RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 ATP23Q9Y6H3 246 aa20.17■□□□□ 0.82
CUL4A-209ENST00000488558 ABCA2Q9BZC7 2435 aa20.17■□□□□ 0.82
CUL4A-209ENST00000488558 CR1P17927 2039 aa20.17■□□□□ 0.82
CUL4A-209ENST00000488558 ATP6V1G2-DDX39BF2Z307 99 aa20.16■□□□□ 0.82
CUL4A-209ENST00000488558 BMP4P12644 408 aa20.16■□□□□ 0.82
CUL4A-209ENST00000488558 UBE2NP61088 152 aaKnown RBP20.16■□□□□ 0.82
CUL4A-209ENST00000488558 ROR2Q01974 943 aaKnown RBP20.16■□□□□ 0.82
CUL4A-209ENST00000488558 KRTAP1-1Q07627 177 aa20.16■□□□□ 0.82
CUL4A-209ENST00000488558 C1DQ13901 141 aaKnown RBP20.16■□□□□ 0.82
CUL4A-209ENST00000488558 PATL1Q86TB9 770 aaKnown RBP20.16■□□□□ 0.82
CUL4A-209ENST00000488558 FAM169BQ8N8A8 192 aa20.16■□□□□ 0.82
CUL4A-209ENST00000488558 PIK3C3Q8NEB9 887 aa20.16■□□□□ 0.82
CUL4A-209ENST00000488558 SLC38A2Q96QD8 506 aa20.16■□□□□ 0.82
CUL4A-209ENST00000488558 KATNB1Q9BVA0 655 aa20.16■□□□□ 0.82
CUL4A-209ENST00000488558 NELFAQ9H3P2 528 aa20.16■□□□□ 0.82
CUL4A-209ENST00000488558 CSPG4Q6UVK1 2322 aa20.16■□□□□ 0.82
CUL4A-209ENST00000488558 IGHV1-18A0A0C4DH31 117 aa20.15■□□□□ 0.82
CUL4A-209ENST00000488558 BGLAPP02818 100 aa20.15■□□□□ 0.82
CUL4A-209ENST00000488558 PTNP21246 168 aa20.15■□□□□ 0.82
CUL4A-209ENST00000488558 APOBEC3AP31941 199 aaPredicted RBP20.15■□□□□ 0.82
CUL4A-209ENST00000488558 PCGF2P35227 344 aa20.15■□□□□ 0.82
CUL4A-209ENST00000488558 CDH12P55289 794 aa20.15■□□□□ 0.82
CUL4A-209ENST00000488558 TMEM123Q8N131 208 aa20.15■□□□□ 0.82
CUL4A-209ENST00000488558 SMYD1Q8NB12 490 aa20.15■□□□□ 0.82
CUL4A-209ENST00000488558 OR2M2Q96R28 347 aa20.15■□□□□ 0.82
CUL4A-209ENST00000488558 WFDC6Q9BQY6 131 aa20.15■□□□□ 0.82
CUL4A-209ENST00000488558 ASPNQ9BXN1 380 aa20.15■□□□□ 0.82
CUL4A-209ENST00000488558 M0QX08 132 aa20.14■□□□□ 0.81
CUL4A-209ENST00000488558 CHP2O43745 196 aa20.14■□□□□ 0.81
CUL4A-209ENST00000488558 IGLV1-44P01699 117 aa20.14■□□□□ 0.81
CUL4A-209ENST00000488558 NUDT6P53370 316 aa20.14■□□□□ 0.81
CUL4A-209ENST00000488558 DSCR9P59020 149 aa20.14■□□□□ 0.81
CUL4A-209ENST00000488558 PPP2R2BQ00005 443 aa20.14■□□□□ 0.81
CUL4A-209ENST00000488558 CHRNB3Q05901 458 aa20.14■□□□□ 0.81
CUL4A-209ENST00000488558 DUSP7Q16829 419 aa20.14■□□□□ 0.81
CUL4A-209ENST00000488558 TRMT5Q32P41 509 aaKnown RBP20.14■□□□□ 0.81
CUL4A-209ENST00000488558 COQ5Q5HYK3 327 aa20.14■□□□□ 0.81
CUL4A-209ENST00000488558 INTS11Q5TA45 600 aaKnown RBP20.14■□□□□ 0.81
CUL4A-209ENST00000488558 LINC00114Q6XXX2 140 aa20.14■□□□□ 0.81
CUL4A-209ENST00000488558 UEVLDQ8IX04 471 aa20.14■□□□□ 0.81
CUL4A-209ENST00000488558 GPR137CQ8N3F9 429 aa20.14■□□□□ 0.81
CUL4A-209ENST00000488558 GPR32P1Q8NGA4 272 aa20.14■□□□□ 0.81
CUL4A-209ENST00000488558 RNF217Q8TC41 542 aa20.14■□□□□ 0.81
CUL4A-209ENST00000488558 MCHR1Q99705 422 aa20.14■□□□□ 0.81
CUL4A-209ENST00000488558 GPR35Q9HC97 309 aa20.14■□□□□ 0.81
CUL4A-209ENST00000488558 MRPL39Q9NYK5 338 aaKnown RBP20.14■□□□□ 0.81
CUL4A-209ENST00000488558 MOKQ9UQ07 419 aa20.14■□□□□ 0.81
CUL4A-209ENST00000488558 MS4A18H0YCH9 400 aa20.13■□□□□ 0.81
CUL4A-209ENST00000488558 M0R3H8 397 aa20.13■□□□□ 0.81
CUL4A-209ENST00000488558 SSX4O60224 188 aa20.13■□□□□ 0.81
CUL4A-209ENST00000488558 MT-ATP6P00846 226 aa20.13■□□□□ 0.81
CUL4A-209ENST00000488558 OPN1SWP03999 348 aa20.13■□□□□ 0.81
CUL4A-209ENST00000488558 NQO1P15559 274 aaKnown RBP20.13■□□□□ 0.81
CUL4A-209ENST00000488558 MS4A18Q3C1V0 323 aa20.13■□□□□ 0.81
CUL4A-209ENST00000488558 RASSF5Q8WWW0 418 aa20.13■□□□□ 0.81
CUL4A-209ENST00000488558 KCNS3Q9BQ31 491 aa20.13■□□□□ 0.81
CUL4A-209ENST00000488558 RHNO1Q9BSD3 238 aa20.13■□□□□ 0.81
CUL4A-209ENST00000488558 TMEM120AQ9BXJ8 343 aa20.13■□□□□ 0.81
CUL4A-209ENST00000488558 NOX1Q9Y5S8 564 aa20.13■□□□□ 0.81
CUL4A-209ENST00000488558 INAFM1C9JVW0 142 aa20.12■□□□□ 0.81
CUL4A-209ENST00000488558 HPRP00739 348 aa20.12■□□□□ 0.81
CUL4A-209ENST00000488558 IGKV3-15P01624 115 aa20.12■□□□□ 0.81
CUL4A-209ENST00000488558 CRYAAP02489 173 aa20.12■□□□□ 0.81
CUL4A-209ENST00000488558 TROVE2P10155 538 aaKnown RBP eCLIP20.12■□□□□ 0.81
CUL4A-209ENST00000488558 PCSK6P29122 969 aa20.12■□□□□ 0.81
CUL4A-209ENST00000488558 ARF1P84077 181 aaKnown RBP20.12■□□□□ 0.81
CUL4A-209ENST00000488558 IL1RL1Q01638 556 aa20.12■□□□□ 0.81
CUL4A-209ENST00000488558 PUDPQ08623 228 aa20.12■□□□□ 0.81
CUL4A-209ENST00000488558 CYLC2Q14093 348 aaPredicted RBP20.12■□□□□ 0.81
CUL4A-209ENST00000488558 RAB35Q15286 201 aa20.12■□□□□ 0.81
CUL4A-209ENST00000488558 NPTX1Q15818 432 aa20.12■□□□□ 0.81
CUL4A-209ENST00000488558 CCDC36Q8IYA8 594 aa20.12■□□□□ 0.81
CUL4A-209ENST00000488558 OR6T1Q8NGN1 323 aa20.12■□□□□ 0.81
CUL4A-209ENST00000488558 OR10A6Q8NH74 314 aa20.12■□□□□ 0.81
CUL4A-209ENST00000488558 LRR1Q96L50 414 aa20.12■□□□□ 0.81
CUL4A-209ENST00000488558 MOGAT1Q96PD6 335 aa20.12■□□□□ 0.81
CUL4A-209ENST00000488558 SH3GL1Q99961 368 aa20.12■□□□□ 0.81
CUL4A-209ENST00000488558 PCDHAC1Q9H158 963 aa20.12■□□□□ 0.81
CUL4A-209ENST00000488558 CRLF2Q9HC73 371 aa20.12■□□□□ 0.81
CUL4A-209ENST00000488558 PMF1-BGLAPU3KQ54 211 aa20.12■□□□□ 0.81
CUL4A-209ENST00000488558 A0A096LPE4 126 aa20.11■□□□□ 0.81
CUL4A-209ENST00000488558 A0A1W2PPZ6 126 aa20.11■□□□□ 0.81
CUL4A-209ENST00000488558 ZNF99A8MXY4 864 aaPredicted RBP20.11■□□□□ 0.81
CUL4A-209ENST00000488558 FBP2O00757 339 aa20.11■□□□□ 0.81
CUL4A-209ENST00000488558 PDE5AO76074 875 aa20.11■□□□□ 0.81
CUL4A-209ENST00000488558 CD247P20963 164 aa20.11■□□□□ 0.81
CUL4A-209ENST00000488558 CBLP22681 906 aa20.11■□□□□ 0.81
CUL4A-209ENST00000488558 GZMMP51124 257 aa20.11■□□□□ 0.81
CUL4A-209ENST00000488558 NAAAQ02083 359 aa20.11■□□□□ 0.81
CUL4A-209ENST00000488558 POU3F1Q03052 451 aaPredicted RBP20.11■□□□□ 0.81
CUL4A-209ENST00000488558 PMS2P3Q13401 168 aa20.11■□□□□ 0.81
CUL4A-209ENST00000488558 VMACQ2NL98 169 aa20.11■□□□□ 0.81
CUL4A-209ENST00000488558 CEACAM16Q2WEN9 425 aa20.11■□□□□ 0.81
CUL4A-209ENST00000488558 CLEC2AQ6UVW9 174 aa20.11■□□□□ 0.81
CUL4A-209ENST00000488558 NHLRC1Q6VVB1 395 aa20.11■□□□□ 0.81
CUL4A-209ENST00000488558 CCDC80Q76M96 950 aa20.11■□□□□ 0.81
CUL4A-209ENST00000488558 PXKQ7Z7A4 578 aa20.11■□□□□ 0.81
CUL4A-209ENST00000488558 OR10H5Q8NGA6 315 aa20.11■□□□□ 0.81
CUL4A-209ENST00000488558 OR8J3Q8NGG0 315 aa20.11■□□□□ 0.81
CUL4A-209ENST00000488558 TAMM41Q96BW9 452 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms