RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 LY6DQ14210 128 aa14.31□□□□□ -0.12
CLDN11-208ENST00000488989 MARVELD2Q8N4S9 558 aa14.31□□□□□ -0.12
CLDN11-208ENST00000488989 SETD9Q8NE22 299 aa14.31□□□□□ -0.12
CLDN11-208ENST00000488989 ANKK1Q8NFD2 765 aa14.31□□□□□ -0.12
CLDN11-208ENST00000488989 ZPLD1Q8TCW7 415 aa14.31□□□□□ -0.12
CLDN11-208ENST00000488989 FBLIM1Q8WUP2 373 aa14.31□□□□□ -0.12
CLDN11-208ENST00000488989 TRUB1Q8WWH5 349 aaKnown RBP14.31□□□□□ -0.12
CLDN11-208ENST00000488989 ZNF845Q96IR2 970 aaPredicted RBP14.31□□□□□ -0.12
CLDN11-208ENST00000488989 MUS81Q96NY9 551 aa14.31□□□□□ -0.12
CLDN11-208ENST00000488989 UCN2Q96RP3 112 aa14.31□□□□□ -0.12
CLDN11-208ENST00000488989 APOL4Q9BPW4 351 aa14.31□□□□□ -0.12
CLDN11-208ENST00000488989 KATNB1Q9BVA0 655 aa14.31□□□□□ -0.12
CLDN11-208ENST00000488989 IFT27Q9BW83 186 aa14.31□□□□□ -0.12
CLDN11-208ENST00000488989 SF3B5Q9BWJ5 86 aaKnown RBP14.31□□□□□ -0.12
CLDN11-208ENST00000488989 PRRG3Q9BZD7 231 aa14.31□□□□□ -0.12
CLDN11-208ENST00000488989 TXNIPQ9H3M7 391 aa14.31□□□□□ -0.12
CLDN11-208ENST00000488989 SHANK1Q9Y566 2161 aa14.31□□□□□ -0.12
CLDN11-208ENST00000488989 SPENQ96T58 3664 aaKnown RBP14.3□□□□□ -0.12
CLDN11-208ENST00000488989 DOCK7Q96N67 2140 aa14.3□□□□□ -0.12
CLDN11-208ENST00000488989 CACNA1BQ00975 2339 aa14.3□□□□□ -0.12
CLDN11-208ENST00000488989 ATRXP46100 2492 aa14.3□□□□□ -0.12
CLDN11-208ENST00000488989 C11orf98E9PRG8 122 aa14.3□□□□□ -0.12
CLDN11-208ENST00000488989 SURF4O15260 269 aa14.3□□□□□ -0.12
CLDN11-208ENST00000488989 RNF13O43567 381 aa14.3□□□□□ -0.12
CLDN11-208ENST00000488989 CYTIPO60759 359 aa14.3□□□□□ -0.12
CLDN11-208ENST00000488989 RAMP1O60894 148 aa14.3□□□□□ -0.12
CLDN11-208ENST00000488989 F13BP05160 661 aa14.3□□□□□ -0.12
CLDN11-208ENST00000488989 GABRB1P18505 474 aa14.3□□□□□ -0.12
CLDN11-208ENST00000488989 RPL4P36578 427 aaKnown RBP14.3□□□□□ -0.12
CLDN11-208ENST00000488989 SLC16A1P53985 500 aa14.3□□□□□ -0.12
CLDN11-208ENST00000488989 CDC42P60953 191 aa14.3□□□□□ -0.12
CLDN11-208ENST00000488989 ISL1P61371 349 aa14.3□□□□□ -0.12
CLDN11-208ENST00000488989 HSF1Q00613 529 aa14.3□□□□□ -0.12
CLDN11-208ENST00000488989 MYBPC1Q00872 1141 aa14.3□□□□□ -0.12
CLDN11-208ENST00000488989 SRYQ05066 204 aa14.3□□□□□ -0.12
CLDN11-208ENST00000488989 SLC17A1Q14916 467 aa14.3□□□□□ -0.12
CLDN11-208ENST00000488989 PDK3Q15120 406 aa14.3□□□□□ -0.12
CLDN11-208ENST00000488989 EMC4Q5J8M3 183 aa14.3□□□□□ -0.12
CLDN11-208ENST00000488989 ZNF362Q5T0B9 420 aaPredicted RBP14.3□□□□□ -0.12
CLDN11-208ENST00000488989 GPR139Q6DWJ6 353 aa14.3□□□□□ -0.12
CLDN11-208ENST00000488989 CASP12Q6UXS9 341 aa14.3□□□□□ -0.12
CLDN11-208ENST00000488989 IGFN1Q86VF2 1251 aa14.3□□□□□ -0.12
CLDN11-208ENST00000488989 CCDC103Q8IW40 242 aa14.3□□□□□ -0.12
CLDN11-208ENST00000488989 C8orf59Q8N0T1 100 aaPredicted RBP14.3□□□□□ -0.12
CLDN11-208ENST00000488989 DEPDC4Q8N2C3 294 aa14.3□□□□□ -0.12
CLDN11-208ENST00000488989 TUBA1CQ9BQE3 449 aa14.3□□□□□ -0.12
CLDN11-208ENST00000488989 TEX12Q9BXU0 123 aa14.3□□□□□ -0.12
CLDN11-208ENST00000488989 POLDIP3Q9BY77 421 aaKnown RBP14.3□□□□□ -0.12
CLDN11-208ENST00000488989 CMC2Q9NRP2 79 aa14.3□□□□□ -0.12
CLDN11-208ENST00000488989 TNFRSF10DQ9UBN6 386 aa14.3□□□□□ -0.12
CLDN11-208ENST00000488989 CAMK2AQ9UQM7 478 aa14.3□□□□□ -0.12
CLDN11-208ENST00000488989 ZNF175Q9Y473 711 aa14.3□□□□□ -0.12
CLDN11-208ENST00000488989 NOX1Q9Y5S8 564 aa14.3□□□□□ -0.12
CLDN11-208ENST00000488989 IER3IP1Q9Y5U9 82 aa14.3□□□□□ -0.12
CLDN11-208ENST00000488989 PRRC2CQ9Y520 2896 aaKnown RBP14.3□□□□□ -0.12
CLDN11-208ENST00000488989 SPTA1P02549 2419 aa14.3□□□□□ -0.12
CLDN11-208ENST00000488989 ZNF716A6NP11 495 aa14.29□□□□□ -0.12
CLDN11-208ENST00000488989 NPIPA2E9PIF3 369 aa14.29□□□□□ -0.12
CLDN11-208ENST00000488989 NPIPA3F8WFD2 350 aa14.29□□□□□ -0.12
CLDN11-208ENST00000488989 TRAF3IP2O43734 574 aaPredicted RBP14.29□□□□□ -0.12
CLDN11-208ENST00000488989 HLA-DOBP13765 273 aa14.29□□□□□ -0.12
CLDN11-208ENST00000488989 AHCYP23526 432 aa14.29□□□□□ -0.12
CLDN11-208ENST00000488989 SDHAP31040 664 aa14.29□□□□□ -0.12
CLDN11-208ENST00000488989 PCYT1AP49585 367 aa14.29□□□□□ -0.12
CLDN11-208ENST00000488989 SNRPGP62308 76 aaKnown RBP14.29□□□□□ -0.12
CLDN11-208ENST00000488989 ERVK-25P63136 954 aa14.29□□□□□ -0.12
CLDN11-208ENST00000488989 C3AR1Q16581 482 aa14.29□□□□□ -0.12
CLDN11-208ENST00000488989 TMEM225Q6GV28 225 aa14.29□□□□□ -0.12
CLDN11-208ENST00000488989 FCRLAQ7L513 359 aa14.29□□□□□ -0.12
CLDN11-208ENST00000488989 THAP5Q7Z6K1 395 aa14.29□□□□□ -0.12
CLDN11-208ENST00000488989 ENTHD1Q8IYW4 607 aa14.29□□□□□ -0.12
CLDN11-208ENST00000488989 KDM8Q8N371 416 aa14.29□□□□□ -0.12
CLDN11-208ENST00000488989 OR8J1Q8NGP2 316 aa14.29□□□□□ -0.12
CLDN11-208ENST00000488989 RHOXF1Q8NHV9 184 aa14.29□□□□□ -0.12
CLDN11-208ENST00000488989 ZNF519Q8TB69 540 aa14.29□□□□□ -0.12
CLDN11-208ENST00000488989 FAM81AQ8TBF8 368 aa14.29□□□□□ -0.12
CLDN11-208ENST00000488989 RNF128Q8TEB7 428 aa14.29□□□□□ -0.12
CLDN11-208ENST00000488989 ERMAPQ96PL5 475 aaPredicted RBP14.29□□□□□ -0.12
CLDN11-208ENST00000488989 SLC38A2Q96QD8 506 aa14.29□□□□□ -0.12
CLDN11-208ENST00000488989 TSPAN32Q96QS1 320 aa14.29□□□□□ -0.12
CLDN11-208ENST00000488989 DDOQ99489 341 aa14.29□□□□□ -0.12
CLDN11-208ENST00000488989 ASF1BQ9NVP2 202 aa14.29□□□□□ -0.12
CLDN11-208ENST00000488989 ZNF226Q9NYT6 803 aa14.29□□□□□ -0.12
CLDN11-208ENST00000488989 TVP23BQ9NYZ1 205 aa14.29□□□□□ -0.12
CLDN11-208ENST00000488989 ZNF346Q9UL40 294 aaKnown RBP14.29□□□□□ -0.12
CLDN11-208ENST00000488989 MCTS1Q9ULC4 181 aaKnown RBP14.29□□□□□ -0.12
CLDN11-208ENST00000488989 LRCH1Q9Y2L9 728 aa14.29□□□□□ -0.12
CLDN11-208ENST00000488989 ADAM18Q9Y3Q7 739 aa14.29□□□□□ -0.12
CLDN11-208ENST00000488989 IGKV3D-15A0A087WSY6 115 aa14.28□□□□□ -0.12
CLDN11-208ENST00000488989 IGHV3-15A0A0B4J1V0 119 aa14.28□□□□□ -0.12
CLDN11-208ENST00000488989 A0A1W2PRG6 482 aa14.28□□□□□ -0.12
CLDN11-208ENST00000488989 AHRRA9YTQ3 701 aa14.28□□□□□ -0.12
CLDN11-208ENST00000488989 MPZL2O60487 215 aa14.28□□□□□ -0.12
CLDN11-208ENST00000488989 SYNGR4O95473 234 aa14.28□□□□□ -0.12
CLDN11-208ENST00000488989 PTGS2P35354 604 aa14.28□□□□□ -0.12
CLDN11-208ENST00000488989 RPL27P61353 136 aaKnown RBP14.28□□□□□ -0.12
CLDN11-208ENST00000488989 TEKQ02763 1124 aa14.28□□□□□ -0.12
CLDN11-208ENST00000488989 MED21Q13503 144 aa14.28□□□□□ -0.12
CLDN11-208ENST00000488989 SNAPC1Q16533 368 aa14.28□□□□□ -0.12
CLDN11-208ENST00000488989 ACKR1Q16570 336 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms