RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 THOC3Q96J01 351 aaKnown RBP11.47□□□□□ -0.57
NELFE-209ENST00000488426 COG8Q96MW5 612 aa11.47□□□□□ -0.57
NELFE-209ENST00000488426 KATNB1Q9BVA0 655 aa11.47□□□□□ -0.57
NELFE-209ENST00000488426 FUNDC2Q9BWH2 189 aa11.47□□□□□ -0.57
NELFE-209ENST00000488426 MND1Q9BWT6 205 aa11.47□□□□□ -0.57
NELFE-209ENST00000488426 SERINC1Q9NRX5 453 aa11.47□□□□□ -0.57
NELFE-209ENST00000488426 TEKT2Q9UIF3 430 aa11.47□□□□□ -0.57
NELFE-209ENST00000488426 EXOGQ9Y2C4 368 aaKnown RBP11.47□□□□□ -0.57
NELFE-209ENST00000488426 EXOSC1Q9Y3B2 195 aaKnown RBP11.47□□□□□ -0.57
NELFE-209ENST00000488426 ASH1LQ9NR48 2969 aaKnown RBP11.47□□□□□ -0.57
NELFE-209ENST00000488426 RP1L1Q8IWN7 2480 aaPredicted RBP11.47□□□□□ -0.57
NELFE-209ENST00000488426 TXNDC12O95881 172 aa11.46□□□□□ -0.57
NELFE-209ENST00000488426 HIST1H1CP16403 213 aaKnown RBP11.46□□□□□ -0.57
NELFE-209ENST00000488426 ZNF24P17028 368 aa11.46□□□□□ -0.57
NELFE-209ENST00000488426 MYL12AP19105 171 aa11.46□□□□□ -0.57
NELFE-209ENST00000488426 FKBP2P26885 142 aaKnown RBP11.46□□□□□ -0.57
NELFE-209ENST00000488426 GSTT1P30711 240 aa11.46□□□□□ -0.57
NELFE-209ENST00000488426 CCL11P51671 97 aa11.46□□□□□ -0.57
NELFE-209ENST00000488426 RPL18Q07020 188 aaKnown RBP11.46□□□□□ -0.57
NELFE-209ENST00000488426 TIGD6Q17RP2 521 aa11.46□□□□□ -0.57
NELFE-209ENST00000488426 GXYLT1Q4G148 440 aa11.46□□□□□ -0.57
NELFE-209ENST00000488426 DCAF10Q5QP82 559 aa11.46□□□□□ -0.57
NELFE-209ENST00000488426 B3GNTL1Q67FW5 361 aaPredicted RBP11.46□□□□□ -0.57
NELFE-209ENST00000488426 PROKR2Q8NFJ6 384 aa11.46□□□□□ -0.57
NELFE-209ENST00000488426 OR5J2Q8NH18 312 aa11.46□□□□□ -0.57
NELFE-209ENST00000488426 OTULINQ96BN8 352 aa11.46□□□□□ -0.57
NELFE-209ENST00000488426 ZBTB8AQ96BR9 441 aa11.46□□□□□ -0.57
NELFE-209ENST00000488426 C12orf43Q96C57 262 aaKnown RBP11.46□□□□□ -0.57
NELFE-209ENST00000488426 FER1L6-AS2Q96M78 137 aa11.46□□□□□ -0.57
NELFE-209ENST00000488426 JAM3Q9BX67 310 aa11.46□□□□□ -0.57
NELFE-209ENST00000488426 POTEKPQ9BYX7 375 aa11.46□□□□□ -0.57
NELFE-209ENST00000488426 PROK2Q9HC23 129 aa11.46□□□□□ -0.57
NELFE-209ENST00000488426 TAS2R16Q9NYV7 291 aa11.46□□□□□ -0.57
NELFE-209ENST00000488426 ENPP5Q9UJA9 477 aa11.46□□□□□ -0.57
NELFE-209ENST00000488426 TUBD1Q9UJT1 453 aa11.46□□□□□ -0.57
NELFE-209ENST00000488426 FBXL2Q9UKC9 423 aa11.46□□□□□ -0.57
NELFE-209ENST00000488426 ADAM18Q9Y3Q7 739 aa11.46□□□□□ -0.57
NELFE-209ENST00000488426 CORINQ9Y5Q5 1042 aa11.46□□□□□ -0.57
NELFE-209ENST00000488426 SPIN1Q9Y657 262 aaPredicted RBP11.46□□□□□ -0.57
NELFE-209ENST00000488426 EML6Q6ZMW3 1958 aa11.46□□□□□ -0.57
NELFE-209ENST00000488426 CNTRLQ7Z7A1 2325 aa11.46□□□□□ -0.57
NELFE-209ENST00000488426 H3BMQ9 156 aa11.46□□□□□ -0.58
NELFE-209ENST00000488426 P04436 131 aa11.46□□□□□ -0.58
NELFE-209ENST00000488426 SFTPCP11686 197 aa11.46□□□□□ -0.58
NELFE-209ENST00000488426 SLC2A5P22732 501 aa11.46□□□□□ -0.58
NELFE-209ENST00000488426 SDHAP31040 664 aa11.46□□□□□ -0.58
NELFE-209ENST00000488426 SH3BGRP55822 239 aaPredicted RBP11.46□□□□□ -0.58
NELFE-209ENST00000488426 CTXN1P60606 82 aa11.46□□□□□ -0.58
NELFE-209ENST00000488426 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.46□□□□□ -0.58
NELFE-209ENST00000488426 IGFBP7Q16270 282 aa11.46□□□□□ -0.58
NELFE-209ENST00000488426 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.46□□□□□ -0.588e-9■■■■□ 19.8
NELFE-209ENST00000488426 ZNF468Q5VIY5 522 aaPredicted RBP11.46□□□□□ -0.58
NELFE-209ENST00000488426 C1QL3Q5VWW1 255 aa11.46□□□□□ -0.58
NELFE-209ENST00000488426 GPR139Q6DWJ6 353 aa11.46□□□□□ -0.58
NELFE-209ENST00000488426 C3orf33Q6P1S2 294 aa11.46□□□□□ -0.58
NELFE-209ENST00000488426 FAM122BQ7Z309 247 aa11.46□□□□□ -0.58
NELFE-209ENST00000488426 NANOGP1Q8N7R0 232 aa11.46□□□□□ -0.58
NELFE-209ENST00000488426 FAM98AQ8NCA5 519 aaKnown RBP11.46□□□□□ -0.58
NELFE-209ENST00000488426 OR52E2Q8NGJ4 325 aa11.46□□□□□ -0.58
NELFE-209ENST00000488426 MFSD8Q8NHS3 518 aa11.46□□□□□ -0.58
NELFE-209ENST00000488426 POC1BQ8TC44 478 aa11.46□□□□□ -0.58
NELFE-209ENST00000488426 PTP4A1Q93096 173 aa11.46□□□□□ -0.58
NELFE-209ENST00000488426 ASPNQ9BXN1 380 aa11.46□□□□□ -0.58
NELFE-209ENST00000488426 OR11A1Q9GZK7 315 aa11.46□□□□□ -0.58
NELFE-209ENST00000488426 MED20Q9H944 212 aa11.46□□□□□ -0.58
NELFE-209ENST00000488426 MRPL39Q9NYK5 338 aaKnown RBP11.46□□□□□ -0.58
NELFE-209ENST00000488426 ABI3Q9P2A4 366 aa11.46□□□□□ -0.58
NELFE-209ENST00000488426 LSM2Q9Y333 95 aaKnown RBP11.46□□□□□ -0.58
NELFE-209ENST00000488426 UBR5O95071 2799 aaPredicted RBP11.46□□□□□ -0.58
NELFE-209ENST00000488426 TRIM64BA6NI03 449 aa11.45□□□□□ -0.58
NELFE-209ENST00000488426 FTCDNL1E5RQL4 147 aa11.45□□□□□ -0.58
NELFE-209ENST00000488426 CDK2AP1O14519 115 aa11.45□□□□□ -0.58
NELFE-209ENST00000488426 MYL12BO14950 172 aa11.45□□□□□ -0.58
NELFE-209ENST00000488426 FZD7O75084 574 aa11.45□□□□□ -0.58
NELFE-209ENST00000488426 GABARAPO95166 117 aa11.45□□□□□ -0.58
NELFE-209ENST00000488426 IGHA1P01876 353 aa11.45□□□□□ -0.58
NELFE-209ENST00000488426 CYB561P49447 251 aa11.45□□□□□ -0.58
NELFE-209ENST00000488426 ERVK-25P63136 954 aa11.45□□□□□ -0.58
NELFE-209ENST00000488426 TLE1Q04724 770 aa11.45□□□□□ -0.58
NELFE-209ENST00000488426 POU4F2Q12837 409 aa11.45□□□□□ -0.58
NELFE-209ENST00000488426 C1DQ13901 141 aaKnown RBP11.45□□□□□ -0.58
NELFE-209ENST00000488426 INPP5JQ15735 1006 aaPredicted RBP11.45□□□□□ -0.58
NELFE-209ENST00000488426 P2RY8Q86VZ1 359 aa11.45□□□□□ -0.58
NELFE-209ENST00000488426 BEST3Q8N1M1 668 aa11.45□□□□□ -0.58
NELFE-209ENST00000488426 SCAIQ8N9R8 606 aa11.45□□□□□ -0.58
NELFE-209ENST00000488426 PSD4Q8NDX1 1056 aa11.45□□□□□ -0.58
NELFE-209ENST00000488426 SDR9C7Q8NEX9 313 aa11.45□□□□□ -0.58
NELFE-209ENST00000488426 OR1J4Q8NGS1 313 aa11.45□□□□□ -0.58
NELFE-209ENST00000488426 OR4K13Q8NH42 304 aa11.45□□□□□ -0.58
NELFE-209ENST00000488426 SLC25A43Q8WUT9 341 aaPredicted RBP11.45□□□□□ -0.58
NELFE-209ENST00000488426 C17orf50Q8WW18 174 aa11.45□□□□□ -0.58
NELFE-209ENST00000488426 KISS1RQ969F8 398 aaPredicted RBP11.45□□□□□ -0.58
NELFE-209ENST00000488426 SLC25A36Q96CQ1 311 aa11.45□□□□□ -0.58
NELFE-209ENST00000488426 NPAS1Q99742 590 aa11.45□□□□□ -0.58
NELFE-209ENST00000488426 HCAR1Q9BXC0 346 aa11.45□□□□□ -0.58
NELFE-209ENST00000488426 NAA50Q9GZZ1 169 aaKnown RBP11.45□□□□□ -0.58
NELFE-209ENST00000488426 KLHL1Q9NR64 748 aa11.45□□□□□ -0.58
NELFE-209ENST00000488426 SACM1LQ9NTJ5 587 aa11.45□□□□□ -0.58
NELFE-209ENST00000488426 HAO2Q9NYQ3 351 aa11.45□□□□□ -0.58
NELFE-209ENST00000488426 DOCK10Q96BY6 2186 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms