RNA–Protein interactions for RNA: ENST00000488217.1

TRIM50-203, Transcript of tripartite motif containing 50, humanhuman

TSL 2

Gene TRIM50, Length 548 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-203ENST00000488217 C5orf46Q6UWT4 87 aa13.29□□□□□ -0.28
TRIM50-203ENST00000488217 CCDC36Q8IYA8 594 aa13.29□□□□□ -0.28
TRIM50-203ENST00000488217 GPR137CQ8N3F9 429 aa13.29□□□□□ -0.28
TRIM50-203ENST00000488217 NUP37Q8NFH4 326 aa13.29□□□□□ -0.28
TRIM50-203ENST00000488217 DNAJA4Q8WW22 397 aaPredicted RBP13.29□□□□□ -0.28
TRIM50-203ENST00000488217 MSI2Q96DH6 328 aaKnown RBP13.29□□□□□ -0.28
TRIM50-203ENST00000488217 ZNF837Q96EG3 531 aaPredicted RBP13.29□□□□□ -0.28
TRIM50-203ENST00000488217 NELFAQ9H3P2 528 aa13.29□□□□□ -0.28
TRIM50-203ENST00000488217 CRLF2Q9HC73 371 aa13.29□□□□□ -0.28
TRIM50-203ENST00000488217 SEC14L4Q9UDX3 406 aa13.29□□□□□ -0.28
TRIM50-203ENST00000488217 KCNS2Q9ULS6 477 aa13.29□□□□□ -0.28
TRIM50-203ENST00000488217 STAB1Q9NY15 2570 aa13.28□□□□□ -0.28
TRIM50-203ENST00000488217 TRAV36DV7A0A075B6V5 113 aa13.28□□□□□ -0.28
TRIM50-203ENST00000488217 IGHV4-61A0A0C4DH41 118 aa13.28□□□□□ -0.28
TRIM50-203ENST00000488217 A0A1B0GWA3 101 aa13.28□□□□□ -0.28
TRIM50-203ENST00000488217 SLC35F4A4IF30 521 aa13.28□□□□□ -0.28
TRIM50-203ENST00000488217 MS4A18H0YCH9 400 aa13.28□□□□□ -0.28
TRIM50-203ENST00000488217 AIM2O14862 343 aa13.28□□□□□ -0.28
TRIM50-203ENST00000488217 FZD7O75084 574 aa13.28□□□□□ -0.28
TRIM50-203ENST00000488217 TGFAP01135 160 aa13.28□□□□□ -0.28
TRIM50-203ENST00000488217 CELA3BP08861 270 aa13.28□□□□□ -0.28
TRIM50-203ENST00000488217 APEHP13798 732 aaKnown RBP13.28□□□□□ -0.28
TRIM50-203ENST00000488217 ZNF16P17020 682 aaPredicted RBP13.28□□□□□ -0.28
TRIM50-203ENST00000488217 NPR2P20594 1047 aa13.28□□□□□ -0.28
TRIM50-203ENST00000488217 GRPRP30550 384 aa13.28□□□□□ -0.28
TRIM50-203ENST00000488217 MS4A18Q3C1V0 323 aa13.28□□□□□ -0.28
TRIM50-203ENST00000488217 FAM120AOSQ5T036 256 aa13.28□□□□□ -0.28
TRIM50-203ENST00000488217 FAM69AQ5T7M9 428 aa13.28□□□□□ -0.28
TRIM50-203ENST00000488217 ULK3Q6PHR2 472 aa13.28□□□□□ -0.28
TRIM50-203ENST00000488217 GOLGA6L1Q8N7Z2 621 aa13.28□□□□□ -0.28
TRIM50-203ENST00000488217 PIK3C3Q8NEB9 887 aa13.28□□□□□ -0.28
TRIM50-203ENST00000488217 NEU4Q8WWR8 484 aaPredicted RBP13.28□□□□□ -0.28
TRIM50-203ENST00000488217 SLC38A4Q969I6 547 aa13.28□□□□□ -0.28
TRIM50-203ENST00000488217 ANKRD27Q96NW4 1050 aa13.28□□□□□ -0.28
TRIM50-203ENST00000488217 ZNF442Q9H7R0 627 aa13.28□□□□□ -0.28
TRIM50-203ENST00000488217 VIPAS39Q9H9C1 493 aa13.28□□□□□ -0.28
TRIM50-203ENST00000488217 SEC61A2Q9H9S3 476 aa13.28□□□□□ -0.28
TRIM50-203ENST00000488217 SLAMF8Q9P0V8 285 aa13.28□□□□□ -0.28
TRIM50-203ENST00000488217 USH1CQ9Y6N9 552 aa13.28□□□□□ -0.28
TRIM50-203ENST00000488217 CR1P17927 2039 aa13.28□□□□□ -0.28
TRIM50-203ENST00000488217 TMEM129A0AVI4 362 aa13.27□□□□□ -0.29
TRIM50-203ENST00000488217 M0R082 166 aa13.27□□□□□ -0.29
TRIM50-203ENST00000488217 TPST1O60507 370 aa13.27□□□□□ -0.29
TRIM50-203ENST00000488217 STAMBPO95630 424 aa13.27□□□□□ -0.29
TRIM50-203ENST00000488217 ZNF23P17027 643 aa13.27□□□□□ -0.29
TRIM50-203ENST00000488217 SRD5A1P18405 259 aa13.27□□□□□ -0.29
TRIM50-203ENST00000488217 PPOXP50336 477 aa13.27□□□□□ -0.29
TRIM50-203ENST00000488217 CDK6Q00534 326 aa13.27□□□□□ -0.29
TRIM50-203ENST00000488217 CEACAM16Q2WEN9 425 aa13.27□□□□□ -0.29
TRIM50-203ENST00000488217 ALG10BQ5I7T1 473 aa13.27□□□□□ -0.29
TRIM50-203ENST00000488217 REEP3Q6NUK4 255 aa13.27□□□□□ -0.29
TRIM50-203ENST00000488217 BLOC1S3Q6QNY0 202 aa13.27□□□□□ -0.29
TRIM50-203ENST00000488217 KRT73Q86Y46 540 aa13.27□□□□□ -0.29
TRIM50-203ENST00000488217 FUNDC1Q8IVP5 155 aa13.27□□□□□ -0.29
TRIM50-203ENST00000488217 ZCCHC24Q8N2G6 241 aaKnown RBP13.27□□□□□ -0.29
TRIM50-203ENST00000488217 ZNF417Q8TAU3 575 aa13.27□□□□□ -0.29
TRIM50-203ENST00000488217 TLCD1Q96CP7 247 aa13.27□□□□□ -0.29
TRIM50-203ENST00000488217 SLC47A1Q96FL8 570 aa13.27□□□□□ -0.29
TRIM50-203ENST00000488217 OR2M2Q96R28 347 aa13.27□□□□□ -0.29
TRIM50-203ENST00000488217 ZNF587Q96SQ5 575 aaPredicted RBP13.27□□□□□ -0.29
TRIM50-203ENST00000488217 SPATA5L1Q9BVQ7 753 aa13.27□□□□□ -0.29
TRIM50-203ENST00000488217 CHODLQ9H9P2 273 aa13.27□□□□□ -0.29
TRIM50-203ENST00000488217 TMBIM4Q9HC24 238 aa13.27□□□□□ -0.29
TRIM50-203ENST00000488217 ZNF446Q9NWS9 450 aa13.27□□□□□ -0.29
TRIM50-203ENST00000488217 SLC25A37Q9NYZ2 338 aa13.27□□□□□ -0.29
TRIM50-203ENST00000488217 IGKV1D-42A0A075B6H8 117 aa13.26□□□□□ -0.29
TRIM50-203ENST00000488217 SH3PXD2BA1X283 911 aa13.26□□□□□ -0.29
TRIM50-203ENST00000488217 hCG_2039718K7EN88 272 aa13.26□□□□□ -0.29
TRIM50-203ENST00000488217 M0R3G1 203 aa13.26□□□□□ -0.29
TRIM50-203ENST00000488217 SASH3O75995 380 aa13.26□□□□□ -0.29
TRIM50-203ENST00000488217 TGDSO95455 350 aa13.26□□□□□ -0.29
TRIM50-203ENST00000488217 ERCC1P07992 297 aaPredicted RBP13.26□□□□□ -0.29
TRIM50-203ENST00000488217 DAOP14920 347 aa13.26□□□□□ -0.29
TRIM50-203ENST00000488217 HOXB9P17482 250 aaPredicted RBP13.26□□□□□ -0.29
TRIM50-203ENST00000488217 CBLP22681 906 aa13.26□□□□□ -0.29
TRIM50-203ENST00000488217 IGFBP5P24593 272 aa13.26□□□□□ -0.29
TRIM50-203ENST00000488217 GIFP27352 417 aa13.26□□□□□ -0.29
TRIM50-203ENST00000488217 HTR2AP28223 471 aa13.26□□□□□ -0.29
TRIM50-203ENST00000488217 MRPL19P49406 292 aaKnown RBP13.26□□□□□ -0.29
TRIM50-203ENST00000488217 STX1BP61266 288 aa13.26□□□□□ -0.29
TRIM50-203ENST00000488217 IL1RL1Q01638 556 aa13.26□□□□□ -0.29
TRIM50-203ENST00000488217 MFSD13AQ14CX5 517 aa13.26□□□□□ -0.29
TRIM50-203ENST00000488217 LRIF1Q5T3J3 769 aa13.26□□□□□ -0.29
TRIM50-203ENST00000488217 GCNT6Q5T4J0 391 aa13.26□□□□□ -0.29
TRIM50-203ENST00000488217 FAM91A1Q658Y4 838 aa13.26□□□□□ -0.29
TRIM50-203ENST00000488217 DHRS4L2Q6PKH6 230 aa13.26□□□□□ -0.29
TRIM50-203ENST00000488217 NHLRC1Q6VVB1 395 aa13.26□□□□□ -0.29
TRIM50-203ENST00000488217 SPATA21Q7Z572 469 aa13.26□□□□□ -0.29
TRIM50-203ENST00000488217 MDP1Q86V88 176 aa13.26□□□□□ -0.29
TRIM50-203ENST00000488217 UEVLDQ8IX04 471 aa13.26□□□□□ -0.29
TRIM50-203ENST00000488217 C20orf196Q8IYI0 205 aa13.26□□□□□ -0.29
TRIM50-203ENST00000488217 TMEM123Q8N131 208 aa13.26□□□□□ -0.29
TRIM50-203ENST00000488217 SVOPLQ8N434 492 aa13.26□□□□□ -0.29
TRIM50-203ENST00000488217 OR6S1Q8NH40 331 aa13.26□□□□□ -0.29
TRIM50-203ENST00000488217 NFKBIDQ8NI38 313 aa13.26□□□□□ -0.29
TRIM50-203ENST00000488217 LRR1Q96L50 414 aa13.26□□□□□ -0.29
TRIM50-203ENST00000488217 BPESC1Q9GZL8 116 aa13.26□□□□□ -0.29
TRIM50-203ENST00000488217 TMEM27Q9HBJ8 222 aa13.26□□□□□ -0.29
TRIM50-203ENST00000488217 B3GNT2Q9NY97 397 aa13.26□□□□□ -0.29
TRIM50-203ENST00000488217 SELENONQ9NZV5 590 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms