RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 STAG3L3P0CL85 134 aa3.15□□□□□ -1.91
XRN1-213ENST00000489241 ZNF24P17028 368 aa3.15□□□□□ -1.91
XRN1-213ENST00000489241 TBPP20226 339 aa3.15□□□□□ -1.91
XRN1-213ENST00000489241 HSD17B2P37059 387 aa3.15□□□□□ -1.91
XRN1-213ENST00000489241 PEX19P40855 299 aa3.15□□□□□ -1.91
XRN1-213ENST00000489241 KIR2DS4P43632 304 aa3.15□□□□□ -1.91
XRN1-213ENST00000489241 SLC26A2P50443 739 aa3.15□□□□□ -1.91
XRN1-213ENST00000489241 FBXW4P57775 412 aa3.15□□□□□ -1.91
XRN1-213ENST00000489241 LY6G6FQ5SQ64 297 aa3.15□□□□□ -1.91
XRN1-213ENST00000489241 TIGD3Q6B0B8 471 aa3.15□□□□□ -1.91
XRN1-213ENST00000489241 TFAP2EQ6VUC0 442 aa3.15□□□□□ -1.91
XRN1-213ENST00000489241 Q6ZN92 141 aa3.15□□□□□ -1.91
XRN1-213ENST00000489241 HSD17B13Q7Z5P4 300 aaPredicted RBP3.15□□□□□ -1.91
XRN1-213ENST00000489241 TMCO2Q7Z6W1 182 aaPredicted RBP3.15□□□□□ -1.91
XRN1-213ENST00000489241 SCD5Q86SK9 330 aa3.15□□□□□ -1.91
XRN1-213ENST00000489241 MFSD6LQ8IWD5 586 aa3.15□□□□□ -1.91
XRN1-213ENST00000489241 FBXO16Q8IX29 292 aaPredicted RBP3.15□□□□□ -1.91
XRN1-213ENST00000489241 GPD1LQ8N335 351 aa3.15□□□□□ -1.91
XRN1-213ENST00000489241 MS4A15Q8N5U1 240 aa3.15□□□□□ -1.91
XRN1-213ENST00000489241 TMEM252Q8N6L7 170 aa3.15□□□□□ -1.91
XRN1-213ENST00000489241 CCDC71LQ8N9Z2 235 aa3.15□□□□□ -1.91
XRN1-213ENST00000489241 OR9A1PQ8NGU1 263 aa3.15□□□□□ -1.91
XRN1-213ENST00000489241 MRAPQ8TCY5 172 aa3.15□□□□□ -1.91
XRN1-213ENST00000489241 OR1E3Q8WZA6 343 aa3.15□□□□□ -1.91
XRN1-213ENST00000489241 NRGNQ92686 78 aa3.15□□□□□ -1.91
XRN1-213ENST00000489241 HIST1H4GQ99525 98 aa3.15□□□□□ -1.91
XRN1-213ENST00000489241 ATP5SQ99766 215 aa3.15□□□□□ -1.91
XRN1-213ENST00000489241 P2RY13Q9BPV8 354 aa3.15□□□□□ -1.91
XRN1-213ENST00000489241 CNPY3Q9BT09 278 aa3.15□□□□□ -1.91
XRN1-213ENST00000489241 TMEM59Q9BXS4 323 aa3.15□□□□□ -1.91
XRN1-213ENST00000489241 PTGES2Q9H7Z7 377 aa3.15□□□□□ -1.91
XRN1-213ENST00000489241 RPRD1BQ9NQG5 326 aaKnown RBP3.15□□□□□ -1.91
XRN1-213ENST00000489241 ZNF275Q9NSD4 429 aaPredicted RBP3.15□□□□□ -1.91
XRN1-213ENST00000489241 PTTG3PQ9NZH4 202 aa3.15□□□□□ -1.91
XRN1-213ENST00000489241 ZNF107Q9UII5 783 aaPredicted RBP3.15□□□□□ -1.91
XRN1-213ENST00000489241 MMP17Q9ULZ9 603 aa3.15□□□□□ -1.91
XRN1-213ENST00000489241 CDHR2Q9BYE9 1310 aa3.15□□□□□ -1.91
XRN1-213ENST00000489241 CFAP65Q6ZU64 1925 aaKnown RBP3.15□□□□□ -1.91
XRN1-213ENST00000489241 TMEM110-MUSTN1A8MSY1 372 aa3.14□□□□□ -1.91
XRN1-213ENST00000489241 L7N2F9 121 aa3.14□□□□□ -1.91
XRN1-213ENST00000489241 CCL21O00585 134 aa3.14□□□□□ -1.91
XRN1-213ENST00000489241 P0C879 139 aa3.14□□□□□ -1.91
XRN1-213ENST00000489241 AZU1P20160 251 aa3.14□□□□□ -1.91
XRN1-213ENST00000489241 NSG1P42857 185 aa3.14□□□□□ -1.91
XRN1-213ENST00000489241 TNNT2P45379 298 aaPredicted RBP3.14□□□□□ -1.91
XRN1-213ENST00000489241 RAB9AP51151 201 aa3.14□□□□□ -1.91
XRN1-213ENST00000489241 P2RY4P51582 365 aa3.14□□□□□ -1.91
XRN1-213ENST00000489241 DIO3P55073 304 aa3.14□□□□□ -1.91
XRN1-213ENST00000489241 CSNK1G2P78368 415 aa3.14□□□□□ -1.91
XRN1-213ENST00000489241 IRX3P78415 501 aaPredicted RBP3.14□□□□□ -1.91
XRN1-213ENST00000489241 MRPS22P82650 360 aaKnown RBP3.14□□□□□ -1.91
XRN1-213ENST00000489241 TGFBR3Q03167 851 aa3.14□□□□□ -1.91
XRN1-213ENST00000489241 KIAA0040Q15053 153 aa3.14□□□□□ -1.91
XRN1-213ENST00000489241 C1orf146Q5VVC0 180 aa3.14□□□□□ -1.91
XRN1-213ENST00000489241 TMEM53Q6P2H8 277 aa3.14□□□□□ -1.91
XRN1-213ENST00000489241 TRIM40Q6P9F5 258 aa3.14□□□□□ -1.91
XRN1-213ENST00000489241 ZNF836Q6ZNA1 936 aa3.14□□□□□ -1.91
XRN1-213ENST00000489241 ZNF571Q7Z3V5 609 aaPredicted RBP3.14□□□□□ -1.91
XRN1-213ENST00000489241 ZNF546Q86UE3 836 aa3.14□□□□□ -1.91
XRN1-213ENST00000489241 PLA2G4DQ86XP0 818 aa3.14□□□□□ -1.91
XRN1-213ENST00000489241 KATNAL2Q8IYT4 538 aa3.14□□□□□ -1.91
XRN1-213ENST00000489241 FBXL16Q8N461 479 aa3.14□□□□□ -1.91
XRN1-213ENST00000489241 COMMD1Q8N668 190 aa3.14□□□□□ -1.91
XRN1-213ENST00000489241 LINC00612Q8N6U2 182 aa3.14□□□□□ -1.91
XRN1-213ENST00000489241 FNDC5Q8NAU1 212 aa3.14□□□□□ -1.91
XRN1-213ENST00000489241 OR10G3Q8NGC4 313 aa3.14□□□□□ -1.91
XRN1-213ENST00000489241 OR1S2Q8NGQ3 325 aa3.14□□□□□ -1.91
XRN1-213ENST00000489241 SMARCD2Q92925 531 aa3.14□□□□□ -1.91
XRN1-213ENST00000489241 STMN2Q93045 179 aa3.14□□□□□ -1.91
XRN1-213ENST00000489241 SORT1Q99523 831 aa3.14□□□□□ -1.91
XRN1-213ENST00000489241 NAT9Q9BTE0 207 aa3.14□□□□□ -1.91
XRN1-213ENST00000489241 GBA3Q9H227 469 aa3.14□□□□□ -1.91
XRN1-213ENST00000489241 NEUROG2Q9H2A3 272 aa3.14□□□□□ -1.91
XRN1-213ENST00000489241 OR51M1Q9H341 326 aa3.14□□□□□ -1.91
XRN1-213ENST00000489241 EHD1Q9H4M9 534 aa3.14□□□□□ -1.91
XRN1-213ENST00000489241 VNN3Q9NY84 501 aa3.14□□□□□ -1.91
XRN1-213ENST00000489241 ABCD2Q9UBJ2 740 aa3.14□□□□□ -1.91
XRN1-213ENST00000489241 PACSIN2Q9UNF0 486 aaPredicted RBP3.14□□□□□ -1.91
XRN1-213ENST00000489241 TRAF3IP3Q9Y228 551 aa3.14□□□□□ -1.91
XRN1-213ENST00000489241 RALGAPA1Q6GYQ0 2036 aa3.14□□□□□ -1.91
XRN1-213ENST00000489241 USP47Q96K76 1375 aa3.13□□□□□ -1.91
XRN1-213ENST00000489241 KIR2DL5BA0A0G2JN68 375 aa3.13□□□□□ -1.91
XRN1-213ENST00000489241 KIR2DL5BA0A0G2JPC4 375 aa3.13□□□□□ -1.91
XRN1-213ENST00000489241 FAM168BA1KXE4 195 aa3.13□□□□□ -1.91
XRN1-213ENST00000489241 RBMY1BA6NDE4 496 aaKnown RBP3.13□□□□□ -1.91
XRN1-213ENST00000489241 RBMY1EA6NEQ0 496 aaKnown RBP3.13□□□□□ -1.91
XRN1-213ENST00000489241 PHOX2AO14813 284 aa3.13□□□□□ -1.91
XRN1-213ENST00000489241 RAB29O14966 203 aa3.13□□□□□ -1.91
XRN1-213ENST00000489241 ZNF780AO75290 641 aaPredicted RBP3.13□□□□□ -1.91
XRN1-213ENST00000489241 ERLIN2O94905 339 aa3.13□□□□□ -1.91
XRN1-213ENST00000489241 TIMP1P01033 207 aa3.13□□□□□ -1.91
XRN1-213ENST00000489241 C2P06681 752 aa3.13□□□□□ -1.91
XRN1-213ENST00000489241 ERCC1P07992 297 aaPredicted RBP3.13□□□□□ -1.91
XRN1-213ENST00000489241 ANXA5P08758 320 aa3.13□□□□□ -1.91
XRN1-213ENST00000489241 RBMY1DP0C7P1 496 aaKnown RBP3.13□□□□□ -1.91
XRN1-213ENST00000489241 RBMY1A1P0DJD3 496 aaKnown RBP3.13□□□□□ -1.91
XRN1-213ENST00000489241 ATP5C1P36542 298 aaKnown RBP3.13□□□□□ -1.91
XRN1-213ENST00000489241 CCT6AP40227 531 aaKnown RBP3.13□□□□□ -1.91
XRN1-213ENST00000489241 OR1G1P47890 313 aa3.13□□□□□ -1.91
XRN1-213ENST00000489241 GPX6P59796 221 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms