RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 ING1Q9UK53 422 aaPredicted RBP13.97□□□□□ -0.17
C9orf3-219ENST00000488186 SAMHD1Q9Y3Z3 626 aaKnown RBP13.97□□□□□ -0.17
C9orf3-219ENST00000488186 NOX1Q9Y5S8 564 aa13.97□□□□□ -0.17
C9orf3-219ENST00000488186 ADGRG4Q8IZF6 3080 aa13.97□□□□□ -0.17
C9orf3-219ENST00000488186 HCFC1P51610 2035 aa13.97□□□□□ -0.17
C9orf3-219ENST00000488186 PKDREJQ9NTG1 2253 aa13.96□□□□□ -0.17
C9orf3-219ENST00000488186 SH3PXD2BA1X283 911 aa13.96□□□□□ -0.17
C9orf3-219ENST00000488186 ZNF726A6NNF4 738 aa13.96□□□□□ -0.17
C9orf3-219ENST00000488186 FKBP6O75344 327 aa13.96□□□□□ -0.17
C9orf3-219ENST00000488186 CGAP01215 116 aa13.96□□□□□ -0.17
C9orf3-219ENST00000488186 ASAH2BP0C7U1 165 aa13.96□□□□□ -0.17
C9orf3-219ENST00000488186 POU2F1P14859 743 aa13.96□□□□□ -0.17
C9orf3-219ENST00000488186 MAKP20794 623 aa13.96□□□□□ -0.17
C9orf3-219ENST00000488186 OR3A2P47893 321 aa13.96□□□□□ -0.17
C9orf3-219ENST00000488186 SLC9A3P48764 834 aa13.96□□□□□ -0.17
C9orf3-219ENST00000488186 CLDN17P56750 224 aa13.96□□□□□ -0.17
C9orf3-219ENST00000488186 POU3F1Q03052 451 aaPredicted RBP13.96□□□□□ -0.17
C9orf3-219ENST00000488186 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.96□□□□□ -0.17
C9orf3-219ENST00000488186 SLC46A3Q7Z3Q1 461 aa13.96□□□□□ -0.17
C9orf3-219ENST00000488186 PXKQ7Z7A4 578 aa13.96□□□□□ -0.17
C9orf3-219ENST00000488186 MEX3DQ86XN8 651 aaKnown RBP13.96□□□□□ -0.17
C9orf3-219ENST00000488186 ACBD4Q8NC06 268 aa13.96□□□□□ -0.17
C9orf3-219ENST00000488186 ANKK1Q8NFD2 765 aa13.96□□□□□ -0.17
C9orf3-219ENST00000488186 UTP4Q969X6 686 aaKnown RBP13.96□□□□□ -0.17
C9orf3-219ENST00000488186 FAM46AQ96IP4 442 aaKnown RBP13.96□□□□□ -0.17
C9orf3-219ENST00000488186 ELOVL5Q9NYP7 299 aa13.96□□□□□ -0.17
C9orf3-219ENST00000488186 JKAMPQ9P055 326 aa13.96□□□□□ -0.17
C9orf3-219ENST00000488186 U3KQV3 271 aa13.96□□□□□ -0.17
C9orf3-219ENST00000488186 CENPEQ02224 2701 aa13.96□□□□□ -0.18
C9orf3-219ENST00000488186 LOC102725191A0A1B0GVB3 256 aa13.95□□□□□ -0.18
C9orf3-219ENST00000488186 A0A1W2PRG6 482 aa13.95□□□□□ -0.18
C9orf3-219ENST00000488186 FZD7O75084 574 aa13.95□□□□□ -0.18
C9orf3-219ENST00000488186 E2F6O75461 281 aa13.95□□□□□ -0.18
C9orf3-219ENST00000488186 CCNB2O95067 398 aa13.95□□□□□ -0.18
C9orf3-219ENST00000488186 AQP2P41181 271 aa13.95□□□□□ -0.18
C9orf3-219ENST00000488186 GPR4P46093 362 aa13.95□□□□□ -0.18
C9orf3-219ENST00000488186 ARHGDIAP52565 204 aa13.95□□□□□ -0.18
C9orf3-219ENST00000488186 HMGA2P52926 109 aa13.95□□□□□ -0.18
C9orf3-219ENST00000488186 LSM11P83369 360 aaKnown RBP eCLIP13.95□□□□□ -0.18
C9orf3-219ENST00000488186 ZP4Q12836 540 aa13.95□□□□□ -0.18
C9orf3-219ENST00000488186 LAPTM4AQ15012 233 aa13.95□□□□□ -0.18
C9orf3-219ENST00000488186 SEC23BQ15437 767 aa13.95□□□□□ -0.18
C9orf3-219ENST00000488186 ANKDD1AQ495B1 522 aa13.95□□□□□ -0.18
C9orf3-219ENST00000488186 SP5Q6BEB4 398 aaPredicted RBP13.95□□□□□ -0.18
C9orf3-219ENST00000488186 NIPAL3Q6P499 406 aa13.95□□□□□ -0.18
C9orf3-219ENST00000488186 TFAP2EQ6VUC0 442 aa13.95□□□□□ -0.18
C9orf3-219ENST00000488186 TMPRSS11FQ6ZWK6 438 aa13.95□□□□□ -0.18
C9orf3-219ENST00000488186 EPHX4Q8IUS5 362 aa13.95□□□□□ -0.18
C9orf3-219ENST00000488186 ZIC4Q8N9L1 334 aa13.95□□□□□ -0.18
C9orf3-219ENST00000488186 OR51A7Q8NH64 312 aa13.95□□□□□ -0.18
C9orf3-219ENST00000488186 GNPDA2Q8TDQ7 276 aa13.95□□□□□ -0.18
C9orf3-219ENST00000488186 LIPHQ8WWY8 451 aa13.95□□□□□ -0.18
C9orf3-219ENST00000488186 TMEM45BQ96B21 275 aa13.95□□□□□ -0.18
C9orf3-219ENST00000488186 ZNF385AQ96PM9 386 aaKnown RBP13.95□□□□□ -0.18
C9orf3-219ENST00000488186 GALNT8Q9NY28 637 aa13.95□□□□□ -0.18
C9orf3-219ENST00000488186 TAS2R5Q9NYW4 299 aa13.95□□□□□ -0.18
C9orf3-219ENST00000488186 AP4S1Q9Y587 144 aa13.95□□□□□ -0.18
C9orf3-219ENST00000488186 LYVE1Q9Y5Y7 322 aa13.95□□□□□ -0.18
C9orf3-219ENST00000488186 UNC79Q9P2D8 2635 aa13.95□□□□□ -0.18
C9orf3-219ENST00000488186 UNC119BA6NIH7 251 aa13.94□□□□□ -0.18
C9orf3-219ENST00000488186 OR6C65A6NJZ3 312 aa13.94□□□□□ -0.18
C9orf3-219ENST00000488186 SLC43A1O75387 559 aa13.94□□□□□ -0.18
C9orf3-219ENST00000488186 HPRP00739 348 aa13.94□□□□□ -0.18
C9orf3-219ENST00000488186 IGHV3-9P01782 118 aa13.94□□□□□ -0.18
C9orf3-219ENST00000488186 HLA-DOBP13765 273 aa13.94□□□□□ -0.18
C9orf3-219ENST00000488186 CD79BP40259 229 aa13.94□□□□□ -0.18
C9orf3-219ENST00000488186 PEX19P40855 299 aa13.94□□□□□ -0.18
C9orf3-219ENST00000488186 RPL18Q07020 188 aaKnown RBP13.94□□□□□ -0.18
C9orf3-219ENST00000488186 PPP1R8Q12972 351 aaKnown RBP13.94□□□□□ -0.18
C9orf3-219ENST00000488186 CCNIQ14094 377 aa13.94□□□□□ -0.18
C9orf3-219ENST00000488186 KPNB1Q14974 876 aaKnown RBP13.94□□□□□ -0.18
C9orf3-219ENST00000488186 FBXL19-AS1Q494R0 122 aa13.94□□□□□ -0.18
C9orf3-219ENST00000488186 ZBED5Q49AG3 693 aa13.94□□□□□ -0.18
C9orf3-219ENST00000488186 ALG10Q5BKT4 473 aa13.94□□□□□ -0.18
C9orf3-219ENST00000488186 ZNF474Q6S9Z5 364 aaPredicted RBP13.94□□□□□ -0.18
C9orf3-219ENST00000488186 SLC35D2Q76EJ3 337 aa13.94□□□□□ -0.18
C9orf3-219ENST00000488186 PAPD5Q8NDF8 572 aaKnown RBP13.94□□□□□ -0.18
C9orf3-219ENST00000488186 TNFRSF13CQ96RJ3 184 aa13.94□□□□□ -0.18
C9orf3-219ENST00000488186 INIPQ9NRY2 104 aa13.94□□□□□ -0.18
C9orf3-219ENST00000488186 B3GAT1Q9P2W7 334 aa13.94□□□□□ -0.18
C9orf3-219ENST00000488186 DNAJB9Q9UBS3 223 aa13.94□□□□□ -0.18
C9orf3-219ENST00000488186 TRAV27A0A087WT01 109 aa13.93□□□□□ -0.18
C9orf3-219ENST00000488186 MCIDASD6RGH6 385 aa13.93□□□□□ -0.18
C9orf3-219ENST00000488186 C16orf97H3BN30 126 aa13.93□□□□□ -0.18
C9orf3-219ENST00000488186 CLOCKO15516 846 aa13.93□□□□□ -0.18
C9orf3-219ENST00000488186 HNRNPRO43390 633 aaKnown RBP13.93□□□□□ -0.18
C9orf3-219ENST00000488186 DEAF1O75398 565 aaPredicted RBP13.93□□□□□ -0.18
C9orf3-219ENST00000488186 TIPRLO75663 272 aa13.93□□□□□ -0.18
C9orf3-219ENST00000488186 BCL10O95999 233 aa13.93□□□□□ -0.18
C9orf3-219ENST00000488186 ADAP00813 363 aa13.93□□□□□ -0.18
C9orf3-219ENST00000488186 F13BP05160 661 aa13.93□□□□□ -0.18
C9orf3-219ENST00000488186 IFNGR1P15260 489 aa13.93□□□□□ -0.18
C9orf3-219ENST00000488186 GRNP28799 593 aaKnown RBP13.93□□□□□ -0.18
C9orf3-219ENST00000488186 RPL4P36578 427 aaKnown RBP13.93□□□□□ -0.18
C9orf3-219ENST00000488186 OMPP47874 163 aa13.93□□□□□ -0.18
C9orf3-219ENST00000488186 PCYT1AP49585 367 aa13.93□□□□□ -0.18
C9orf3-219ENST00000488186 PRPS1P60891 318 aa13.93□□□□□ -0.18
C9orf3-219ENST00000488186 TFF3Q07654 80 aa13.93□□□□□ -0.18
C9orf3-219ENST00000488186 FAM27E3Q08E93 113 aa13.93□□□□□ -0.18
C9orf3-219ENST00000488186 GK3PQ14409 553 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms