Q6TDP4 642 aa16.76■□□□□ 0.27
EPHB4-207ENST00000489808 HIST3H2AQ7L7L0 130 aa16.76■□□□□ 0.27
EPHB4-207ENST00000489808 PIK3C3Q8NEB9 887 aa16.76■□□□□ 0.27
EPHB4-207ENST00000489808 OR1K1Q8NGR3 316 aa16.76■□□□□ 0.27
EPHB4-207ENST00000489808 TMEM239Q8WW34 195 aa16.76■□□□□ 0.27
EPHB4-207ENST00000489808 BCL2L2Q92843 193 aaPredicted RBP16.76■□□□□ 0.27
EPHB4-207ENST00000489808 HIST1H2ACQ93077 130 aa16.76■□□□□ 0.27
EPHB4-207ENST00000489808 LRR1Q96L50 414 aa16.76■□□□□ 0.27
EPHB4-207ENST00000489808 ALKBH3Q96Q83 286 aaPredicted RBP16.76■□□□□ 0.27
EPHB4-207ENST00000489808 EMC6Q9BV81 110 aa16.76■□□□□ 0.27
EPHB4-207ENST00000489808 C1QTNF6Q9BXI9 259 aa16.76■□□□□ 0.27
EPHB4-207ENST00000489808 MED29Q9NX70 200 aa16.76■□□□□ 0.27
EPHB4-207ENST00000489808 FAM53CQ9NYF3 392 aa16.76■□□□□ 0.27
EPHB4-207ENST00000489808 AMDHD2Q9Y303 409 aa16.76■□□□□ 0.27
EPHB4-207ENST00000489808 SNX13Q9Y5W8 968 aa16.76■□□□□ 0.27
EPHB4-207ENST00000489808 ROS1P08922 2347 aa16.76■□□□□ 0.27
EPHB4-207ENST00000489808 SLC35F4A4IF30 521 aa16.75■□□□□ 0.27
EPHB4-207ENST00000489808 ZNF726A6NNF4 738 aa16.75■□□□□ 0.27
EPHB4-207ENST00000489808 C11orf98E9PRG8 122 aa16.75■□□□□ 0.27
EPHB4-207ENST00000489808 IFNW1P05000 195 aa16.75■□□□□ 0.27
EPHB4-207ENST00000489808 IFNA8P32881 189 aa16.75■□□□□ 0.27
EPHB4-207ENST00000489808 YAP1P46937 504 aaKnown RBP16.75■□□□□ 0.27
EPHB4-207ENST00000489808 ZNF672Q499Z4 452 aaPredicted RBP16.75■□□□□ 0.27
EPHB4-207ENST00000489808 HIKESHIQ53FT3 197 aa16.75■□□□□ 0.27
EPHB4-207ENST00000489808 IFI44LQ53G44 452 aa16.75■□□□□ 0.27
EPHB4-207ENST00000489808 TMEM108Q6UXF1 575 aa16.75■□□□□ 0.27
EPHB4-207ENST00000489808 FKBP9P1Q75LS8 142 aa16.75■□□□□ 0.27
EPHB4-207ENST00000489808 SLC46A3Q7Z3Q1 461 aa16.75■□□□□ 0.27
EPHB4-207ENST00000489808 C20orf196Q8IYI0 205 aa16.75■□□□□ 0.27
EPHB4-207ENST00000489808 GPR137CQ8N3F9 429 aa16.75■□□□□ 0.27
EPHB4-207ENST00000489808 PFN4Q8NHR9 129 aa16.75■□□□□ 0.27
EPHB4-207ENST00000489808 IGFBPL1Q8WX77 278 aa16.75■□□□□ 0.27
EPHB4-207ENST00000489808 GEMIN6Q8WXD5 167 aaKnown RBP16.75■□□□□ 0.27
EPHB4-207ENST00000489808 NEUROG1Q92886 237 aa16.75■□□□□ 0.27
EPHB4-207ENST00000489808 FAM162AQ96A26 154 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms