RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 AQP7P3A6NL99 342 aa18.71■□□□□ 0.59
SND1-214ENST00000489417 PRR23D1E9PI22 279 aaPredicted RBP18.71■□□□□ 0.59
SND1-214ENST00000489417 TFECO14948 347 aaPredicted RBP18.71■□□□□ 0.59
SND1-214ENST00000489417 PRODHO43272 600 aa18.71■□□□□ 0.59
SND1-214ENST00000489417 DNPH1O43598 174 aa18.71■□□□□ 0.59
SND1-214ENST00000489417 EIF1BO60739 113 aaKnown RBP18.71■□□□□ 0.59
SND1-214ENST00000489417 SERPINI2O75830 405 aa18.71■□□□□ 0.59
SND1-214ENST00000489417 PLGP00747 810 aaPredicted RBP18.71■□□□□ 0.59
SND1-214ENST00000489417 PRR23D2P0DMB1 279 aaPredicted RBP18.71■□□□□ 0.59
SND1-214ENST00000489417 ZNF24P17028 368 aa18.71■□□□□ 0.59
SND1-214ENST00000489417 PAICSP22234 425 aaKnown RBP18.71■□□□□ 0.59
SND1-214ENST00000489417 P2RY4P51582 365 aa18.71■□□□□ 0.59
SND1-214ENST00000489417 KRR1Q13601 381 aaKnown RBP18.71■□□□□ 0.59
SND1-214ENST00000489417 APOFQ13790 326 aa18.71■□□□□ 0.59
SND1-214ENST00000489417 NXNL2Q5VZ03 156 aa18.71■□□□□ 0.59
SND1-214ENST00000489417 HBMQ6B0K9 141 aa18.71■□□□□ 0.59
SND1-214ENST00000489417 PLBD1Q6P4A8 553 aa18.71■□□□□ 0.59
SND1-214ENST00000489417 UBQLNLQ8IYU4 475 aa18.71■□□□□ 0.59
SND1-214ENST00000489417 KDM8Q8N371 416 aa18.71■□□□□ 0.59
SND1-214ENST00000489417 RBMXL3Q8N7X1 1067 aaKnown RBP18.71■□□□□ 0.59
SND1-214ENST00000489417 SDR9C7Q8NEX9 313 aa18.71■□□□□ 0.59
SND1-214ENST00000489417 IPCEF1Q8WWN9 437 aaPredicted RBP18.71■□□□□ 0.59
SND1-214ENST00000489417 SGCDQ92629 289 aa18.71■□□□□ 0.59
SND1-214ENST00000489417 GGHQ92820 318 aa18.71■□□□□ 0.59
SND1-214ENST00000489417 OTULINQ96BN8 352 aa18.71■□□□□ 0.59
SND1-214ENST00000489417 ADGRG7Q96K78 797 aa18.71■□□□□ 0.59
SND1-214ENST00000489417 RHNO1Q9BSD3 238 aa18.71■□□□□ 0.59
SND1-214ENST00000489417 NAA11Q9BSU3 229 aaPredicted RBP18.71■□□□□ 0.59
SND1-214ENST00000489417 MRPS26Q9BYN8 205 aaKnown RBP18.71■□□□□ 0.59
SND1-214ENST00000489417 TXNIPQ9H3M7 391 aa18.71■□□□□ 0.59
SND1-214ENST00000489417 DUSP21Q9H596 190 aa18.71■□□□□ 0.59
SND1-214ENST00000489417 RPL36Q9Y3U8 105 aaKnown RBP18.71■□□□□ 0.59
SND1-214ENST00000489417 LIPGQ9Y5X9 500 aa18.71■□□□□ 0.59
SND1-214ENST00000489417 A0A087WXM4 84 aa18.7■□□□□ 0.58
SND1-214ENST00000489417 MED19A0JLT2 244 aaPredicted RBP18.7■□□□□ 0.58
SND1-214ENST00000489417 SNTNA6NMZ2 147 aa18.7■□□□□ 0.58
SND1-214ENST00000489417 CLCA1A8K7I4 914 aa18.7■□□□□ 0.58
SND1-214ENST00000489417 H0YC42 278 aa18.7■□□□□ 0.58
SND1-214ENST00000489417 ACVR2AP27037 513 aa18.7■□□□□ 0.58
SND1-214ENST00000489417 LHX2P50458 406 aa18.7■□□□□ 0.58
SND1-214ENST00000489417 SUCLG1P53597 346 aaKnown RBP18.7■□□□□ 0.58
SND1-214ENST00000489417 RPL27P61353 136 aaKnown RBP18.7■□□□□ 0.58
SND1-214ENST00000489417 SLC35A2P78381 396 aa18.7■□□□□ 0.58
SND1-214ENST00000489417 ZNF91Q05481 1191 aa18.7■□□□□ 0.58
SND1-214ENST00000489417 ACKR1Q16570 336 aa18.7■□□□□ 0.58
SND1-214ENST00000489417 PDSS1Q5T2R2 415 aa18.7■□□□□ 0.58
SND1-214ENST00000489417 ZNF773Q6PK81 442 aa18.7■□□□□ 0.58
SND1-214ENST00000489417 AHSA2Q719I0 299 aa18.7■□□□□ 0.58
SND1-214ENST00000489417 PXKQ7Z7A4 578 aa18.7■□□□□ 0.58
SND1-214ENST00000489417 JAZF1Q86VZ6 243 aa18.7■□□□□ 0.58
SND1-214ENST00000489417 GID4Q8IVV7 300 aa18.7■□□□□ 0.58
SND1-214ENST00000489417 CYB561A3Q8NBI2 242 aa18.7■□□□□ 0.58
SND1-214ENST00000489417 BBS1Q8NFJ9 593 aa18.7■□□□□ 0.58
SND1-214ENST00000489417 RFKQ969G6 155 aa18.7■□□□□ 0.58
SND1-214ENST00000489417 ABTB1Q969K4 478 aaPredicted RBP18.7■□□□□ 0.58
SND1-214ENST00000489417 ZHX1-C8orf76Q96EF9 292 aa18.7■□□□□ 0.58
SND1-214ENST00000489417 ABHD17AQ96GS6 310 aa18.7■□□□□ 0.58
SND1-214ENST00000489417 MED20Q9H944 212 aa18.7■□□□□ 0.58
SND1-214ENST00000489417 CCNB1IP1Q9NPC3 277 aa18.7■□□□□ 0.58
SND1-214ENST00000489417 FKBP14Q9NWM8 211 aa18.7■□□□□ 0.58
SND1-214ENST00000489417 H2AFY2Q9P0M6 372 aaPredicted RBP18.7■□□□□ 0.58
SND1-214ENST00000489417 TNRC6AQ8NDV7 1962 aaKnown RBP18.7■□□□□ 0.58
SND1-214ENST00000489417 TRGV5A0A0B4J1U4 118 aa18.69■□□□□ 0.58
SND1-214ENST00000489417 EFCAB10A6NFE3 127 aa18.69■□□□□ 0.58
SND1-214ENST00000489417 NPIPB13A6NJU9 1138 aa18.69■□□□□ 0.58
SND1-214ENST00000489417 ZNF814B7Z6K7 855 aa18.69■□□□□ 0.58
SND1-214ENST00000489417 NPIPB4C9JG80 1138 aa18.69■□□□□ 0.58
SND1-214ENST00000489417 M0R3G1 203 aa18.69■□□□□ 0.58
SND1-214ENST00000489417 ACTL6AO96019 429 aa18.69■□□□□ 0.58
SND1-214ENST00000489417 ITGB2P05107 769 aa18.69■□□□□ 0.58
SND1-214ENST00000489417 HLA-DOBP13765 273 aa18.69■□□□□ 0.58
SND1-214ENST00000489417 ATP6V1B1P15313 513 aa18.69■□□□□ 0.58
SND1-214ENST00000489417 AGFG1P52594 562 aaKnown RBP18.69■□□□□ 0.58
SND1-214ENST00000489417 CDH11P55287 796 aa18.69■□□□□ 0.58
SND1-214ENST00000489417 CARD18P57730 90 aa18.69■□□□□ 0.58
SND1-214ENST00000489417 RAC3P60763 192 aa18.69■□□□□ 0.58
SND1-214ENST00000489417 H3F3AP84243 136 aa18.69■□□□□ 0.58
SND1-214ENST00000489417 BLMHQ13867 455 aa18.69■□□□□ 0.58
SND1-214ENST00000489417 MESTQ5EB52 335 aa18.69■□□□□ 0.58
SND1-214ENST00000489417 NIPAL3Q6P499 406 aa18.69■□□□□ 0.58
SND1-214ENST00000489417 ASB18Q6ZVZ8 466 aa18.69■□□□□ 0.58
SND1-214ENST00000489417 NEIL3Q8TAT5 605 aa18.69■□□□□ 0.58
SND1-214ENST00000489417 ZNF519Q8TB69 540 aa18.69■□□□□ 0.58
SND1-214ENST00000489417 HCAR1Q9BXC0 346 aa18.69■□□□□ 0.58
SND1-214ENST00000489417 MFRPQ9BY79 579 aa18.69■□□□□ 0.58
SND1-214ENST00000489417 SRXN1Q9BYN0 137 aa18.69■□□□□ 0.58
SND1-214ENST00000489417 LDAHQ9H6V9 325 aa18.69■□□□□ 0.58
SND1-214ENST00000489417 EXO5Q9H790 373 aa18.69■□□□□ 0.58
SND1-214ENST00000489417 CNOT2Q9NZN8 540 aaKnown RBP18.69■□□□□ 0.58
SND1-214ENST00000489417 B3GAT1Q9P2W7 334 aa18.69■□□□□ 0.58
SND1-214ENST00000489417 ERVK-18Q9QC07 812 aa18.69■□□□□ 0.58
SND1-214ENST00000489417 NOX1Q9Y5S8 564 aa18.69■□□□□ 0.58
SND1-214ENST00000489417 NPIPA5E9PKD4 350 aa18.68■□□□□ 0.58
SND1-214ENST00000489417 DBTP11182 482 aaKnown RBP18.68■□□□□ 0.58
SND1-214ENST00000489417 KLK2P20151 261 aa18.68■□□□□ 0.58
SND1-214ENST00000489417 ACVR1BP36896 505 aa18.68■□□□□ 0.58
SND1-214ENST00000489417 CDKN2AP42771 156 aaKnown RBP18.68■□□□□ 0.58
SND1-214ENST00000489417 SLC15A1P46059 708 aa18.68■□□□□ 0.58
SND1-214ENST00000489417 DAP3P51398 398 aaKnown RBP18.68■□□□□ 0.58
SND1-214ENST00000489417 CLDN15P56746 228 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms