RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 LOXP28300 417 aaPredicted RBP16.02■□□□□ 0.16
COL1A1-207ENST00000486572 MPGP29372 298 aa16.02■□□□□ 0.16
COL1A1-207ENST00000486572 UGT2B15P54855 530 aa16.02■□□□□ 0.16
COL1A1-207ENST00000486572 FOXG1P55316 489 aaPredicted RBP16.02■□□□□ 0.16
COL1A1-207ENST00000486572 POU3F1Q03052 451 aaPredicted RBP16.02■□□□□ 0.16
COL1A1-207ENST00000486572 TGFBR3Q03167 851 aa16.02■□□□□ 0.16
COL1A1-207ENST00000486572 PPA1Q15181 289 aa16.02■□□□□ 0.16
COL1A1-207ENST00000486572 C9orf135Q5VTT2 229 aa16.02■□□□□ 0.16
COL1A1-207ENST00000486572 OR7E24Q6IFN5 339 aa16.02■□□□□ 0.16
COL1A1-207ENST00000486572 RBM15BQ8NDT2 890 aaKnown RBP16.02■□□□□ 0.16
COL1A1-207ENST00000486572 C1orf162Q8NEQ5 155 aaPredicted RBP16.02■□□□□ 0.16
COL1A1-207ENST00000486572 BCAS4Q8TDM0 211 aa16.02■□□□□ 0.16
COL1A1-207ENST00000486572 MUCL1Q96DR8 90 aa16.02■□□□□ 0.16
COL1A1-207ENST00000486572 ALKBH3Q96Q83 286 aaPredicted RBP16.02■□□□□ 0.16
COL1A1-207ENST00000486572 HS3ST6Q96QI5 342 aa16.02■□□□□ 0.16
COL1A1-207ENST00000486572 LIME1Q9H400 295 aa16.02■□□□□ 0.16
COL1A1-207ENST00000486572 GORASP2Q9H8Y8 452 aa16.02■□□□□ 0.16
COL1A1-207ENST00000486572 DCAF13Q9NV06 445 aaKnown RBP16.02■□□□□ 0.16
COL1A1-207ENST00000486572 EDARQ9UNE0 448 aa16.02■□□□□ 0.16
COL1A1-207ENST00000486572 B2RBV5 119 aa16.01■□□□□ 0.15
COL1A1-207ENST00000486572 ZNF587BE7ETH6 402 aa16.01■□□□□ 0.15
COL1A1-207ENST00000486572 SLC43A1O75387 559 aa16.01■□□□□ 0.15
COL1A1-207ENST00000486572 ZNF432O94892 652 aa16.01■□□□□ 0.15
COL1A1-207ENST00000486572 OR6A2O95222 327 aa16.01■□□□□ 0.15
COL1A1-207ENST00000486572 ASAH2BP0C7U1 165 aa16.01■□□□□ 0.15
COL1A1-207ENST00000486572 ADORA3P0DMS8 318 aa16.01■□□□□ 0.15
COL1A1-207ENST00000486572 UMPSP11172 480 aa16.01■□□□□ 0.15
COL1A1-207ENST00000486572 HLA-DOBP13765 273 aa16.01■□□□□ 0.15
COL1A1-207ENST00000486572 AHCYP23526 432 aa16.01■□□□□ 0.15
COL1A1-207ENST00000486572 YAP1P46937 504 aaKnown RBP16.01■□□□□ 0.15
COL1A1-207ENST00000486572 LGALS3BPQ08380 585 aa16.01■□□□□ 0.15
COL1A1-207ENST00000486572 FOXD4Q12950 439 aaPredicted RBP16.01■□□□□ 0.15
COL1A1-207ENST00000486572 GABRA6Q16445 453 aa16.01■□□□□ 0.15
COL1A1-207ENST00000486572 SEZ6L2Q6UXD5 910 aa16.01■□□□□ 0.15
COL1A1-207ENST00000486572 PAMR1Q6UXH9 720 aa16.01■□□□□ 0.15
COL1A1-207ENST00000486572 SLC46A3Q7Z3Q1 461 aa16.01■□□□□ 0.15
COL1A1-207ENST00000486572 PXKQ7Z7A4 578 aa16.01■□□□□ 0.15
COL1A1-207ENST00000486572 LRRC17Q8N6Y2 441 aa16.01■□□□□ 0.15
COL1A1-207ENST00000486572 PFN4Q8NHR9 129 aa16.01■□□□□ 0.15
COL1A1-207ENST00000486572 NINJ1Q92982 152 aa16.01■□□□□ 0.15
COL1A1-207ENST00000486572 PLPPR2Q96GM1 343 aa16.01■□□□□ 0.15
COL1A1-207ENST00000486572 MUS81Q96NY9 551 aa16.01■□□□□ 0.15
COL1A1-207ENST00000486572 FNDC11Q9BVV2 318 aa16.01■□□□□ 0.15
COL1A1-207ENST00000486572 LINC00470Q9BZP3 86 aa16.01■□□□□ 0.15
COL1A1-207ENST00000486572 ST6GALNAC2Q9UJ37 374 aa16.01■□□□□ 0.15
COL1A1-207ENST00000486572 MED31Q9Y3C7 131 aa16.01■□□□□ 0.15
COL1A1-207ENST00000486572 CREBBPQ92793 2442 aa16■□□□□ 0.15
COL1A1-207ENST00000486572 MYO9AB2RTY4 2548 aa16■□□□□ 0.15
COL1A1-207ENST00000486572 J3KTA2 159 aa16■□□□□ 0.15
COL1A1-207ENST00000486572 FFAR1O14842 300 aa16■□□□□ 0.15
COL1A1-207ENST00000486572 ARPC2O15144 300 aa16■□□□□ 0.15
COL1A1-207ENST00000486572 UPK3AO75631 287 aa16■□□□□ 0.15
COL1A1-207ENST00000486572 HIST1H2ABP04908 130 aa16■□□□□ 0.15
COL1A1-207ENST00000486572 TRAM2Q15035 370 aa16■□□□□ 0.15
COL1A1-207ENST00000486572 HIST3H2AQ7L7L0 130 aa16■□□□□ 0.15
COL1A1-207ENST00000486572 NANOGNBQ7Z5D8 188 aa16■□□□□ 0.15
COL1A1-207ENST00000486572 CYP4Z1Q86W10 505 aa16■□□□□ 0.15
COL1A1-207ENST00000486572 TMEM123Q8N131 208 aa16■□□□□ 0.15
COL1A1-207ENST00000486572 C17orf78Q8N4C9 275 aa16■□□□□ 0.15
COL1A1-207ENST00000486572 PIK3C3Q8NEB9 887 aa16■□□□□ 0.15
COL1A1-207ENST00000486572 HIST1H2ACQ93077 130 aa16■□□□□ 0.15
COL1A1-207ENST00000486572 SGTBQ96EQ0 304 aa16■□□□□ 0.15
COL1A1-207ENST00000486572 OR2M2Q96R28 347 aa16■□□□□ 0.15
COL1A1-207ENST00000486572 ESRP2Q9H6T0 727 aaKnown RBP16■□□□□ 0.15
COL1A1-207ENST00000486572 MAN2C1Q9NTJ4 1040 aa16■□□□□ 0.15
COL1A1-207ENST00000486572 C20orf141Q9NUB4 165 aa16■□□□□ 0.15
COL1A1-207ENST00000486572 RHCGQ9UBD6 479 aa16■□□□□ 0.15
COL1A1-207ENST00000486572 CCDC168Q8NDH2 2452 aa15.99■□□□□ 0.15
COL1A1-207ENST00000486572 C11orf98E9PRG8 122 aa15.99■□□□□ 0.15
COL1A1-207ENST00000486572 SERPINI2O75830 405 aa15.99■□□□□ 0.15
COL1A1-207ENST00000486572 OR7A10O76100 309 aa15.99■□□□□ 0.15
COL1A1-207ENST00000486572 PRSS23O95084 383 aa15.99■□□□□ 0.15
COL1A1-207ENST00000486572 HOXC12P31275 282 aa15.99■□□□□ 0.15
COL1A1-207ENST00000486572 MSX2P35548 267 aaPredicted RBP15.99■□□□□ 0.15
COL1A1-207ENST00000486572 ZP4Q12836 540 aa15.99■□□□□ 0.15
COL1A1-207ENST00000486572 GPR137CQ8N3F9 429 aa15.99■□□□□ 0.15
COL1A1-207ENST00000486572 FAM86B1Q8N7N1 296 aa15.99■□□□□ 0.15
COL1A1-207ENST00000486572 ANKK1Q8NFD2 765 aa15.99■□□□□ 0.15
COL1A1-207ENST00000486572 OR52N5Q8NH56 324 aa15.99■□□□□ 0.15
COL1A1-207ENST00000486572 NSMCE2Q96MF7 247 aa15.99■□□□□ 0.15
COL1A1-207ENST00000486572 MED29Q9NX70 200 aa15.99■□□□□ 0.15
COL1A1-207ENST00000486572 TAS2R5Q9NYW4 299 aa15.99■□□□□ 0.15
COL1A1-207ENST00000486572 ENPP4Q9Y6X5 453 aa15.99■□□□□ 0.15
COL1A1-207ENST00000486572 HTR3EA5X5Y0 456 aa15.98■□□□□ 0.15
COL1A1-207ENST00000486572 RNF13O43567 381 aa15.98■□□□□ 0.15
COL1A1-207ENST00000486572 PIP5K1CO60331 668 aa15.98■□□□□ 0.15
COL1A1-207ENST00000486572 RAF1P04049 648 aa15.98■□□□□ 0.15
COL1A1-207ENST00000486572 T-ENOLP0DO92 83 aa15.98■□□□□ 0.15
COL1A1-207ENST00000486572 CDH2P19022 906 aaPredicted RBP15.98■□□□□ 0.15
COL1A1-207ENST00000486572 FUT1P19526 365 aa15.98■□□□□ 0.15
COL1A1-207ENST00000486572 FUT4P22083 530 aa15.98■□□□□ 0.15
COL1A1-207ENST00000486572 ROR2Q01974 943 aaKnown RBP15.98■□□□□ 0.15
COL1A1-207ENST00000486572 NCMAPQ5T1S8 102 aa15.98■□□□□ 0.15
COL1A1-207ENST00000486572 HMBOX1Q6NT76 420 aa15.98■□□□□ 0.15
COL1A1-207ENST00000486572 NHLRC1Q6VVB1 395 aa15.98■□□□□ 0.15
COL1A1-207ENST00000486572 ZNF704Q6ZNC4 412 aaPredicted RBP15.98■□□□□ 0.15
COL1A1-207ENST00000486572 RINLQ6ZS11 566 aa15.98■□□□□ 0.15
COL1A1-207ENST00000486572 LINGO2Q7L985 606 aa15.98■□□□□ 0.15
COL1A1-207ENST00000486572 TRPM8Q7Z2W7 1104 aa15.98■□□□□ 0.15
COL1A1-207ENST00000486572 TSEN54Q7Z6J9 526 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms