RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 BMP2P12643 396 aa15.96■□□□□ 0.15
HDAC6-231ENST00000488905 CBR1P16152 277 aa15.96■□□□□ 0.15
HDAC6-231ENST00000488905 NPRL3Q12980 569 aa15.96■□□□□ 0.15
HDAC6-231ENST00000488905 FADDQ13158 208 aa15.96■□□□□ 0.15
HDAC6-231ENST00000488905 FAM69AQ5T7M9 428 aa15.96■□□□□ 0.15
HDAC6-231ENST00000488905 C5orf46Q6UWT4 87 aa15.96■□□□□ 0.15
HDAC6-231ENST00000488905 MIER2Q8N344 545 aa15.96■□□□□ 0.15
HDAC6-231ENST00000488905 GPR137CQ8N3F9 429 aa15.96■□□□□ 0.15
HDAC6-231ENST00000488905 ZNF417Q8TAU3 575 aa15.96■□□□□ 0.15
HDAC6-231ENST00000488905 GTF2H4Q92759 462 aa15.96■□□□□ 0.15
HDAC6-231ENST00000488905 OXGR1Q96P68 337 aa15.96■□□□□ 0.15
HDAC6-231ENST00000488905 OR52B2Q96RD2 323 aa15.96■□□□□ 0.15
HDAC6-231ENST00000488905 ZNF587Q96SQ5 575 aaPredicted RBP15.96■□□□□ 0.15
HDAC6-231ENST00000488905 PAIP1Q9H074 479 aaKnown RBP15.96■□□□□ 0.15
HDAC6-231ENST00000488905 RAD21L1Q9H4I0 556 aa15.96■□□□□ 0.15
HDAC6-231ENST00000488905 CRLF2Q9HC73 371 aa15.96■□□□□ 0.15
HDAC6-231ENST00000488905 RAB21Q9UL25 225 aa15.96■□□□□ 0.15
HDAC6-231ENST00000488905 PCDHB14Q9Y5E9 798 aa15.96■□□□□ 0.15
HDAC6-231ENST00000488905 IGHV2OR16-5A0A0B4J2B6 119 aa15.95■□□□□ 0.14
HDAC6-231ENST00000488905 C5orf58C9J3I9 102 aa15.95■□□□□ 0.14
HDAC6-231ENST00000488905 AKAP8O43823 692 aaKnown RBP15.95■□□□□ 0.14
HDAC6-231ENST00000488905 OR2T1O43869 369 aa15.95■□□□□ 0.14
HDAC6-231ENST00000488905 STAMBPO95630 424 aa15.95■□□□□ 0.14
HDAC6-231ENST00000488905 TGFAP01135 160 aa15.95■□□□□ 0.14
HDAC6-231ENST00000488905 ERCC1P07992 297 aaPredicted RBP15.95■□□□□ 0.14
HDAC6-231ENST00000488905 HOXB9P17482 250 aaPredicted RBP15.95■□□□□ 0.14
HDAC6-231ENST00000488905 NPR2P20594 1047 aa15.95■□□□□ 0.14
HDAC6-231ENST00000488905 GIFP27352 417 aa15.95■□□□□ 0.14
HDAC6-231ENST00000488905 HTR2AP28223 471 aa15.95■□□□□ 0.14
HDAC6-231ENST00000488905 THBS4P35443 961 aa15.95■□□□□ 0.14
HDAC6-231ENST00000488905 SRSF2Q01130 221 aaKnown RBP15.95■□□□□ 0.14
HDAC6-231ENST00000488905 C1DQ13901 141 aaKnown RBP15.95■□□□□ 0.14
HDAC6-231ENST00000488905 CEACAM16Q2WEN9 425 aa15.95■□□□□ 0.14
HDAC6-231ENST00000488905 TMEM123Q8N131 208 aa15.95■□□□□ 0.14
HDAC6-231ENST00000488905 SVOPLQ8N434 492 aa15.95■□□□□ 0.14
HDAC6-231ENST00000488905 PIK3C3Q8NEB9 887 aa15.95■□□□□ 0.14
HDAC6-231ENST00000488905 SLC38A4Q969I6 547 aa15.95■□□□□ 0.14
HDAC6-231ENST00000488905 TAAR8Q969N4 342 aa15.95■□□□□ 0.14
HDAC6-231ENST00000488905 ZNF837Q96EG3 531 aaPredicted RBP15.95■□□□□ 0.14
HDAC6-231ENST00000488905 ANKRD27Q96NW4 1050 aa15.95■□□□□ 0.14
HDAC6-231ENST00000488905 OR2M2Q96R28 347 aa15.95■□□□□ 0.14
HDAC6-231ENST00000488905 SOX7Q9BT81 388 aa15.95■□□□□ 0.14
HDAC6-231ENST00000488905 IGKV1D-42A0A075B6H8 117 aa15.94■□□□□ 0.14
HDAC6-231ENST00000488905 A0A1B0GWA3 101 aa15.94■□□□□ 0.14
HDAC6-231ENST00000488905 CLIC1O00299 241 aa15.94■□□□□ 0.14
HDAC6-231ENST00000488905 TRAF3IP2O43734 574 aaPredicted RBP15.94■□□□□ 0.14
HDAC6-231ENST00000488905 SEC14L2O76054 403 aa15.94■□□□□ 0.14
HDAC6-231ENST00000488905 DAOP14920 347 aa15.94■□□□□ 0.14
HDAC6-231ENST00000488905 ETS2P15036 469 aa15.94■□□□□ 0.14
HDAC6-231ENST00000488905 GRPRP30550 384 aa15.94■□□□□ 0.14
HDAC6-231ENST00000488905 PRKAR1BP31321 381 aa15.94■□□□□ 0.14
HDAC6-231ENST00000488905 ARR3P36575 388 aa15.94■□□□□ 0.14
HDAC6-231ENST00000488905 IL1RL1Q01638 556 aa15.94■□□□□ 0.14
HDAC6-231ENST00000488905 SLC2A7Q6PXP3 512 aa15.94■□□□□ 0.14
HDAC6-231ENST00000488905 SPATA21Q7Z572 469 aa15.94■□□□□ 0.14
HDAC6-231ENST00000488905 MDP1Q86V88 176 aa15.94■□□□□ 0.14
HDAC6-231ENST00000488905 LSMEM1Q8N8F7 131 aa15.94■□□□□ 0.14
HDAC6-231ENST00000488905 ADPRHL1Q8NDY3 354 aa15.94■□□□□ 0.14
HDAC6-231ENST00000488905 NEU4Q8WWR8 484 aaPredicted RBP15.94■□□□□ 0.14
HDAC6-231ENST00000488905 NOX3Q9HBY0 568 aa15.94■□□□□ 0.14
HDAC6-231ENST00000488905 DYNLRB1Q9NP97 96 aa15.94■□□□□ 0.14
HDAC6-231ENST00000488905 TRAV36DV7A0A075B6V5 113 aa15.93■□□□□ 0.14
HDAC6-231ENST00000488905 LRP5LA4QPB2 252 aa15.93■□□□□ 0.14
HDAC6-231ENST00000488905 VSTM5A8MXK1 200 aa15.93■□□□□ 0.14
HDAC6-231ENST00000488905 ZNF99A8MXY4 864 aaPredicted RBP15.93■□□□□ 0.14
HDAC6-231ENST00000488905 CAPZA2P47755 286 aa15.93■□□□□ 0.14
HDAC6-231ENST00000488905 SNTB2Q13425 540 aaKnown RBP15.93■□□□□ 0.14
HDAC6-231ENST00000488905 CR1LQ2VPA4 569 aa15.93■□□□□ 0.14
HDAC6-231ENST00000488905 ALG10BQ5I7T1 473 aa15.93■□□□□ 0.14
HDAC6-231ENST00000488905 H1FNTQ75WM6 255 aaPredicted RBP15.93■□□□□ 0.14
HDAC6-231ENST00000488905 COMTD1Q86VU5 262 aa15.93■□□□□ 0.14
HDAC6-231ENST00000488905 CCDC36Q8IYA8 594 aa15.93■□□□□ 0.14
HDAC6-231ENST00000488905 CDK20Q8IZL9 346 aa15.93■□□□□ 0.14
HDAC6-231ENST00000488905 ZCCHC24Q8N2G6 241 aaKnown RBP15.93■□□□□ 0.14
HDAC6-231ENST00000488905 GOLGA6L1Q8N7Z2 621 aa15.93■□□□□ 0.14
HDAC6-231ENST00000488905 DNAJA4Q8WW22 397 aaPredicted RBP15.93■□□□□ 0.14
HDAC6-231ENST00000488905 DOK1Q99704 481 aa15.93■□□□□ 0.14
HDAC6-231ENST00000488905 RSPO3Q9BXY4 272 aaPredicted RBP15.93■□□□□ 0.14
HDAC6-231ENST00000488905 KLHL14Q9P2G3 628 aa15.93■□□□□ 0.14
HDAC6-231ENST00000488905 USP22Q9UPT9 525 aa15.93■□□□□ 0.14
HDAC6-231ENST00000488905 LOC102725191A0A1B0GVB3 256 aa15.92■□□□□ 0.14
HDAC6-231ENST00000488905 TACSTD2P09758 323 aa15.92■□□□□ 0.14
HDAC6-231ENST00000488905 ARAFP10398 606 aa15.92■□□□□ 0.14
HDAC6-231ENST00000488905 CBLP22681 906 aa15.92■□□□□ 0.14
HDAC6-231ENST00000488905 CHN2P52757 468 aa15.92■□□□□ 0.14
HDAC6-231ENST00000488905 SLC18A1P54219 525 aa15.92■□□□□ 0.14
HDAC6-231ENST00000488905 DAG1Q14118 895 aa15.92■□□□□ 0.14
HDAC6-231ENST00000488905 SQLEQ14534 574 aa15.92■□□□□ 0.14
HDAC6-231ENST00000488905 KRT80Q6KB66 452 aa15.92■□□□□ 0.14
HDAC6-231ENST00000488905 NET1Q7Z628 596 aaPredicted RBP15.92■□□□□ 0.14
HDAC6-231ENST00000488905 UEVLDQ8IX04 471 aa15.92■□□□□ 0.14
HDAC6-231ENST00000488905 IL17RDQ8NFM7 739 aa15.92■□□□□ 0.14
HDAC6-231ENST00000488905 NFKBIDQ8NI38 313 aa15.92■□□□□ 0.14
HDAC6-231ENST00000488905 CKAP2Q8WWK9 683 aa15.92■□□□□ 0.14
HDAC6-231ENST00000488905 NKIRAS1Q9NYS0 192 aa15.92■□□□□ 0.14
HDAC6-231ENST00000488905 SLC25A37Q9NYZ2 338 aa15.92■□□□□ 0.14
HDAC6-231ENST00000488905 TESQ9UGI8 421 aaKnown RBP15.92■□□□□ 0.14
HDAC6-231ENST00000488905 TMEM129A0AVI4 362 aa15.91■□□□□ 0.14
HDAC6-231ENST00000488905 M0R3G1 203 aa15.91■□□□□ 0.14
HDAC6-231ENST00000488905 LILRA1O75019 489 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms