RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 BCL6P41182 706 aa16.3■□□□□ 0.2
NPHP4-209ENST00000489180 ANKRD34AQ69YU3 496 aa16.3■□□□□ 0.2
NPHP4-209ENST00000489180 MED25Q71SY5 747 aa16.3■□□□□ 0.2
NPHP4-209ENST00000489180 CNEP1R1Q8N9A8 125 aa16.3■□□□□ 0.2
NPHP4-209ENST00000489180 ISL2Q96A47 359 aa16.3■□□□□ 0.2
NPHP4-209ENST00000489180 PKMYT1Q99640 499 aa16.3■□□□□ 0.2
NPHP4-209ENST00000489180 SOCS7O14512 581 aa16.3■□□□□ 0.2
NPHP4-209ENST00000489180 IGFBP1P08833 259 aaPredicted RBP16.3■□□□□ 0.2
NPHP4-209ENST00000489180 TGFBR1P36897 503 aa16.3■□□□□ 0.2
NPHP4-209ENST00000489180 HTRA3P83110 453 aa16.3■□□□□ 0.2
NPHP4-209ENST00000489180 FAPQ12884 760 aa16.3■□□□□ 0.2
NPHP4-209ENST00000489180 ZNF595Q8IYB9 648 aa16.3■□□□□ 0.2
NPHP4-209ENST00000489180 PLPP7Q8NBV4 271 aa16.3■□□□□ 0.2
NPHP4-209ENST00000489180 ZNF566Q969W8 418 aa16.3■□□□□ 0.2
NPHP4-209ENST00000489180 ZBED3Q96IU2 234 aaPredicted RBP16.3■□□□□ 0.2
NPHP4-209ENST00000489180 SLC19A3Q9BZV2 496 aa16.3■□□□□ 0.2
NPHP4-209ENST00000489180 SELENOIQ9C0D9 397 aa16.3■□□□□ 0.2
NPHP4-209ENST00000489180 PRSS16Q9NQE7 514 aa16.3■□□□□ 0.2
NPHP4-209ENST00000489180 G3V3Y1 287 aa16.3■□□□□ 0.2
NPHP4-209ENST00000489180 CASP6P55212 293 aa16.3■□□□□ 0.2
NPHP4-209ENST00000489180 UBE2KP61086 200 aa16.3■□□□□ 0.2
NPHP4-209ENST00000489180 LINC01599Q8WXQ3 324 aa16.3■□□□□ 0.2
NPHP4-209ENST00000489180 C22orf15Q8WYQ4 148 aa16.3■□□□□ 0.2
NPHP4-209ENST00000489180 PLEKHM1Q9Y4G2 1056 aa16.3■□□□□ 0.2
NPHP4-209ENST00000489180 UBR2Q8IWV8 1755 aa16.3■□□□□ 0.2
NPHP4-209ENST00000489180 HSBP1L1C9JCN9 74 aa16.29■□□□□ 0.2
NPHP4-209ENST00000489180 ZFAND5O76080 213 aa16.29■□□□□ 0.2
NPHP4-209ENST00000489180 NKAIN2Q5VXU1 208 aa16.29■□□□□ 0.2
NPHP4-209ENST00000489180 CST9LP1Q5W188 147 aa16.29■□□□□ 0.2
NPHP4-209ENST00000489180 CADM3Q8N126 398 aa16.29■□□□□ 0.2
NPHP4-209ENST00000489180 PSMF1Q92530 271 aa16.29■□□□□ 0.2
NPHP4-209ENST00000489180 CHST8Q9H2A9 424 aa16.29■□□□□ 0.2
NPHP4-209ENST00000489180 C1orf198Q9H425 327 aa16.29■□□□□ 0.2
NPHP4-209ENST00000489180 MOKQ9UQ07 419 aa16.29■□□□□ 0.2
NPHP4-209ENST00000489180 A0A1B0GTW7 788 aa16.29■□□□□ 0.2
NPHP4-209ENST00000489180 UTS2O95399 124 aa16.29■□□□□ 0.2
NPHP4-209ENST00000489180 NPPBP16860 134 aa16.29■□□□□ 0.2
NPHP4-209ENST00000489180 HOXC13P31276 330 aa16.29■□□□□ 0.2
NPHP4-209ENST00000489180 MRPS34P82930 218 aaKnown RBP16.29■□□□□ 0.2
NPHP4-209ENST00000489180 SEMA3BQ13214 749 aa16.29■□□□□ 0.2
NPHP4-209ENST00000489180 SLX4IPQ5VYV7 408 aa16.29■□□□□ 0.2
NPHP4-209ENST00000489180 SLC16A14Q7RTX9 510 aa16.29■□□□□ 0.2
NPHP4-209ENST00000489180 OR51D1Q8NGF3 324 aa16.29■□□□□ 0.2
NPHP4-209ENST00000489180 OR56B1Q8NGI3 324 aa16.29■□□□□ 0.2
NPHP4-209ENST00000489180 FAM213BQ8TBF2 198 aa16.29■□□□□ 0.2
NPHP4-209ENST00000489180 SGK3Q96BR1 496 aa16.29■□□□□ 0.2
NPHP4-209ENST00000489180 SAMD10Q9BYL1 202 aa16.29■□□□□ 0.2
NPHP4-209ENST00000489180 TK1P04183 234 aa16.29■□□□□ 0.2
NPHP4-209ENST00000489180 JUNBP17275 347 aaPredicted RBP16.29■□□□□ 0.2
NPHP4-209ENST00000489180 ZNF169Q14929 603 aaPredicted RBP16.29■□□□□ 0.2
NPHP4-209ENST00000489180 HENMT1Q5T8I9 393 aaKnown RBP16.29■□□□□ 0.2
NPHP4-209ENST00000489180 RTL6Q6ICC9 239 aa16.29■□□□□ 0.2
NPHP4-209ENST00000489180 TAAR8Q969N4 342 aa16.29■□□□□ 0.2
NPHP4-209ENST00000489180 EVA1AQ9H8M9 152 aa16.29■□□□□ 0.2
NPHP4-209ENST00000489180 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.29■□□□□ 0.23e-6■■■■□ 23.4
NPHP4-209ENST00000489180 AP1G1O43747 822 aa16.29■□□□□ 0.2
NPHP4-209ENST00000489180 GABRA2P47869 451 aa16.29■□□□□ 0.2
NPHP4-209ENST00000489180 LBX1P52954 281 aa16.29■□□□□ 0.2
NPHP4-209ENST00000489180 STEAP1BQ6NZ63 245 aa16.29■□□□□ 0.2
NPHP4-209ENST00000489180 TCTN2Q96GX1 697 aa16.29■□□□□ 0.2
NPHP4-209ENST00000489180 GPR78Q96P69 363 aa16.29■□□□□ 0.2
NPHP4-209ENST00000489180 HCFC2Q9Y5Z7 792 aa16.29■□□□□ 0.2
NPHP4-209ENST00000489180 LAMB4A4D0S4 1761 aa16.29■□□□□ 0.2
NPHP4-209ENST00000489180 CBR1P16152 277 aa16.29■□□□□ 0.2
NPHP4-209ENST00000489180 BLVRBP30043 206 aaPredicted RBP16.29■□□□□ 0.2
NPHP4-209ENST00000489180 ALKBH1Q13686 389 aaKnown RBP16.29■□□□□ 0.2
NPHP4-209ENST00000489180 FAM71E1Q6IPT2 247 aa16.29■□□□□ 0.2
NPHP4-209ENST00000489180 ZNF610Q8N9Z0 462 aa16.29■□□□□ 0.2
NPHP4-209ENST00000489180 SLC6A17Q9H1V8 727 aa16.29■□□□□ 0.2
NPHP4-209ENST00000489180 MDFIC2A0A1B0GVS7 189 aa16.28■□□□□ 0.2
NPHP4-209ENST00000489180 PAPLNO95428 1278 aa16.28■□□□□ 0.2
NPHP4-209ENST00000489180 GPX2P18283 190 aa16.28■□□□□ 0.2
NPHP4-209ENST00000489180 ETV1P50549 477 aa16.28■□□□□ 0.2
NPHP4-209ENST00000489180 BIDP55957 195 aa16.28■□□□□ 0.2
NPHP4-209ENST00000489180 CLVS2Q5SYC1 327 aa16.28■□□□□ 0.2
NPHP4-209ENST00000489180 AADACL3Q5VUY0 350 aa16.28■□□□□ 0.2
NPHP4-209ENST00000489180 GAREM2Q75VX8 874 aa16.28■□□□□ 0.2
NPHP4-209ENST00000489180 C3orf49Q96BT1 292 aa16.28■□□□□ 0.2
NPHP4-209ENST00000489180 NTN4Q9HB63 628 aa16.28■□□□□ 0.2
NPHP4-209ENST00000489180 BLACEA4D250 179 aa16.28■□□□□ 0.2
NPHP4-209ENST00000489180 MSTNO14793 375 aa16.28■□□□□ 0.2
NPHP4-209ENST00000489180 GPR137BO60478 399 aa16.28■□□□□ 0.2
NPHP4-209ENST00000489180 SECTM1Q8WVN6 248 aa16.28■□□□□ 0.2
NPHP4-209ENST00000489180 SGPP1Q9BX95 441 aa16.28■□□□□ 0.2
NPHP4-209ENST00000489180 SUCNR1Q9BXA5 334 aa16.28■□□□□ 0.2
NPHP4-209ENST00000489180 ANKRD19PQ9H560 264 aa16.28■□□□□ 0.2
NPHP4-209ENST00000489180 TMEM38AQ9H6F2 299 aa16.28■□□□□ 0.2
NPHP4-209ENST00000489180 MARCH5Q9NX47 278 aa16.28■□□□□ 0.2
NPHP4-209ENST00000489180 STEAP1Q9UHE8 339 aa16.28■□□□□ 0.2
NPHP4-209ENST00000489180 TRABD2BA6NFA1 517 aa16.28■□□□□ 0.2
NPHP4-209ENST00000489180 GALR3O60755 368 aaPredicted RBP16.28■□□□□ 0.2
NPHP4-209ENST00000489180 IL32P24001 234 aa16.28■□□□□ 0.2
NPHP4-209ENST00000489180 FPR3P25089 353 aa16.28■□□□□ 0.2
NPHP4-209ENST00000489180 CD38P28907 300 aa16.28■□□□□ 0.2
NPHP4-209ENST00000489180 VEGFBP49765 207 aa16.28■□□□□ 0.2
NPHP4-209ENST00000489180 ISL1P61371 349 aa16.28■□□□□ 0.2
NPHP4-209ENST00000489180 XKR7Q5GH72 579 aa16.28■□□□□ 0.2
NPHP4-209ENST00000489180 Q6ZTK2 550 aa16.28■□□□□ 0.2
NPHP4-209ENST00000489180 CCDC71Q8IV32 467 aaPredicted RBP16.28■□□□□ 0.2
NPHP4-209ENST00000489180 SLC16A11Q8NCK7 471 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms