RNA–Protein interactions for RNA: ENST00000489131.1

TOP3A-206, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-206ENST00000489131 CDK1P06493 297 aa11.5□□□□□ -0.57
TOP3A-206ENST00000489131 ADORA3P0DMS8 318 aa11.5□□□□□ -0.57
TOP3A-206ENST00000489131 PAICSP22234 425 aaKnown RBP11.5□□□□□ -0.57
TOP3A-206ENST00000489131 NOS3P29474 1203 aa11.5□□□□□ -0.57
TOP3A-206ENST00000489131 MAGEA5P43359 124 aa11.5□□□□□ -0.57
TOP3A-206ENST00000489131 RPL5P46777 297 aaKnown RBP11.5□□□□□ -0.57
TOP3A-206ENST00000489131 CDH15P55291 814 aa11.5□□□□□ -0.57
TOP3A-206ENST00000489131 TMPRSS3P57727 454 aa11.5□□□□□ -0.57
TOP3A-206ENST00000489131 RAC3P60763 192 aa11.5□□□□□ -0.57
TOP3A-206ENST00000489131 RPL27P61353 136 aaKnown RBP11.5□□□□□ -0.57
TOP3A-206ENST00000489131 ERVK-25P63136 954 aa11.5□□□□□ -0.57
TOP3A-206ENST00000489131 MVKQ03426 396 aa11.5□□□□□ -0.57
TOP3A-206ENST00000489131 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.5□□□□□ -0.57
TOP3A-206ENST00000489131 RAB40BQ12829 278 aa11.5□□□□□ -0.57
TOP3A-206ENST00000489131 CRMP1Q14194 572 aa11.5□□□□□ -0.57
TOP3A-206ENST00000489131 GGTLC2Q14390 218 aa11.5□□□□□ -0.57
TOP3A-206ENST00000489131 IRF3Q14653 427 aa11.5□□□□□ -0.57
TOP3A-206ENST00000489131 WIPI1Q5MNZ9 446 aaPredicted RBP11.5□□□□□ -0.57
TOP3A-206ENST00000489131 RPUSD3Q6P087 351 aaKnown RBP11.5□□□□□ -0.57
TOP3A-206ENST00000489131 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.5□□□□□ -0.57
TOP3A-206ENST00000489131 CPOQ8IVL8 374 aa11.5□□□□□ -0.57
TOP3A-206ENST00000489131 SPARTQ8N0X7 666 aa11.5□□□□□ -0.57
TOP3A-206ENST00000489131 ZADH2Q8N4Q0 377 aa11.5□□□□□ -0.57
TOP3A-206ENST00000489131 EXD3Q8N9H8 876 aa11.5□□□□□ -0.57
TOP3A-206ENST00000489131 FAM98AQ8NCA5 519 aaKnown RBP11.5□□□□□ -0.57
TOP3A-206ENST00000489131 ZNF540Q8NDQ6 660 aa11.5□□□□□ -0.57
TOP3A-206ENST00000489131 KISS1RQ969F8 398 aaPredicted RBP11.5□□□□□ -0.57
TOP3A-206ENST00000489131 COPS4Q9BT78 406 aa11.5□□□□□ -0.57
TOP3A-206ENST00000489131 CDCA4Q9BXL8 241 aa11.5□□□□□ -0.57
TOP3A-206ENST00000489131 FGF20Q9NP95 211 aaPredicted RBP11.5□□□□□ -0.57
TOP3A-206ENST00000489131 WARS2Q9UGM6 360 aaKnown RBP11.5□□□□□ -0.57
TOP3A-206ENST00000489131 RASD1Q9Y272 281 aa11.5□□□□□ -0.57
TOP3A-206ENST00000489131 NOX1Q9Y5S8 564 aa11.5□□□□□ -0.57
TOP3A-206ENST00000489131 SPTBN2O15020 2390 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 TEX13CA0A0J9YWL9 993 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 A0A1W2PNR3 127 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 CCDC182A6NF36 153 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 A6NIZ1 184 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 SLC22A31A6NKX4 558 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 CENPBD1B2RD01 187 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 PRR23D1E9PI22 279 aaPredicted RBP11.49□□□□□ -0.57
TOP3A-206ENST00000489131 J3QRE1 110 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 RNF13O43567 381 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 TRAPPC6AO75865 159 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 F13BP05160 661 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 PRR23D2P0DMB1 279 aaPredicted RBP11.49□□□□□ -0.57
TOP3A-206ENST00000489131 ZNF708P17019 499 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 PCMT1P22061 227 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 SFTPDP35247 375 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 MTNR1AP48039 350 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 CD97P48960 835 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 LHX2P50458 406 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 DAP3P51398 398 aaKnown RBP11.49□□□□□ -0.57
TOP3A-206ENST00000489131 NUDT6P53370 316 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 CDH11P55287 796 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 RAP1BP61224 184 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 RAP1AP62834 184 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 PPIAP62937 165 aaKnown RBP11.49□□□□□ -0.57
TOP3A-206ENST00000489131 PLGLB1Q02325 96 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 KRR1Q13601 381 aaKnown RBP11.49□□□□□ -0.57
TOP3A-206ENST00000489131 TBCEQ15813 527 aaPredicted RBP11.49□□□□□ -0.57
TOP3A-206ENST00000489131 ACKR1Q16570 336 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 MESTQ5EB52 335 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 SLC35D3Q5M8T2 416 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 SLC35F1Q5T1Q4 408 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 XAF1Q6GPH4 301 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 PLBD1Q6P4A8 553 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 B3GNT6Q6ZMB0 384 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 AHSA2Q719I0 299 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 TRILQ7L0X0 811 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 MEPCEQ7L2J0 689 aaKnown RBP11.49□□□□□ -0.57
TOP3A-206ENST00000489131 IGFN1Q86VF2 1251 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 LSM14AQ8ND56 463 aaKnown RBP11.49□□□□□ -0.57
TOP3A-206ENST00000489131 ATP6V1C2Q8NEY4 427 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 OR52E2Q8NGJ4 325 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 C9orf43Q8TAL5 461 aaPredicted RBP11.49□□□□□ -0.57
TOP3A-206ENST00000489131 SGCDQ92629 289 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 Q96M85 177 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 OXGR1Q96P68 337 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 TUBA1CQ9BQE3 449 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 RHNO1Q9BSD3 238 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 SF3B5Q9BWJ5 86 aaKnown RBP11.49□□□□□ -0.57
TOP3A-206ENST00000489131 TSPAN10Q9H1Z9 355 aaPredicted RBP11.49□□□□□ -0.57
TOP3A-206ENST00000489131 TMEM185BQ9H7F4 350 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 VSX1Q9NZR4 365 aaPredicted RBP11.49□□□□□ -0.57
TOP3A-206ENST00000489131 KLHL13Q9P2N7 655 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 GRHPRQ9UBQ7 328 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 ZNF346Q9UL40 294 aaKnown RBP11.49□□□□□ -0.57
TOP3A-206ENST00000489131 DIMT1Q9UNQ2 313 aaKnown RBP11.49□□□□□ -0.57
TOP3A-206ENST00000489131 EXOGQ9Y2C4 368 aaKnown RBP11.49□□□□□ -0.57
TOP3A-206ENST00000489131 APC2O95996 2303 aa11.49□□□□□ -0.57
TOP3A-206ENST00000489131 ASPMQ8IZT6 3477 aa11.48□□□□□ -0.57
TOP3A-206ENST00000489131 A0A1B0GVC2 190 aa11.48□□□□□ -0.57
TOP3A-206ENST00000489131 A0A1W2PRG6 482 aa11.48□□□□□ -0.57
TOP3A-206ENST00000489131 OR6C68A6NDL8 312 aa11.48□□□□□ -0.57
TOP3A-206ENST00000489131 A6NHS1 94 aa11.48□□□□□ -0.57
TOP3A-206ENST00000489131 PTGES3LE9PB15 166 aa11.48□□□□□ -0.57
TOP3A-206ENST00000489131 MKRN2OSH3BPM6 223 aa11.48□□□□□ -0.57
TOP3A-206ENST00000489131 TRAF3IP2O43734 574 aaPredicted RBP11.48□□□□□ -0.57
TOP3A-206ENST00000489131 AKR7A3O95154 331 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms