RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 MVDP53602 400 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 SH3BGRP55822 239 aaPredicted RBP5.43□□□□□ -1.54
PTCD3-215ENST00000484203 NCALDP61601 193 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 RBBP4Q09028 425 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 SQLEQ14534 574 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 SLC17A1Q14916 467 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 STK11Q15831 433 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 NRF1Q16656 503 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 VMACQ2NL98 169 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 ZNF672Q499Z4 452 aaPredicted RBP5.43□□□□□ -1.54
PTCD3-215ENST00000484203 ZNF311Q5JNZ3 666 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 LRIF1Q5T3J3 769 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 GCNT6Q5T4J0 391 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 AGAP6Q5VW22 663 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 TMEM225Q6GV28 225 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 CASP12Q6UXS9 341 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 YTHDF3Q7Z739 585 aaKnown RBP5.43□□□□□ -1.54
PTCD3-215ENST00000484203 SNX32Q86XE0 403 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 C1QL4Q86Z23 238 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 CCDC36Q8IYA8 594 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 CADM2Q8N3J6 435 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 ZNF433Q8N7K0 673 aaPredicted RBP5.43□□□□□ -1.54
PTCD3-215ENST00000484203 LSMEM1Q8N8F7 131 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 WFDC11Q8NEX6 87 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 OR6S1Q8NH40 331 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 MFSD8Q8NHS3 518 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 PNPT1Q8TCS8 783 aaKnown RBP5.43□□□□□ -1.54
PTCD3-215ENST00000484203 SMAP2Q8WU79 429 aaPredicted RBP5.43□□□□□ -1.54
PTCD3-215ENST00000484203 RASSF5Q8WWW0 418 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 AKAP1Q92667 903 aaKnown RBP eCLIP5.43□□□□□ -1.54
PTCD3-215ENST00000484203 VPS33AQ96AX1 596 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 SPDL1Q96EA4 605 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 TMEM19Q96HH6 336 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 BOD1Q96IK1 185 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 ARL5BQ96KC2 179 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 CLUHP3Q96NS8 147 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 MUS81Q96NY9 551 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 OR52B2Q96RD2 323 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 EPYCQ99645 322 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 SH3GL1Q99961 368 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 TRIM2Q9C040 744 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 TMEM38AQ9H6F2 299 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 FKRPQ9H9S5 495 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 ING1Q9UK53 422 aaPredicted RBP5.43□□□□□ -1.54
PTCD3-215ENST00000484203 ZNF443Q9Y2A4 671 aaPredicted RBP5.43□□□□□ -1.54
PTCD3-215ENST00000484203 AMDHD2Q9Y303 409 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 CSPG4Q6UVK1 2322 aa5.43□□□□□ -1.54
PTCD3-215ENST00000484203 NSD1Q96L73 2696 aaPredicted RBP5.43□□□□□ -1.54
PTCD3-215ENST00000484203 HRNRQ86YZ3 2850 aaPredicted RBP5.42□□□□□ -1.54
PTCD3-215ENST00000484203 IGHV3-15A0A0B4J1V0 119 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 LOC102725191A0A1B0GVB3 256 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 A0A1W2PPR1 153 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 TMEM72A0PK05 275 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 CLDN24A6NM45 220 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 C9JVG2 144 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 ANGPT2O15123 496 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 FMO6PO60774 539 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 LYZL6O75951 148 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 GPX2P18283 190 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 IGHV1-2P23083 117 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 ACAA2P42765 397 aaKnown RBP5.42□□□□□ -1.54
PTCD3-215ENST00000484203 PTH2RP49190 550 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 AQP5P55064 265 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 ATP5J2P56134 94 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 DSCR9P59020 149 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 PRPS1P60891 318 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 CDK6Q00534 326 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 BSPH1Q075Z2 132 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 CR1LQ2VPA4 569 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 OTUD3Q5T2D3 398 aaPredicted RBP5.42□□□□□ -1.54
PTCD3-215ENST00000484203 INTS11Q5TA45 600 aaKnown RBP5.42□□□□□ -1.54
PTCD3-215ENST00000484203 C1orf140Q5VVS0 124 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 FAM91A1Q658Y4 838 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 ZNF544Q6NX49 715 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 ULK3Q6PHR2 472 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 DHRS4L2Q6PKH6 230 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 TEPPQ6URK8 271 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 C6orf89Q6UWU4 347 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 CLEC9AQ6UXN8 241 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 ZNF836Q6ZNA1 936 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 AAED1Q7RTV5 226 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 MAVSQ7Z434 540 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 RANBP3LQ86VV4 465 aaPredicted RBP5.42□□□□□ -1.54
PTCD3-215ENST00000484203 JAZF1Q86VZ6 243 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 HIPK4Q8NE63 616 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 IGFBPL1Q8WX77 278 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 SLC38A4Q969I6 547 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 SLC47A1Q96FL8 570 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 PERPQ96FX8 193 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 MAGEB18Q96M61 343 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 ADAD1Q96M93 576 aaKnown RBP5.42□□□□□ -1.54
PTCD3-215ENST00000484203 ZNF300Q96RE9 604 aaPredicted RBP5.42□□□□□ -1.54
PTCD3-215ENST00000484203 KCNS3Q9BQ31 491 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 KLHDC3Q9BQ90 382 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 SYT3Q9BQG1 590 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 AMBRA1Q9C0C7 1298 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 OR11A1Q9GZK7 315 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 PAIP1Q9H074 479 aaKnown RBP5.42□□□□□ -1.54
PTCD3-215ENST00000484203 SLCO5A1Q9H2Y9 848 aa5.42□□□□□ -1.54
PTCD3-215ENST00000484203 TMEM27Q9HBJ8 222 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms