RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 OPN1SWP03999 348 aa10.4□□□□□ -0.74
CCHCR1-215ENST00000488920 HLA-DOBP13765 273 aa10.4□□□□□ -0.74
CCHCR1-215ENST00000488920 NQO1P15559 274 aaKnown RBP10.4□□□□□ -0.74
CCHCR1-215ENST00000488920 PCBP3P57721 371 aaKnown RBP10.4□□□□□ -0.74
CCHCR1-215ENST00000488920 CHRNB3Q05901 458 aa10.4□□□□□ -0.74
CCHCR1-215ENST00000488920 PMS2P3Q13401 168 aa10.4□□□□□ -0.74
CCHCR1-215ENST00000488920 NFYCQ13952 458 aa10.4□□□□□ -0.74
CCHCR1-215ENST00000488920 DUSP7Q16829 419 aa10.4□□□□□ -0.74
CCHCR1-215ENST00000488920 MST1LQ2TV78 715 aa10.4□□□□□ -0.74
CCHCR1-215ENST00000488920 CARD17Q5XLA6 110 aa10.4□□□□□ -0.74
CCHCR1-215ENST00000488920 RANBP3LQ86VV4 465 aaPredicted RBP10.4□□□□□ -0.74
CCHCR1-215ENST00000488920 GPR137CQ8N3F9 429 aa10.4□□□□□ -0.74
CCHCR1-215ENST00000488920 BHLHE22Q8NFJ8 381 aaPredicted RBP10.4□□□□□ -0.74
CCHCR1-215ENST00000488920 GPR32P1Q8NGA4 272 aa10.4□□□□□ -0.74
CCHCR1-215ENST00000488920 OR10H5Q8NGA6 315 aa10.4□□□□□ -0.74
CCHCR1-215ENST00000488920 MAGEE2Q8TD90 523 aaPredicted RBP10.4□□□□□ -0.74
CCHCR1-215ENST00000488920 STON2Q8WXE9 905 aa10.4□□□□□ -0.74
CCHCR1-215ENST00000488920 FBXO17Q96EF6 278 aa10.4□□□□□ -0.74
CCHCR1-215ENST00000488920 MOGAT1Q96PD6 335 aa10.4□□□□□ -0.74
CCHCR1-215ENST00000488920 OR2M2Q96R28 347 aa10.4□□□□□ -0.74
CCHCR1-215ENST00000488920 EPYCQ99645 322 aa10.4□□□□□ -0.74
CCHCR1-215ENST00000488920 MCHR1Q99705 422 aa10.4□□□□□ -0.74
CCHCR1-215ENST00000488920 KCNS3Q9BQ31 491 aa10.4□□□□□ -0.74
CCHCR1-215ENST00000488920 CRLF2Q9HC73 371 aa10.4□□□□□ -0.74
CCHCR1-215ENST00000488920 GPR35Q9HC97 309 aa10.4□□□□□ -0.74
CCHCR1-215ENST00000488920 TLN2Q9Y4G6 2542 aa10.4□□□□□ -0.75
CCHCR1-215ENST00000488920 HIVEP2P31629 2446 aa10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 ARPC4-TTLL3A0A0A6YYG9 625 aa10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 KIAA1324LA8MWY0 1029 aaPredicted RBP10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 RPL36A-HNRNPH2H7BZ11 118 aa10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 H7C417 338 aa10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 M0R3G1 203 aa10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 TRAF3IP2O43734 574 aaPredicted RBP10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 GPRIN2O60269 458 aa10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 SASH3O75995 380 aa10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 LY6HO94772 140 aa10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 CRYAAP02489 173 aa10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 TP53P04637 393 aaPredicted RBP10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 CECR9P0C854 216 aa10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 BMP4P12644 408 aa10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 SH3BGRP55822 239 aaPredicted RBP10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 RBBP4Q09028 425 aa10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 SF3A3Q12874 501 aaKnown RBP eCLIP10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 MFSD13AQ14CX5 517 aa10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 CEACAM16Q2WEN9 425 aa10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 PHYHD1Q5SRE7 291 aa10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 METTL21CQ5VZV1 264 aa10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 CLEC2AQ6UVW9 174 aa10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 RBM45Q8IUH3 476 aaKnown RBP10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 UEVLDQ8IX04 471 aa10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 TMEM123Q8N131 208 aa10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 ZNF525Q8N782 197 aa10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 PIK3C3Q8NEB9 887 aa10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 ANKK1Q8NFD2 765 aa10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 OR6T1Q8NGN1 323 aa10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 OR6S1Q8NH40 331 aa10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 TSPEARQ8WU66 669 aa10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 SLC41A3Q96GZ6 507 aa10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 TXNDC15Q96J42 360 aa10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 ARHGDIGQ99819 225 aa10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 EMC6Q9BV81 110 aa10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 KATNB1Q9BVA0 655 aa10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 ASPNQ9BXN1 380 aa10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 NELFAQ9H3P2 528 aa10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 KAT8Q9H7Z6 458 aaKnown RBP10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 SEC61A2Q9H9S3 476 aa10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 YAE1D1Q9NRH1 226 aa10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 CORINQ9Y5Q5 1042 aa10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 PMF1-BGLAPU3KQ54 211 aa10.39□□□□□ -0.75
CCHCR1-215ENST00000488920 ABCA2Q9BZC7 2435 aa10.38□□□□□ -0.75
CCHCR1-215ENST00000488920 CPSF4LA6NMK7 179 aaKnown RBP10.38□□□□□ -0.75
CCHCR1-215ENST00000488920 FBP2O00757 339 aa10.38□□□□□ -0.75
CCHCR1-215ENST00000488920 PLPP3O14495 311 aa10.38□□□□□ -0.75
CCHCR1-215ENST00000488920 SEC14L2O76054 403 aa10.38□□□□□ -0.75
CCHCR1-215ENST00000488920 C8BP07358 591 aa10.38□□□□□ -0.75
CCHCR1-215ENST00000488920 CELA3BP08861 270 aa10.38□□□□□ -0.75
CCHCR1-215ENST00000488920 HOXB1P14653 301 aaPredicted RBP10.38□□□□□ -0.75
CCHCR1-215ENST00000488920 CBR1P16152 277 aa10.38□□□□□ -0.75
CCHCR1-215ENST00000488920 AHCYP23526 432 aa10.38□□□□□ -0.75
CCHCR1-215ENST00000488920 CALCRP30988 508 aa10.38□□□□□ -0.75
CCHCR1-215ENST00000488920 SERPINF1P36955 418 aa10.38□□□□□ -0.75
CCHCR1-215ENST00000488920 EFNA4P52798 201 aa10.38□□□□□ -0.75
CCHCR1-215ENST00000488920 DSCR9P59020 149 aa10.38□□□□□ -0.75
CCHCR1-215ENST00000488920 NAAAQ02083 359 aa10.38□□□□□ -0.75
CCHCR1-215ENST00000488920 NPTX1Q15818 432 aa10.38□□□□□ -0.75
CCHCR1-215ENST00000488920 SWI5Q1ZZU3 235 aa10.38□□□□□ -0.75
CCHCR1-215ENST00000488920 ENTPD8Q5MY95 495 aa10.38□□□□□ -0.75
CCHCR1-215ENST00000488920 SWT1Q5T5J6 900 aaKnown RBP10.38□□□□□ -0.75
CCHCR1-215ENST00000488920 VHLLQ6RSH7 139 aa10.38□□□□□ -0.75
CCHCR1-215ENST00000488920 NHLRC1Q6VVB1 395 aa10.38□□□□□ -0.75
CCHCR1-215ENST00000488920 WDFY1Q8IWB7 410 aa10.38□□□□□ -0.75
CCHCR1-215ENST00000488920 C20orf196Q8IYI0 205 aa10.38□□□□□ -0.75
CCHCR1-215ENST00000488920 SCAIQ8N9R8 606 aa10.38□□□□□ -0.75
CCHCR1-215ENST00000488920 ADPRHL1Q8NDY3 354 aa10.38□□□□□ -0.75
CCHCR1-215ENST00000488920 OR4D11Q8NGI4 311 aa10.38□□□□□ -0.75
CCHCR1-215ENST00000488920 OR10A6Q8NH74 314 aa10.38□□□□□ -0.75
CCHCR1-215ENST00000488920 VANGL1Q8TAA9 524 aaPredicted RBP10.38□□□□□ -0.75
CCHCR1-215ENST00000488920 NANOS1Q8WY41 292 aaKnown RBP10.38□□□□□ -0.75
CCHCR1-215ENST00000488920 TAMM41Q96BW9 452 aa10.38□□□□□ -0.75
CCHCR1-215ENST00000488920 ZNF317Q96PQ6 595 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms