RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-229ENST00000489583 SNX32Q86XE0 403 aa16.89■□□□□ 0.29
APTX-229ENST00000489583 RFLNBQ8N5W9 214 aa16.89■□□□□ 0.29
APTX-229ENST00000489583 LINC01356Q8N9X3 169 aa16.89■□□□□ 0.29
APTX-229ENST00000489583 B3GAT2Q9NPZ5 323 aa16.89■□□□□ 0.29
APTX-229ENST00000489583 CRNNQ9UBG3 495 aaPredicted RBP16.89■□□□□ 0.29
APTX-229ENST00000489583 USP22Q9UPT9 525 aa16.89■□□□□ 0.29
APTX-229ENST00000489583 AIM2O14862 343 aa16.88■□□□□ 0.29
APTX-229ENST00000489583 STAMBPO95630 424 aa16.88■□□□□ 0.29
APTX-229ENST00000489583 ALDOCP09972 364 aaKnown RBP16.88■□□□□ 0.29
APTX-229ENST00000489583 TROVE2P10155 538 aaKnown RBP eCLIP16.88■□□□□ 0.29
APTX-229ENST00000489583 PNMTP11086 282 aa16.88■□□□□ 0.29
APTX-229ENST00000489583 IFNGR1P15260 489 aa16.88■□□□□ 0.29
APTX-229ENST00000489583 EPHA3P29320 983 aa16.88■□□□□ 0.29
APTX-229ENST00000489583 ARF1P84077 181 aaKnown RBP16.88■□□□□ 0.29
APTX-229ENST00000489583 LGALS3BPQ08380 585 aa16.88■□□□□ 0.29
APTX-229ENST00000489583 DAG1Q14118 895 aa16.88■□□□□ 0.29
APTX-229ENST00000489583 PDCD4Q53EL6 469 aaKnown RBP16.88■□□□□ 0.29
APTX-229ENST00000489583 SVOPLQ8N434 492 aa16.88■□□□□ 0.29
APTX-229ENST00000489583 RNF217Q8TC41 542 aa16.88■□□□□ 0.29
APTX-229ENST00000489583 SLC38A5Q8WUX1 472 aa16.88■□□□□ 0.29
APTX-229ENST00000489583 OXGR1Q96P68 337 aa16.88■□□□□ 0.29
APTX-229ENST00000489583 TPT1P8Q9HAU6 139 aa16.88■□□□□ 0.29
APTX-229ENST00000489583 CRLF2Q9HC73 371 aa16.88■□□□□ 0.29
APTX-229ENST00000489583 TMEFF2Q9UIK5 374 aaPredicted RBP16.88■□□□□ 0.29
APTX-229ENST00000489583 CMAHPQ9Y471 501 aa16.88■□□□□ 0.29
APTX-229ENST00000489583 SDHDO14521 159 aa16.87■□□□□ 0.29
APTX-229ENST00000489583 IGKV3-15P01624 115 aa16.87■□□□□ 0.29
APTX-229ENST00000489583 IGLV1-44P01699 117 aa16.87■□□□□ 0.29
APTX-229ENST00000489583 NQO1P15559 274 aaKnown RBP16.87■□□□□ 0.29
APTX-229ENST00000489583 THBS4P35443 961 aa16.87■□□□□ 0.29
APTX-229ENST00000489583 NCALDP61601 193 aa16.87■□□□□ 0.29
APTX-229ENST00000489583 ADRM1Q16186 407 aa16.87■□□□□ 0.29
APTX-229ENST00000489583 NET1Q7Z628 596 aaPredicted RBP16.87■□□□□ 0.29
APTX-229ENST00000489583 SERPINA11Q86U17 422 aa16.87■□□□□ 0.29
APTX-229ENST00000489583 EPHX4Q8IUS5 362 aa16.87■□□□□ 0.29
APTX-229ENST00000489583 CLIP4Q8N3C7 705 aa16.87■□□□□ 0.29
APTX-229ENST00000489583 UBASH3BQ8TF42 649 aa16.87■□□□□ 0.29
APTX-229ENST00000489583 SLC38A4Q969I6 547 aa16.87■□□□□ 0.29
APTX-229ENST00000489583 SLC35B4Q969S0 331 aa16.87■□□□□ 0.29
APTX-229ENST00000489583 TMEM19Q96HH6 336 aa16.87■□□□□ 0.29
APTX-229ENST00000489583 GPR45Q9Y5Y3 372 aa16.87■□□□□ 0.29
APTX-229ENST00000489583 DSPPQ9NZW4 1301 aa16.87■□□□□ 0.29
APTX-229ENST00000489583 LRP5LA4QPB2 252 aa16.86■□□□□ 0.29
APTX-229ENST00000489583 RPL36A-HNRNPH2H7BZ11 118 aa16.86■□□□□ 0.29
APTX-229ENST00000489583 POLR3GO15318 223 aaPredicted RBP16.86■□□□□ 0.29
APTX-229ENST00000489583 C1QCP02747 245 aa16.86■□□□□ 0.29
APTX-229ENST00000489583 ZCCHC18P0CG32 403 aa16.86■□□□□ 0.29
APTX-229ENST00000489583 GIFP27352 417 aa16.86■□□□□ 0.29
APTX-229ENST00000489583 IL12AP29459 219 aa16.86■□□□□ 0.29
APTX-229ENST00000489583 CALCRP30988 508 aa16.86■□□□□ 0.29
APTX-229ENST00000489583 LSP1P33241 339 aa16.86■□□□□ 0.29
APTX-229ENST00000489583 P2RY4P51582 365 aa16.86■□□□□ 0.29
APTX-229ENST00000489583 AQP5P55064 265 aa16.86■□□□□ 0.29
APTX-229ENST00000489583 SNTB2Q13425 540 aaKnown RBP16.86■□□□□ 0.29
APTX-229ENST00000489583 MFSD13AQ14CX5 517 aa16.86■□□□□ 0.29
APTX-229ENST00000489583 CEACAM16Q2WEN9 425 aa16.86■□□□□ 0.29
APTX-229ENST00000489583 REP15Q6BDI9 236 aa16.86■□□□□ 0.29
APTX-229ENST00000489583 EPGNQ6UW88 154 aa16.86■□□□□ 0.29
APTX-229ENST00000489583 MSANTD1Q6ZTZ1 278 aa16.86■□□□□ 0.29
APTX-229ENST00000489583 KDM8Q8N371 416 aa16.86■□□□□ 0.29
APTX-229ENST00000489583 ZNF786Q8N393 782 aa16.86■□□□□ 0.29
APTX-229ENST00000489583 MAELQ96JY0 434 aaKnown RBP16.86■□□□□ 0.29
APTX-229ENST00000489583 SNX18Q96RF0 628 aa16.86■□□□□ 0.29
APTX-229ENST00000489583 WDR55Q9H6Y2 383 aaPredicted RBP16.86■□□□□ 0.29
APTX-229ENST00000489583 GPR35Q9HC97 309 aa16.86■□□□□ 0.29
APTX-229ENST00000489583 SLC13A4Q9UKG4 626 aa16.86■□□□□ 0.29
APTX-229ENST00000489583 ADRA2AP08913 450 aa16.85■□□□□ 0.29
APTX-229ENST00000489583 CD79AP11912 226 aa16.85■□□□□ 0.29
APTX-229ENST00000489583 PRG2P13727 222 aa16.85■□□□□ 0.29
APTX-229ENST00000489583 GALK2Q01415 458 aa16.85■□□□□ 0.29
APTX-229ENST00000489583 TRMT5Q32P41 509 aaKnown RBP16.85■□□□□ 0.29
APTX-229ENST00000489583 SLC9B1Q4ZJI4 515 aa16.85■□□□□ 0.29
APTX-229ENST00000489583 RPS26P11Q5JNZ5 115 aaPredicted RBP16.85■□□□□ 0.29
APTX-229ENST00000489583 FAM69AQ5T7M9 428 aa16.85■□□□□ 0.29
APTX-229ENST00000489583 GKAP1Q5VSY0 366 aaPredicted RBP16.85■□□□□ 0.29
APTX-229ENST00000489583 KRT80Q6KB66 452 aa16.85■□□□□ 0.29
APTX-229ENST00000489583 H1FNTQ75WM6 255 aaPredicted RBP16.85■□□□□ 0.29
APTX-229ENST00000489583 MAVSQ7Z434 540 aa16.85■□□□□ 0.29
APTX-229ENST00000489583 KRT73Q86Y46 540 aa16.85■□□□□ 0.29
APTX-229ENST00000489583 UEVLDQ8IX04 471 aa16.85■□□□□ 0.29
APTX-229ENST00000489583 BBS10Q8TAM1 723 aa16.85■□□□□ 0.29
APTX-229ENST00000489583 DNAJA4Q8WW22 397 aaPredicted RBP16.85■□□□□ 0.29
APTX-229ENST00000489583 EPYCQ99645 322 aa16.85■□□□□ 0.29
APTX-229ENST00000489583 SPATA5L1Q9BVQ7 753 aa16.85■□□□□ 0.29
APTX-229ENST00000489583 MS4A5Q9H3V2 200 aa16.85■□□□□ 0.29
APTX-229ENST00000489583 NPHS2Q9NP85 383 aa16.85■□□□□ 0.29
APTX-229ENST00000489583 TCF7L2Q9NQB0 619 aa16.85■□□□□ 0.29
APTX-229ENST00000489583 FGFR1OP2Q9NVK5 253 aa16.85■□□□□ 0.29
APTX-229ENST00000489583 YLPM1P49750 1951 aaKnown RBP16.85■□□□□ 0.29
APTX-229ENST00000489583 IGHV2OR16-5A0A0B4J2B6 119 aa16.84■□□□□ 0.29
APTX-229ENST00000489583 ZNF99A8MXY4 864 aaPredicted RBP16.84■□□□□ 0.29
APTX-229ENST00000489583 TMEM229AB2RXF0 380 aa16.84■□□□□ 0.29
APTX-229ENST00000489583 NPIPB7O75200 414 aa16.84■□□□□ 0.29
APTX-229ENST00000489583 RPS23P62266 143 aaKnown RBP16.84■□□□□ 0.29
APTX-229ENST00000489583 SRSF2Q01130 221 aaKnown RBP16.84■□□□□ 0.29
APTX-229ENST00000489583 LINGO2Q7L985 606 aa16.84■□□□□ 0.29
APTX-229ENST00000489583 MDP1Q86V88 176 aa16.84■□□□□ 0.29
APTX-229ENST00000489583 STON2Q8WXE9 905 aa16.84■□□□□ 0.29
APTX-229ENST00000489583 CCDC28BQ9BUN5 200 aa16.84■□□□□ 0.29
APTX-229ENST00000489583 ASPNQ9BXN1 380 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms