RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 MOSPD2Q8NHP6 518 aa9.79□□□□□ -0.84
UBE4B-210ENST00000488228 RNASE6Q93091 150 aaKnown RBP9.79□□□□□ -0.84
UBE4B-210ENST00000488228 APH1AQ96BI3 265 aa9.79□□□□□ -0.84
UBE4B-210ENST00000488228 OXGR1Q96P68 337 aa9.79□□□□□ -0.84
UBE4B-210ENST00000488228 ALPK1Q96QP1 1244 aa9.79□□□□□ -0.84
UBE4B-210ENST00000488228 SF3B5Q9BWJ5 86 aaKnown RBP9.79□□□□□ -0.84
UBE4B-210ENST00000488228 CHID1Q9BWS9 393 aa9.79□□□□□ -0.84
UBE4B-210ENST00000488228 SAMHD1Q9Y3Z3 626 aaKnown RBP9.79□□□□□ -0.84
UBE4B-210ENST00000488228 KLF2Q9Y5W3 355 aaPredicted RBP9.79□□□□□ -0.84
UBE4B-210ENST00000488228 U3KQV3 271 aa9.79□□□□□ -0.84
UBE4B-210ENST00000488228 A8MXE2 369 aa9.78□□□□□ -0.84
UBE4B-210ENST00000488228 MS4A18H0YCH9 400 aa9.78□□□□□ -0.84
UBE4B-210ENST00000488228 BLOC1S5-TXNDC5H3BN57 136 aa9.78□□□□□ -0.84
UBE4B-210ENST00000488228 CDC42EP2O14613 210 aa9.78□□□□□ -0.84
UBE4B-210ENST00000488228 OR6A2O95222 327 aa9.78□□□□□ -0.84
UBE4B-210ENST00000488228 IGF2P01344 180 aa9.78□□□□□ -0.84
UBE4B-210ENST00000488228 ZNF43P17038 809 aa9.78□□□□□ -0.84
UBE4B-210ENST00000488228 AHCYP23526 432 aa9.78□□□□□ -0.84
UBE4B-210ENST00000488228 AQP2P41181 271 aa9.78□□□□□ -0.84
UBE4B-210ENST00000488228 LIMS1P48059 325 aa9.78□□□□□ -0.84
UBE4B-210ENST00000488228 SELENOPP49908 381 aa9.78□□□□□ -0.84
UBE4B-210ENST00000488228 IST1P53990 364 aa9.78□□□□□ -0.84
UBE4B-210ENST00000488228 SMIM11AP58511 58 aa9.78□□□□□ -0.84
UBE4B-210ENST00000488228 RPS4XP62701 263 aaKnown RBP9.78□□□□□ -0.84
UBE4B-210ENST00000488228 C1DQ13901 141 aaKnown RBP9.78□□□□□ -0.84
UBE4B-210ENST00000488228 MELKQ14680 651 aa9.78□□□□□ -0.84
UBE4B-210ENST00000488228 MS4A18Q3C1V0 323 aa9.78□□□□□ -0.84
UBE4B-210ENST00000488228 FBXL19-AS1Q494R0 122 aa9.78□□□□□ -0.84
UBE4B-210ENST00000488228 OR2T5Q6IEZ7 315 aa9.78□□□□□ -0.84
UBE4B-210ENST00000488228 CREB3L2Q70SY1 520 aa9.78□□□□□ -0.84
UBE4B-210ENST00000488228 AAED1Q7RTV5 226 aa9.78□□□□□ -0.84
UBE4B-210ENST00000488228 YTHDF3Q7Z739 585 aaKnown RBP9.78□□□□□ -0.84
UBE4B-210ENST00000488228 OR9Q2Q8NGE9 314 aa9.78□□□□□ -0.84
UBE4B-210ENST00000488228 OR4C15Q8NGM1 316 aa9.78□□□□□ -0.84
UBE4B-210ENST00000488228 OR2T29Q8NH02 315 aa9.78□□□□□ -0.84
UBE4B-210ENST00000488228 POP5Q969H6 163 aaKnown RBP9.78□□□□□ -0.84
UBE4B-210ENST00000488228 TMEM45BQ96B21 275 aa9.78□□□□□ -0.84
UBE4B-210ENST00000488228 ALKBH3Q96Q83 286 aaPredicted RBP9.78□□□□□ -0.84
UBE4B-210ENST00000488228 REEP1Q9H902 201 aa9.78□□□□□ -0.84
UBE4B-210ENST00000488228 PLSCR4Q9NRQ2 329 aa9.78□□□□□ -0.84
UBE4B-210ENST00000488228 MED29Q9NX70 200 aa9.78□□□□□ -0.84
UBE4B-210ENST00000488228 TAS2R5Q9NYW4 299 aa9.78□□□□□ -0.84
UBE4B-210ENST00000488228 ABCA12Q86UK0 2595 aa9.78□□□□□ -0.84
UBE4B-210ENST00000488228 ERICH4A6NGS2 130 aa9.77□□□□□ -0.85
UBE4B-210ENST00000488228 TNFRSF11BO00300 401 aa9.77□□□□□ -0.85
UBE4B-210ENST00000488228 RNF13O43567 381 aa9.77□□□□□ -0.85
UBE4B-210ENST00000488228 OR10H3O60404 316 aa9.77□□□□□ -0.85
UBE4B-210ENST00000488228 MRPL33O75394 65 aaKnown RBP9.77□□□□□ -0.85
UBE4B-210ENST00000488228 TIPRLO75663 272 aa9.77□□□□□ -0.85
UBE4B-210ENST00000488228 CST1P01037 141 aa9.77□□□□□ -0.85
UBE4B-210ENST00000488228 HIST1H2ABP04908 130 aa9.77□□□□□ -0.85
UBE4B-210ENST00000488228 F13BP05160 661 aa9.77□□□□□ -0.85
UBE4B-210ENST00000488228 POU2F1P14859 743 aa9.77□□□□□ -0.85
UBE4B-210ENST00000488228 IFNGR1P15260 489 aa9.77□□□□□ -0.85
UBE4B-210ENST00000488228 CD79BP40259 229 aa9.77□□□□□ -0.85
UBE4B-210ENST00000488228 OMPP47874 163 aa9.77□□□□□ -0.85
UBE4B-210ENST00000488228 FAM27E3Q08E93 113 aa9.77□□□□□ -0.85
UBE4B-210ENST00000488228 TOP3AQ13472 1001 aaPredicted RBP9.77□□□□□ -0.85
UBE4B-210ENST00000488228 FHL1Q13642 323 aa9.77□□□□□ -0.85
UBE4B-210ENST00000488228 KPNB1Q14974 876 aaKnown RBP9.77□□□□□ -0.85
UBE4B-210ENST00000488228 TSC22D1Q15714 1073 aa9.77□□□□□ -0.85
UBE4B-210ENST00000488228 ZSCAN26Q16670 478 aa9.77□□□□□ -0.85
UBE4B-210ENST00000488228 CARD17Q5XLA6 110 aa9.77□□□□□ -0.85
UBE4B-210ENST00000488228 NIPAL3Q6P499 406 aa9.77□□□□□ -0.85
UBE4B-210ENST00000488228 HIST3H2AQ7L7L0 130 aa9.77□□□□□ -0.85
UBE4B-210ENST00000488228 RRM2BQ7LG56 351 aa9.77□□□□□ -0.85
UBE4B-210ENST00000488228 STK32CQ86UX6 486 aa9.77□□□□□ -0.85
UBE4B-210ENST00000488228 IGFN1Q86VF2 1251 aa9.77□□□□□ -0.85
UBE4B-210ENST00000488228 CXorf67Q86X51 503 aaPredicted RBP9.77□□□□□ -0.85
UBE4B-210ENST00000488228 RNF113BQ8IZP6 322 aaKnown RBP9.77□□□□□ -0.85
UBE4B-210ENST00000488228 GABRG1Q8N1C3 465 aa9.77□□□□□ -0.85
UBE4B-210ENST00000488228 UBE2J2Q8N2K1 259 aa9.77□□□□□ -0.85
UBE4B-210ENST00000488228 OR51A7Q8NH64 312 aa9.77□□□□□ -0.85
UBE4B-210ENST00000488228 LIPHQ8WWY8 451 aa9.77□□□□□ -0.85
UBE4B-210ENST00000488228 HIST1H2ACQ93077 130 aa9.77□□□□□ -0.85
UBE4B-210ENST00000488228 GPA33Q99795 319 aa9.77□□□□□ -0.85
UBE4B-210ENST00000488228 EMC6Q9BV81 110 aa9.77□□□□□ -0.85
UBE4B-210ENST00000488228 MCCC2Q9HCC0 563 aa9.77□□□□□ -0.85
UBE4B-210ENST00000488228 CCM2LQ9NUG4 571 aaPredicted RBP9.77□□□□□ -0.85
UBE4B-210ENST00000488228 TMCC3Q9ULS5 477 aa9.77□□□□□ -0.85
UBE4B-210ENST00000488228 TMEM5Q9Y2B1 443 aa9.77□□□□□ -0.85
UBE4B-210ENST00000488228 NOX1Q9Y5S8 564 aa9.77□□□□□ -0.85
UBE4B-210ENST00000488228 DCHS2Q6V1P9 2916 aa9.77□□□□□ -0.85
UBE4B-210ENST00000488228 CLOCKO15516 846 aa9.76□□□□□ -0.85
UBE4B-210ENST00000488228 KLF4O43474 513 aa9.76□□□□□ -0.85
UBE4B-210ENST00000488228 KRT36O76013 467 aa9.76□□□□□ -0.85
UBE4B-210ENST00000488228 CCNB2O95067 398 aa9.76□□□□□ -0.85
UBE4B-210ENST00000488228 ZNF26P17031 533 aaPredicted RBP9.76□□□□□ -0.85
UBE4B-210ENST00000488228 IGFBP2P18065 325 aa9.76□□□□□ -0.85
UBE4B-210ENST00000488228 FOXG1P55316 489 aaPredicted RBP9.76□□□□□ -0.85
UBE4B-210ENST00000488228 ACTR3P61158 418 aa9.76□□□□□ -0.85
UBE4B-210ENST00000488228 ALG10Q5BKT4 473 aa9.76□□□□□ -0.85
UBE4B-210ENST00000488228 TSPO2Q5TGU0 170 aa9.76□□□□□ -0.85
UBE4B-210ENST00000488228 C9orf135Q5VTT2 229 aa9.76□□□□□ -0.85
UBE4B-210ENST00000488228 PGBD2Q6P3X8 592 aa9.76□□□□□ -0.85
UBE4B-210ENST00000488228 NHLRC1Q6VVB1 395 aa9.76□□□□□ -0.85
UBE4B-210ENST00000488228 MEX3BQ6ZN04 569 aaKnown RBP9.76□□□□□ -0.85
UBE4B-210ENST00000488228 TMPRSS11FQ6ZWK6 438 aa9.76□□□□□ -0.85
UBE4B-210ENST00000488228 SLC35D2Q76EJ3 337 aa9.76□□□□□ -0.85
UBE4B-210ENST00000488228 PXKQ7Z7A4 578 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms