RNA–Protein interactions for RNA: ENST00000486941.1

SNRNP40-205, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-205ENST00000486941 GRHL1Q9NZI5 618 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 VPS29Q9UBQ0 182 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 PCTPQ9UKL6 214 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 SNX6Q9UNH7 406 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 ABCG2Q9UNQ0 655 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 ZNF337Q9Y3M9 751 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 AP4B1Q9Y6B7 739 aa3.5□□□□□ -1.85
SNRNP40-205ENST00000486941 MALRD1Q5VYJ5 2156 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 A0A087WV62 115 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 IGLV3-32A0A0A0MS00 114 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 OR2M5A3KFT3 312 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 TMEM247A6NEH6 219 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 TTC36A6NLP5 189 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 FAM157AC9JC47 383 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 HS3ST1O14792 307 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 RAD51CO43502 376 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 SMIM24O75264 130 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 AQP8O94778 261 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 KDM4BO94953 1096 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 CH25HO95992 272 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 OTCP00480 354 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 KRT6AP02538 564 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 KRT6BP04259 564 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 RPS17P08708 135 aaKnown RBP3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 CTAGE8P0CG41 777 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 IGHV4-30-4P0DP06 118 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 HSD3B1P14060 373 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 EVI2BP34910 448 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 MPIP34949 423 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 KRT6CP48668 564 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 SERPINB8P50452 374 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 MVDP53602 400 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 ATP5J2P56134 94 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 CLDN20P56880 219 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 SIRPAP78324 504 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 MRPS25P82663 173 aaKnown RBP3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 CSTF3Q12996 717 aaKnown RBP3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 TNK1Q13470 666 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 HEPACAMQ14CZ8 416 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 PON3Q15166 354 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 LTB4RQ15722 352 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 SGCBQ16585 318 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 DECR1Q16698 335 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 TMEM44Q2T9K0 475 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 FAM180BQ6P0A1 224 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 PODNL1Q6PEZ8 512 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 NPSR1Q6W5P4 371 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 STAC2Q6ZMT1 411 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 ZNF704Q6ZNC4 412 aaPredicted RBP3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 EXOC3L1Q86VI1 746 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 CTAGE4Q8IX94 777 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 UBQLNLQ8IYU4 475 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 C1orf52Q8N6N3 182 aaKnown RBP3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 SPATA4Q8NEY3 305 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 OR9A2Q8NGT5 310 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 OR6K3Q8NGY3 331 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 FNDC9Q8TBE3 224 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 FBXO25Q8TCJ0 367 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 DUSP19Q8WTR2 217 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 SELENOMQ8WWX9 145 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 EXOSC8Q96B26 276 aaKnown RBP3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 EFHD2Q96C19 240 aaPredicted RBP3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 MTBPQ96DY7 904 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 ZC3HAV1LQ96H79 300 aaKnown RBP3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 GMPPAQ96IJ6 420 aaPredicted RBP3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 MRPL57Q9BQC6 102 aaKnown RBP3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 KLHL4Q9C0H6 718 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 RAB17Q9H0T7 212 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 ANKRA2Q9H9E1 313 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 FOLH1BQ9HBA9 442 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 HHATLQ9HCP6 504 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 PFDN4Q9NQP4 134 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 SLC35C2Q9NQQ7 365 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 GLRX2Q9NS18 164 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 FARSBQ9NSD9 589 aaKnown RBP3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 GIMAP4Q9NUV9 329 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 THAP1Q9NVV9 213 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 FAM120CQ9NX05 1096 aaKnown RBP3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 PAQR5Q9NXK6 330 aaPredicted RBP3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 TAS2R7Q9NYW3 318 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 MED11Q9P086 117 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 ZNF225Q9UK10 706 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 MRTO4Q9UKD2 239 aaKnown RBP3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 GPR52Q9Y2T5 361 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 UTP11Q9Y3A2 253 aaKnown RBP3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 OR10H1Q9Y4A9 318 aa3.49□□□□□ -1.85
SNRNP40-205ENST00000486941 A0A087WZY1 265 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 GNG14A0A1W2PPG7 69 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 C17orf51A8MQB3 221 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 RNF212BA8MTL3 300 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 MYO1GB0I1T2 1018 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 ZNF587BE7ETH6 402 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 H0YC42 278 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 MANBAO00462 879 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 ADAMDEC1O15204 470 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 SEC14L5O43304 696 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 TLX2O43763 284 aaPredicted RBP3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 SCO2O43819 266 aa3.48□□□□□ -1.85
SNRNP40-205ENST00000486941 CD5LO43866 347 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms