RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 KLHDC3Q9BQ90 382 aa16.35■□□□□ 0.21
PDLIM7-207ENST00000486828 NUDT9Q9BW91 350 aa16.35■□□□□ 0.21
PDLIM7-207ENST00000486828 NDEL1Q9GZM8 345 aa16.35■□□□□ 0.21
PDLIM7-207ENST00000486828 CLEC4AQ9UMR7 237 aa16.35■□□□□ 0.21
PDLIM7-207ENST00000486828 PCDH15Q96QU1 1955 aa16.35■□□□□ 0.21
PDLIM7-207ENST00000486828 TCRBV16S1A1N1A0A5B0 115 aa16.35■□□□□ 0.21
PDLIM7-207ENST00000486828 OR6C70A6NIJ9 312 aa16.35■□□□□ 0.21
PDLIM7-207ENST00000486828 FAM47E-STBD1D6RA91 191 aa16.35■□□□□ 0.21
PDLIM7-207ENST00000486828 PSMD9O00233 223 aa16.35■□□□□ 0.21
PDLIM7-207ENST00000486828 PIN1P1O15428 100 aa16.35■□□□□ 0.21
PDLIM7-207ENST00000486828 F13BP05160 661 aa16.35■□□□□ 0.21
PDLIM7-207ENST00000486828 SRMP19623 302 aa16.35■□□□□ 0.21
PDLIM7-207ENST00000486828 ARL4DP49703 201 aa16.35■□□□□ 0.21
PDLIM7-207ENST00000486828 NANOS3P60323 173 aaKnown RBP16.35■□□□□ 0.21
PDLIM7-207ENST00000486828 ZNF117Q03924 483 aa16.35■□□□□ 0.21
PDLIM7-207ENST00000486828 RPL18Q07020 188 aaKnown RBP16.35■□□□□ 0.21
PDLIM7-207ENST00000486828 EBPQ15125 230 aaKnown RBP16.35■□□□□ 0.21
PDLIM7-207ENST00000486828 NTRK2Q16620 822 aa16.35■□□□□ 0.21
PDLIM7-207ENST00000486828 YIF1BQ5BJH7 314 aa16.35■□□□□ 0.21
PDLIM7-207ENST00000486828 KRT74Q7RTS7 529 aa16.35■□□□□ 0.21
PDLIM7-207ENST00000486828 NANOGNBQ7Z5D8 188 aa16.35■□□□□ 0.21
PDLIM7-207ENST00000486828 KCTD20Q7Z5Y7 419 aa16.35■□□□□ 0.21
PDLIM7-207ENST00000486828 OR1L3Q8NH93 324 aa16.35■□□□□ 0.21
PDLIM7-207ENST00000486828 YIPF5Q969M3 257 aa16.35■□□□□ 0.21
PDLIM7-207ENST00000486828 RTN4RQ9BZR6 473 aa16.35■□□□□ 0.21
PDLIM7-207ENST00000486828 GRHPRQ9UBQ7 328 aa16.35■□□□□ 0.21
PDLIM7-207ENST00000486828 BOLA1Q9Y3E2 137 aa16.35■□□□□ 0.21
PDLIM7-207ENST00000486828 IGHV1OR21-1A0A087WYE8 117 aa16.34■□□□□ 0.21
PDLIM7-207ENST00000486828 PDCD5O14737 125 aa16.34■□□□□ 0.21
PDLIM7-207ENST00000486828 TPD52L2O43399 206 aaKnown RBP16.34■□□□□ 0.21
PDLIM7-207ENST00000486828 PIAS2O75928 621 aa16.34■□□□□ 0.21
PDLIM7-207ENST00000486828 TACSTD2P09758 323 aa16.34■□□□□ 0.21
PDLIM7-207ENST00000486828 IL12BP29460 328 aa16.34■□□□□ 0.21
PDLIM7-207ENST00000486828 SRP9P49458 86 aaKnown RBP16.34■□□□□ 0.21
PDLIM7-207ENST00000486828 EFNA3P52797 238 aa16.34■□□□□ 0.21
PDLIM7-207ENST00000486828 MESTQ5EB52 335 aa16.34■□□□□ 0.21
PDLIM7-207ENST00000486828 C9orf40Q8IXQ3 194 aa16.34■□□□□ 0.21
PDLIM7-207ENST00000486828 TIGD4Q8IY51 512 aa16.34■□□□□ 0.21
PDLIM7-207ENST00000486828 C7orf57Q8NEG2 295 aa16.34■□□□□ 0.21
PDLIM7-207ENST00000486828 AKAP1Q92667 903 aaKnown RBP eCLIP16.34■□□□□ 0.21
PDLIM7-207ENST00000486828 TSPAN32Q96QS1 320 aa16.34■□□□□ 0.21
PDLIM7-207ENST00000486828 GFM1Q96RP9 751 aaKnown RBP16.34■□□□□ 0.21
PDLIM7-207ENST00000486828 TMEM246Q9BRR3 403 aa16.34■□□□□ 0.21
PDLIM7-207ENST00000486828 FKRPQ9H9S5 495 aa16.34■□□□□ 0.21
PDLIM7-207ENST00000486828 PLSCR3Q9NRY6 295 aa16.34■□□□□ 0.21
PDLIM7-207ENST00000486828 ING3Q9NXR8 418 aa16.34■□□□□ 0.21
PDLIM7-207ENST00000486828 ZNF346Q9UL40 294 aaKnown RBP16.34■□□□□ 0.21
PDLIM7-207ENST00000486828 CAMK2AQ9UQM7 478 aa16.34■□□□□ 0.21
PDLIM7-207ENST00000486828 GON4LQ3T8J9 2241 aa16.34■□□□□ 0.21
PDLIM7-207ENST00000486828 COL5A1P20908 1838 aaPredicted RBP16.33■□□□□ 0.21
PDLIM7-207ENST00000486828 TMEM72A0PK05 275 aa16.33■□□□□ 0.21
PDLIM7-207ENST00000486828 ZFPL1O95159 310 aa16.33■□□□□ 0.21
PDLIM7-207ENST00000486828 FBLP22087 321 aaKnown RBP16.33■□□□□ 0.21
PDLIM7-207ENST00000486828 S100A1P23297 94 aa16.33■□□□□ 0.21
PDLIM7-207ENST00000486828 ERP29P30040 261 aaKnown RBP16.33■□□□□ 0.21
PDLIM7-207ENST00000486828 UBXN2BQ14CS0 331 aa16.33■□□□□ 0.21
PDLIM7-207ENST00000486828 CCDC92Q53HC0 331 aaPredicted RBP16.33■□□□□ 0.21
PDLIM7-207ENST00000486828 UBE2NLQ5JXB2 153 aa16.33■□□□□ 0.21
PDLIM7-207ENST00000486828 PRAMEF17Q5VTA0 474 aa16.33■□□□□ 0.21
PDLIM7-207ENST00000486828 FAM220AQ7Z4H9 259 aa16.33■□□□□ 0.21
PDLIM7-207ENST00000486828 CDC20BQ86Y33 519 aa16.33■□□□□ 0.21
PDLIM7-207ENST00000486828 C1orf216Q8TAB5 229 aa16.33■□□□□ 0.21
PDLIM7-207ENST00000486828 ZNF671Q8TAW3 534 aa16.33■□□□□ 0.21
PDLIM7-207ENST00000486828 LGALS14Q8TCE9 139 aa16.33■□□□□ 0.21
PDLIM7-207ENST00000486828 RGP1Q92546 391 aaPredicted RBP16.33■□□□□ 0.21
PDLIM7-207ENST00000486828 TAAR8Q969N4 342 aa16.33■□□□□ 0.21
PDLIM7-207ENST00000486828 ARPC5LQ9BPX5 153 aa16.33■□□□□ 0.21
PDLIM7-207ENST00000486828 NRSN2Q9GZP1 204 aa16.33■□□□□ 0.21
PDLIM7-207ENST00000486828 GALNT9Q9HCQ5 603 aa16.33■□□□□ 0.21
PDLIM7-207ENST00000486828 MCUBQ9NWR8 336 aa16.33■□□□□ 0.21
PDLIM7-207ENST00000486828 PCDHGA9Q9Y5G4 932 aaKnown RBP16.33■□□□□ 0.21
PDLIM7-207ENST00000486828 A0A1W2PQD3 144 aa16.33■□□□□ 0.2
PDLIM7-207ENST00000486828 ACOD1A6NK06 481 aa16.33■□□□□ 0.2
PDLIM7-207ENST00000486828 TO15178 435 aa16.33■□□□□ 0.2
PDLIM7-207ENST00000486828 CTDSPLO15194 276 aa16.33■□□□□ 0.2
PDLIM7-207ENST00000486828 HCRTR2O43614 444 aa16.33■□□□□ 0.2
PDLIM7-207ENST00000486828 TSPAN2O60636 221 aa16.33■□□□□ 0.2
PDLIM7-207ENST00000486828 HIST1H2ABP04908 130 aa16.33■□□□□ 0.2
PDLIM7-207ENST00000486828 CD3GP09693 182 aa16.33■□□□□ 0.2
PDLIM7-207ENST00000486828 RAB25P57735 213 aa16.33■□□□□ 0.2
PDLIM7-207ENST00000486828 DGCR2P98153 550 aa16.33■□□□□ 0.2
PDLIM7-207ENST00000486828 CFHR1Q03591 330 aa16.33■□□□□ 0.2
PDLIM7-207ENST00000486828 EFR3AQ14156 821 aa16.33■□□□□ 0.2
PDLIM7-207ENST00000486828 NUP210LQ5VU65 1888 aa16.33■□□□□ 0.2
PDLIM7-207ENST00000486828 HLA-DQA1Q5Y7H0 255 aa16.33■□□□□ 0.2
PDLIM7-207ENST00000486828 HIST3H2AQ7L7L0 130 aa16.33■□□□□ 0.2
PDLIM7-207ENST00000486828 PLXDC1Q8IUK5 500 aa16.33■□□□□ 0.2
PDLIM7-207ENST00000486828 D2HGDHQ8N465 521 aa16.33■□□□□ 0.2
PDLIM7-207ENST00000486828 TOMM5Q8N4H5 51 aa16.33■□□□□ 0.2
PDLIM7-207ENST00000486828 OR2T4Q8NH00 348 aa16.33■□□□□ 0.2
PDLIM7-207ENST00000486828 ADAMTS14Q8WXS8 1223 aa16.33■□□□□ 0.2
PDLIM7-207ENST00000486828 HIST1H2ACQ93077 130 aa16.33■□□□□ 0.2
PDLIM7-207ENST00000486828 ADAD1Q96M93 576 aaKnown RBP16.33■□□□□ 0.2
PDLIM7-207ENST00000486828 DERL3Q96Q80 235 aa16.33■□□□□ 0.2
PDLIM7-207ENST00000486828 GFI1Q99684 422 aa16.33■□□□□ 0.2
PDLIM7-207ENST00000486828 DPAGT1Q9H3H5 408 aa16.33■□□□□ 0.2
PDLIM7-207ENST00000486828 SLA2Q9H6Q3 261 aa16.33■□□□□ 0.2
PDLIM7-207ENST00000486828 NIPAL2Q9H841 368 aa16.33■□□□□ 0.2
PDLIM7-207ENST00000486828 ZNF304Q9HCX3 659 aa16.33■□□□□ 0.2
PDLIM7-207ENST00000486828 SRA1Q9HD15 236 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms