RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 LGALS3BPQ08380 585 aa11□□□□□ -0.65
PTCD1-205ENST00000485746 ST3GAL3Q11203 375 aa11□□□□□ -0.65
PTCD1-205ENST00000485746 IFI44LQ53G44 452 aa11□□□□□ -0.65
PTCD1-205ENST00000485746 GKAP1Q5VSY0 366 aaPredicted RBP11□□□□□ -0.65
PTCD1-205ENST00000485746 GLYATQ6IB77 296 aa11□□□□□ -0.65
PTCD1-205ENST00000485746 C8orf82Q6P1X6 216 aaPredicted RBP11□□□□□ -0.65
PTCD1-205ENST00000485746 TMEM108Q6UXF1 575 aa11□□□□□ -0.65
PTCD1-205ENST00000485746 WDR88Q6ZMY6 472 aa11□□□□□ -0.65
PTCD1-205ENST00000485746 VTCN1Q7Z7D3 282 aa11□□□□□ -0.65
PTCD1-205ENST00000485746 DEPDC4Q8N2C3 294 aa11□□□□□ -0.65
PTCD1-205ENST00000485746 C17orf78Q8N4C9 275 aa11□□□□□ -0.65
PTCD1-205ENST00000485746 C1orf162Q8NEQ5 155 aaPredicted RBP11□□□□□ -0.65
PTCD1-205ENST00000485746 TMEM239Q8WW34 195 aa11□□□□□ -0.65
PTCD1-205ENST00000485746 GEMIN6Q8WXD5 167 aaKnown RBP11□□□□□ -0.65
PTCD1-205ENST00000485746 MBD6Q96DN6 1003 aa11□□□□□ -0.65
PTCD1-205ENST00000485746 SGTBQ96EQ0 304 aa11□□□□□ -0.65
PTCD1-205ENST00000485746 ALKBH3Q96Q83 286 aaPredicted RBP11□□□□□ -0.65
PTCD1-205ENST00000485746 LINC00470Q9BZP3 86 aa11□□□□□ -0.65
PTCD1-205ENST00000485746 FKRPQ9H9S5 495 aa11□□□□□ -0.65
PTCD1-205ENST00000485746 SLC17A5Q9NRA2 495 aa11□□□□□ -0.65
PTCD1-205ENST00000485746 BEX4Q9NWD9 120 aaPredicted RBP11□□□□□ -0.65
PTCD1-205ENST00000485746 B3GAT1Q9P2W7 334 aa11□□□□□ -0.65
PTCD1-205ENST00000485746 EGFL7Q9UHF1 273 aa11□□□□□ -0.65
PTCD1-205ENST00000485746 RPS6KA6Q9UK32 745 aa11□□□□□ -0.65
PTCD1-205ENST00000485746 MGAT4BQ9UQ53 548 aa11□□□□□ -0.65
PTCD1-205ENST00000485746 MED31Q9Y3C7 131 aa11□□□□□ -0.65
PTCD1-205ENST00000485746 SLC25A15Q9Y619 301 aa11□□□□□ -0.65
PTCD1-205ENST00000485746 ITPR2Q14571 2701 aa11□□□□□ -0.65
PTCD1-205ENST00000485746 LOC102725191A0A1B0GVB3 256 aa10.99□□□□□ -0.65
PTCD1-205ENST00000485746 DPRXA6NFQ7 191 aa10.99□□□□□ -0.65
PTCD1-205ENST00000485746 M0R3G1 203 aa10.99□□□□□ -0.65
PTCD1-205ENST00000485746 UPK3AO75631 287 aa10.99□□□□□ -0.65
PTCD1-205ENST00000485746 HPRP00739 348 aa10.99□□□□□ -0.65
PTCD1-205ENST00000485746 THRBP10828 461 aa10.99□□□□□ -0.65
PTCD1-205ENST00000485746 HLA-DOBP13765 273 aa10.99□□□□□ -0.65
PTCD1-205ENST00000485746 TCN1P20061 433 aaPredicted RBP10.99□□□□□ -0.65
PTCD1-205ENST00000485746 RBM34P42696 430 aaKnown RBP10.99□□□□□ -0.65
PTCD1-205ENST00000485746 MNAT1P51948 309 aa10.99□□□□□ -0.65
PTCD1-205ENST00000485746 ZNF74Q16587 644 aa10.99□□□□□ -0.65
PTCD1-205ENST00000485746 ADAM5Q6NVV9 412 aa10.99□□□□□ -0.65
PTCD1-205ENST00000485746 SLC22A25Q6T423 547 aa10.99□□□□□ -0.65
PTCD1-205ENST00000485746 C16orf89Q6UX73 402 aa10.99□□□□□ -0.65
PTCD1-205ENST00000485746 CBLL1Q75N03 491 aa10.99□□□□□ -0.65
PTCD1-205ENST00000485746 NANOGNBQ7Z5D8 188 aa10.99□□□□□ -0.65
PTCD1-205ENST00000485746 PXKQ7Z7A4 578 aa10.99□□□□□ -0.65
PTCD1-205ENST00000485746 CYP4Z1Q86W10 505 aa10.99□□□□□ -0.65
PTCD1-205ENST00000485746 NKAIN4Q8IVV8 208 aa10.99□□□□□ -0.65
PTCD1-205ENST00000485746 RNF148Q8N7C7 305 aa10.99□□□□□ -0.65
PTCD1-205ENST00000485746 CCDC197Q8NCU1 140 aa10.99□□□□□ -0.65
PTCD1-205ENST00000485746 OR6N1Q8NGY5 312 aa10.99□□□□□ -0.65
PTCD1-205ENST00000485746 TMEM255BQ8WV15 326 aa10.99□□□□□ -0.65
PTCD1-205ENST00000485746 TMEM171Q8WVE6 324 aa10.99□□□□□ -0.65
PTCD1-205ENST00000485746 RADILQ96JH8 1075 aa10.99□□□□□ -0.65
PTCD1-205ENST00000485746 PRRC1Q96M27 445 aa10.99□□□□□ -0.65
PTCD1-205ENST00000485746 ALPK1Q96QP1 1244 aa10.99□□□□□ -0.65
PTCD1-205ENST00000485746 KCNS3Q9BQ31 491 aa10.99□□□□□ -0.65
PTCD1-205ENST00000485746 EMC6Q9BV81 110 aa10.99□□□□□ -0.65
PTCD1-205ENST00000485746 ARL8BQ9NVJ2 186 aa10.99□□□□□ -0.65
PTCD1-205ENST00000485746 MED29Q9NX70 200 aa10.99□□□□□ -0.65
PTCD1-205ENST00000485746 NDE1Q9NXR1 346 aa10.99□□□□□ -0.65
PTCD1-205ENST00000485746 ZNF229Q9UJW7 825 aa10.99□□□□□ -0.65
PTCD1-205ENST00000485746 POFUT2Q9Y2G5 429 aa10.99□□□□□ -0.65
PTCD1-205ENST00000485746 FAM32AQ9Y421 112 aaKnown RBP10.99□□□□□ -0.65
PTCD1-205ENST00000485746 MAGED1Q9Y5V3 778 aaPredicted RBP10.99□□□□□ -0.65
PTCD1-205ENST00000485746 APCP25054 2843 aa10.99□□□□□ -0.65
PTCD1-205ENST00000485746 DCHS2Q6V1P9 2916 aa10.99□□□□□ -0.65
PTCD1-205ENST00000485746 NAV2Q8IVL1 2488 aa10.99□□□□□ -0.65
PTCD1-205ENST00000485746 MAST4O15021 2626 aa10.98□□□□□ -0.65
PTCD1-205ENST00000485746 A0A096LPE4 126 aa10.98□□□□□ -0.65
PTCD1-205ENST00000485746 A0A1W2PPZ6 126 aa10.98□□□□□ -0.65
PTCD1-205ENST00000485746 SLC35F4A4IF30 521 aa10.98□□□□□ -0.65
PTCD1-205ENST00000485746 PDLIM1O00151 329 aa10.98□□□□□ -0.65
PTCD1-205ENST00000485746 ABCD4O14678 606 aa10.98□□□□□ -0.65
PTCD1-205ENST00000485746 ARHGEF9O43307 516 aa10.98□□□□□ -0.65
PTCD1-205ENST00000485746 TRAF3IP2O43734 574 aaPredicted RBP10.98□□□□□ -0.65
PTCD1-205ENST00000485746 FZD7O75084 574 aa10.98□□□□□ -0.65
PTCD1-205ENST00000485746 OR7A10O76100 309 aa10.98□□□□□ -0.65
PTCD1-205ENST00000485746 MT-ND1P03886 318 aa10.98□□□□□ -0.65
PTCD1-205ENST00000485746 IFNGR1P15260 489 aa10.98□□□□□ -0.65
PTCD1-205ENST00000485746 FUT1P19526 365 aa10.98□□□□□ -0.65
PTCD1-205ENST00000485746 PTAFRP25105 342 aa10.98□□□□□ -0.65
PTCD1-205ENST00000485746 CAPZA2P47755 286 aa10.98□□□□□ -0.65
PTCD1-205ENST00000485746 UGT2B15P54855 530 aa10.98□□□□□ -0.65
PTCD1-205ENST00000485746 CDH11P55287 796 aa10.98□□□□□ -0.65
PTCD1-205ENST00000485746 SH3BGRP55822 239 aaPredicted RBP10.98□□□□□ -0.65
PTCD1-205ENST00000485746 BIDP55957 195 aa10.98□□□□□ -0.65
PTCD1-205ENST00000485746 SLC25A3Q00325 362 aa10.98□□□□□ -0.65
PTCD1-205ENST00000485746 CAMK2DQ13557 499 aa10.98□□□□□ -0.65
PTCD1-205ENST00000485746 HIKESHIQ53FT3 197 aa10.98□□□□□ -0.65
PTCD1-205ENST00000485746 SAMD4BQ5PRF9 694 aaKnown RBP10.98□□□□□ -0.65
PTCD1-205ENST00000485746 RRM2BQ7LG56 351 aa10.98□□□□□ -0.65
PTCD1-205ENST00000485746 TSPYL5Q86VY4 417 aaPredicted RBP10.98□□□□□ -0.65
PTCD1-205ENST00000485746 PGAM4Q8N0Y7 254 aa10.98□□□□□ -0.65
PTCD1-205ENST00000485746 LRRC17Q8N6Y2 441 aa10.98□□□□□ -0.65
PTCD1-205ENST00000485746 ANKS4BQ8N8V4 417 aa10.98□□□□□ -0.65
PTCD1-205ENST00000485746 WDR31Q8NA23 367 aa10.98□□□□□ -0.65
PTCD1-205ENST00000485746 ANKK1Q8NFD2 765 aa10.98□□□□□ -0.65
PTCD1-205ENST00000485746 KBTBD8Q8NFY9 601 aa10.98□□□□□ -0.65
PTCD1-205ENST00000485746 OR1K1Q8NGR3 316 aa10.98□□□□□ -0.65
PTCD1-205ENST00000485746 PFN4Q8NHR9 129 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms