RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 EMC6Q9BV81 110 aa14.28□□□□□ -0.12
DDR1-246ENST00000485023 NANSQ9NR45 359 aa14.28□□□□□ -0.12
DDR1-246ENST00000485023 CCM2LQ9NUG4 571 aaPredicted RBP14.28□□□□□ -0.12
DDR1-246ENST00000485023 MED29Q9NX70 200 aa14.28□□□□□ -0.12
DDR1-246ENST00000485023 FREM1Q5H8C1 2179 aa14.27□□□□□ -0.12
DDR1-246ENST00000485023 B2RBV5 119 aa14.27□□□□□ -0.13
DDR1-246ENST00000485023 ZNF587BE7ETH6 402 aa14.27□□□□□ -0.13
DDR1-246ENST00000485023 PDLIM1O00151 329 aa14.27□□□□□ -0.13
DDR1-246ENST00000485023 PLPP3O14495 311 aa14.27□□□□□ -0.13
DDR1-246ENST00000485023 CLOCKO15516 846 aa14.27□□□□□ -0.13
DDR1-246ENST00000485023 SLC43A1O75387 559 aa14.27□□□□□ -0.13
DDR1-246ENST00000485023 IST1P53990 364 aa14.27□□□□□ -0.13
DDR1-246ENST00000485023 LSM11P83369 360 aaKnown RBP eCLIP14.27□□□□□ -0.13
DDR1-246ENST00000485023 KRT72Q14CN4 511 aa14.27□□□□□ -0.13
DDR1-246ENST00000485023 GABRA6Q16445 453 aa14.27□□□□□ -0.13
DDR1-246ENST00000485023 SAMD4BQ5PRF9 694 aaKnown RBP14.27□□□□□ -0.13
DDR1-246ENST00000485023 TIMM23BQ5SRD1 257 aa14.27□□□□□ -0.13
DDR1-246ENST00000485023 SEZ6L2Q6UXD5 910 aa14.27□□□□□ -0.13
DDR1-246ENST00000485023 ZNF704Q6ZNC4 412 aaPredicted RBP14.27□□□□□ -0.13
DDR1-246ENST00000485023 LINGO2Q7L985 606 aa14.27□□□□□ -0.13
DDR1-246ENST00000485023 SLC46A3Q7Z3Q1 461 aa14.27□□□□□ -0.13
DDR1-246ENST00000485023 NANOGNBQ7Z5D8 188 aa14.27□□□□□ -0.13
DDR1-246ENST00000485023 MEX3DQ86XN8 651 aaKnown RBP14.27□□□□□ -0.13
DDR1-246ENST00000485023 POMGNT2Q8NAT1 580 aa14.27□□□□□ -0.13
DDR1-246ENST00000485023 MUCL1Q96DR8 90 aa14.27□□□□□ -0.13
DDR1-246ENST00000485023 TXNDC15Q96J42 360 aa14.27□□□□□ -0.13
DDR1-246ENST00000485023 C1QTNF6Q9BXI9 259 aa14.27□□□□□ -0.13
DDR1-246ENST00000485023 SLC19A3Q9BZV2 496 aa14.27□□□□□ -0.13
DDR1-246ENST00000485023 POLR2J2Q9GZM3 115 aaKnown RBP14.27□□□□□ -0.13
DDR1-246ENST00000485023 POLR2J3Q9H1A7 115 aaKnown RBP14.27□□□□□ -0.13
DDR1-246ENST00000485023 FKRPQ9H9S5 495 aa14.27□□□□□ -0.13
DDR1-246ENST00000485023 C20orf141Q9NUB4 165 aa14.27□□□□□ -0.13
DDR1-246ENST00000485023 NPAP1Q9NZP6 1156 aa14.27□□□□□ -0.13
DDR1-246ENST00000485023 RCE1Q9Y256 329 aa14.27□□□□□ -0.13
DDR1-246ENST00000485023 AKAP8O43823 692 aaKnown RBP14.26□□□□□ -0.13
DDR1-246ENST00000485023 MT-ND1P03886 318 aa14.26□□□□□ -0.13
DDR1-246ENST00000485023 DNASE1P24855 282 aa14.26□□□□□ -0.13
DDR1-246ENST00000485023 MPGP29372 298 aa14.26□□□□□ -0.13
DDR1-246ENST00000485023 IFNA8P32881 189 aa14.26□□□□□ -0.13
DDR1-246ENST00000485023 RBM34P42696 430 aaKnown RBP14.26□□□□□ -0.13
DDR1-246ENST00000485023 ZNF83P51522 516 aa14.26□□□□□ -0.13
DDR1-246ENST00000485023 NR1H2P55055 460 aa14.26□□□□□ -0.13
DDR1-246ENST00000485023 ST3GAL3Q11203 375 aa14.26□□□□□ -0.13
DDR1-246ENST00000485023 KEAP1Q14145 624 aa14.26□□□□□ -0.13
DDR1-246ENST00000485023 HIKESHIQ53FT3 197 aa14.26□□□□□ -0.13
DDR1-246ENST00000485023 WDFY1Q8IWB7 410 aa14.26□□□□□ -0.13
DDR1-246ENST00000485023 GPR137CQ8N3F9 429 aa14.26□□□□□ -0.13
DDR1-246ENST00000485023 BCAS4Q8TDM0 211 aa14.26□□□□□ -0.13
DDR1-246ENST00000485023 SGTBQ96EQ0 304 aa14.26□□□□□ -0.13
DDR1-246ENST00000485023 NSL1Q96IY1 281 aa14.26□□□□□ -0.13
DDR1-246ENST00000485023 OR2M2Q96R28 347 aa14.26□□□□□ -0.13
DDR1-246ENST00000485023 FNDC11Q9BVV2 318 aa14.26□□□□□ -0.13
DDR1-246ENST00000485023 NGBQ9NPG2 151 aa14.26□□□□□ -0.13
DDR1-246ENST00000485023 NDE1Q9NXR1 346 aa14.26□□□□□ -0.13
DDR1-246ENST00000485023 ZNF229Q9UJW7 825 aa14.26□□□□□ -0.13
DDR1-246ENST00000485023 RPS6KA6Q9UK32 745 aa14.26□□□□□ -0.13
DDR1-246ENST00000485023 MED31Q9Y3C7 131 aa14.26□□□□□ -0.13
DDR1-246ENST00000485023 BLOC1S5-TXNDC5H3BN57 136 aa14.25□□□□□ -0.13
DDR1-246ENST00000485023 hCG_2039718K7EN88 272 aa14.25□□□□□ -0.13
DDR1-246ENST00000485023 M0R3G1 203 aa14.25□□□□□ -0.13
DDR1-246ENST00000485023 FFAR1O14842 300 aa14.25□□□□□ -0.13
DDR1-246ENST00000485023 ARPC2O15144 300 aa14.25□□□□□ -0.13
DDR1-246ENST00000485023 RNF13O43567 381 aa14.25□□□□□ -0.13
DDR1-246ENST00000485023 SEC14L2O76054 403 aa14.25□□□□□ -0.13
DDR1-246ENST00000485023 ZNF432O94892 652 aa14.25□□□□□ -0.13
DDR1-246ENST00000485023 RAF1P04049 648 aa14.25□□□□□ -0.13
DDR1-246ENST00000485023 HIST1H2ABP04908 130 aa14.25□□□□□ -0.13
DDR1-246ENST00000485023 THRBP10828 461 aa14.25□□□□□ -0.13
DDR1-246ENST00000485023 HSD17B1P14061 328 aa14.25□□□□□ -0.13
DDR1-246ENST00000485023 IFNGR1P15260 489 aa14.25□□□□□ -0.13
DDR1-246ENST00000485023 FUT1P19526 365 aa14.25□□□□□ -0.13
DDR1-246ENST00000485023 HOXC12P31275 282 aa14.25□□□□□ -0.13
DDR1-246ENST00000485023 ART1P52961 327 aa14.25□□□□□ -0.13
DDR1-246ENST00000485023 ROR2Q01974 943 aaKnown RBP14.25□□□□□ -0.13
DDR1-246ENST00000485023 BSPH1Q075Z2 132 aa14.25□□□□□ -0.13
DDR1-246ENST00000485023 MELKQ14680 651 aa14.25□□□□□ -0.13
DDR1-246ENST00000485023 PHYHD1Q5SRE7 291 aa14.25□□□□□ -0.13
DDR1-246ENST00000485023 HMBOX1Q6NT76 420 aa14.25□□□□□ -0.13
DDR1-246ENST00000485023 ADAM5Q6NVV9 412 aa14.25□□□□□ -0.13
DDR1-246ENST00000485023 RINLQ6ZS11 566 aa14.25□□□□□ -0.13
DDR1-246ENST00000485023 HIST3H2AQ7L7L0 130 aa14.25□□□□□ -0.13
DDR1-246ENST00000485023 ABHD12BQ7Z5M8 362 aaPredicted RBP14.25□□□□□ -0.13
DDR1-246ENST00000485023 OFCC1Q8IZS5 231 aa14.25□□□□□ -0.13
DDR1-246ENST00000485023 TMEM123Q8N131 208 aa14.25□□□□□ -0.13
DDR1-246ENST00000485023 KBTBD8Q8NFY9 601 aa14.25□□□□□ -0.13
DDR1-246ENST00000485023 HIST1H2ACQ93077 130 aa14.25□□□□□ -0.13
DDR1-246ENST00000485023 USB1Q9BQ65 265 aaKnown RBP14.25□□□□□ -0.13
DDR1-246ENST00000485023 ESRP2Q9H6T0 727 aaKnown RBP14.25□□□□□ -0.13
DDR1-246ENST00000485023 MAN2C1Q9NTJ4 1040 aa14.25□□□□□ -0.13
DDR1-246ENST00000485023 MAGEL2Q9UJ55 1249 aa14.25□□□□□ -0.13
DDR1-246ENST00000485023 SAMD4AQ9UPU9 718 aaKnown RBP14.25□□□□□ -0.13
DDR1-246ENST00000485023 RNF115Q9Y4L5 304 aa14.25□□□□□ -0.13
DDR1-246ENST00000485023 NOX1Q9Y5S8 564 aa14.25□□□□□ -0.13
DDR1-246ENST00000485023 A0A096LPE4 126 aa14.24□□□□□ -0.13
DDR1-246ENST00000485023 LOC102725191A0A1B0GVB3 256 aa14.24□□□□□ -0.13
DDR1-246ENST00000485023 A0A1W2PPZ6 126 aa14.24□□□□□ -0.13
DDR1-246ENST00000485023 SLC35F4A4IF30 521 aa14.24□□□□□ -0.13
DDR1-246ENST00000485023 ZNF726A6NNF4 738 aa14.24□□□□□ -0.13
DDR1-246ENST00000485023 M0R1B8 84 aa14.24□□□□□ -0.13
DDR1-246ENST00000485023 OR7A10O76100 309 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms