RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 ERVK13-1Q9NX77 482 aa23.69■■□□□ 1.38
SHOX2-204ENST00000483851 TEKT2Q9UIF3 430 aa23.69■■□□□ 1.38
SHOX2-204ENST00000483851 TAF4O00268 1085 aa23.68■■□□□ 1.38
SHOX2-204ENST00000483851 GRPRP30550 384 aa23.68■■□□□ 1.38
SHOX2-204ENST00000483851 GGTLC2Q14390 218 aa23.68■■□□□ 1.38
SHOX2-204ENST00000483851 PAQR6Q6TCH4 344 aa23.68■■□□□ 1.38
SHOX2-204ENST00000483851 JAZF1Q86VZ6 243 aa23.68■■□□□ 1.38
SHOX2-204ENST00000483851 IL22RA1Q8N6P7 574 aa23.68■■□□□ 1.38
SHOX2-204ENST00000483851 SIRT6Q8N6T7 355 aa23.68■■□□□ 1.38
SHOX2-204ENST00000483851 POMGNT2Q8NAT1 580 aa23.68■■□□□ 1.38
SHOX2-204ENST00000483851 POC1BQ8TC44 478 aa23.68■■□□□ 1.38
SHOX2-204ENST00000483851 PSMF1Q92530 271 aa23.68■■□□□ 1.38
SHOX2-204ENST00000483851 SLC25A36Q96CQ1 311 aa23.68■■□□□ 1.38
SHOX2-204ENST00000483851 Q96M85 177 aa23.68■■□□□ 1.38
SHOX2-204ENST00000483851 SNX18Q96RF0 628 aa23.68■■□□□ 1.38
SHOX2-204ENST00000483851 ZNF649Q9BS31 505 aa23.68■■□□□ 1.38
SHOX2-204ENST00000483851 OR11A1Q9GZK7 315 aa23.68■■□□□ 1.38
SHOX2-204ENST00000483851 PROK2Q9HC23 129 aa23.68■■□□□ 1.38
SHOX2-204ENST00000483851 FBXL2Q9UKC9 423 aa23.68■■□□□ 1.38
SHOX2-204ENST00000483851 CPAMD8Q8IZJ3 1885 aa23.68■■□□□ 1.38
SHOX2-204ENST00000483851 TEX13CA0A0J9YWL9 993 aa23.68■■□□□ 1.38
SHOX2-204ENST00000483851 CDK2AP1O14519 115 aa23.68■■□□□ 1.38
SHOX2-204ENST00000483851 APOL3O95236 402 aa23.68■■□□□ 1.38
SHOX2-204ENST00000483851 SBK2P0C263 348 aa23.68■■□□□ 1.38
SHOX2-204ENST00000483851 ACTC1P68032 377 aa23.68■■□□□ 1.38
SHOX2-204ENST00000483851 ACTA1P68133 377 aa23.68■■□□□ 1.38
SHOX2-204ENST00000483851 ACSM1Q08AH1 577 aa23.68■■□□□ 1.38
SHOX2-204ENST00000483851 ZP4Q12836 540 aa23.68■■□□□ 1.38
SHOX2-204ENST00000483851 C3orf33Q6P1S2 294 aa23.68■■□□□ 1.38
SHOX2-204ENST00000483851 KLHL36Q8N4N3 616 aa23.68■■□□□ 1.38
SHOX2-204ENST00000483851 OR9Q1Q8NGQ5 310 aa23.68■■□□□ 1.38
SHOX2-204ENST00000483851 NMNAT3Q96T66 252 aa23.68■■□□□ 1.38
SHOX2-204ENST00000483851 INIPQ9NRY2 104 aa23.68■■□□□ 1.38
SHOX2-204ENST00000483851 NDUFB11Q9NX14 153 aa23.68■■□□□ 1.38
SHOX2-204ENST00000483851 CAB39Q9Y376 341 aaPredicted RBP23.68■■□□□ 1.38
SHOX2-204ENST00000483851 PCSK5Q92824 1860 aa23.67■■□□□ 1.38
SHOX2-204ENST00000483851 TM4SF5O14894 197 aa23.67■■□□□ 1.38
SHOX2-204ENST00000483851 OR6A2O95222 327 aa23.67■■□□□ 1.38
SHOX2-204ENST00000483851 CRYBB2P43320 205 aa23.67■■□□□ 1.38
SHOX2-204ENST00000483851 RPS3AP61247 264 aaKnown RBP23.67■■□□□ 1.38
SHOX2-204ENST00000483851 PON3Q15166 354 aa23.67■■□□□ 1.38
SHOX2-204ENST00000483851 SHFQ7M4L6 423 aa23.67■■□□□ 1.38
SHOX2-204ENST00000483851 ZNF485Q8NCK3 441 aa23.67■■□□□ 1.38
SHOX2-204ENST00000483851 LSM14AQ8ND56 463 aaKnown RBP23.67■■□□□ 1.38
SHOX2-204ENST00000483851 KIAA1143Q96AT1 154 aaPredicted RBP23.67■■□□□ 1.38
SHOX2-204ENST00000483851 RASD2Q96D21 266 aa23.67■■□□□ 1.38
SHOX2-204ENST00000483851 ARHGAP9Q9BRR9 750 aa23.67■■□□□ 1.38
SHOX2-204ENST00000483851 SACM1LQ9NTJ5 587 aa23.67■■□□□ 1.38
SHOX2-204ENST00000483851 RHBDL2Q9NX52 303 aa23.67■■□□□ 1.38
SHOX2-204ENST00000483851 MOKQ9UQ07 419 aa23.67■■□□□ 1.38
SHOX2-204ENST00000483851 PCDHGB7Q9Y5F8 929 aa23.67■■□□□ 1.38
SHOX2-204ENST00000483851 AHCTF1Q8WYP5 2266 aa23.67■■□□□ 1.38
SHOX2-204ENST00000483851 PLPP3O14495 311 aa23.66■■□□□ 1.38
SHOX2-204ENST00000483851 IGHMP01871 453 aa23.66■■□□□ 1.38
SHOX2-204ENST00000483851 F13BP05160 661 aa23.66■■□□□ 1.38
SHOX2-204ENST00000483851 CAPZA2P47755 286 aa23.66■■□□□ 1.38
SHOX2-204ENST00000483851 PSMD7P51665 324 aa23.66■■□□□ 1.38
SHOX2-204ENST00000483851 SLC16A1P53985 500 aa23.66■■□□□ 1.38
SHOX2-204ENST00000483851 DSCR4P56555 118 aaPredicted RBP23.66■■□□□ 1.38
SHOX2-204ENST00000483851 DCAF10Q5QP82 559 aa23.66■■□□□ 1.38
SHOX2-204ENST00000483851 SLC6A19Q695T7 634 aa23.66■■□□□ 1.38
SHOX2-204ENST00000483851 OR1J4Q8NGS1 313 aa23.66■■□□□ 1.38
SHOX2-204ENST00000483851 THOC3Q96J01 351 aaKnown RBP23.66■■□□□ 1.38
SHOX2-204ENST00000483851 FER1L6-AS2Q96M78 137 aa23.66■■□□□ 1.38
SHOX2-204ENST00000483851 NPAS1Q99742 590 aa23.66■■□□□ 1.38
SHOX2-204ENST00000483851 ADGRL4Q9HBW9 690 aa23.66■■□□□ 1.38
SHOX2-204ENST00000483851 SEC14L4Q9UDX3 406 aa23.66■■□□□ 1.38
SHOX2-204ENST00000483851 OR6C68A6NDL8 312 aa23.66■■□□□ 1.38
SHOX2-204ENST00000483851 MASP2O00187 686 aa23.66■■□□□ 1.38
SHOX2-204ENST00000483851 P04436 131 aa23.66■■□□□ 1.38
SHOX2-204ENST00000483851 LIFP15018 202 aa23.66■■□□□ 1.38
SHOX2-204ENST00000483851 CPEP16870 476 aa23.66■■□□□ 1.38
SHOX2-204ENST00000483851 AIMP2Q13155 320 aaKnown RBP23.66■■□□□ 1.38
SHOX2-204ENST00000483851 SELENBP1Q13228 472 aa23.66■■□□□ 1.38
SHOX2-204ENST00000483851 INPP5JQ15735 1006 aaPredicted RBP23.66■■□□□ 1.38
SHOX2-204ENST00000483851 TIGD3Q6B0B8 471 aa23.66■■□□□ 1.38
SHOX2-204ENST00000483851 TMPRSS11AQ6ZMR5 421 aa23.66■■□□□ 1.38
SHOX2-204ENST00000483851 ZNF554Q86TJ5 538 aa23.66■■□□□ 1.38
SHOX2-204ENST00000483851 SNX29P2Q8IUI4 249 aa23.66■■□□□ 1.38
SHOX2-204ENST00000483851 NPIPB13A6NJU9 1138 aa23.65■■□□□ 1.38
SHOX2-204ENST00000483851 NPIPB4C9JG80 1138 aa23.65■■□□□ 1.38
SHOX2-204ENST00000483851 CBR3O75828 277 aa23.65■■□□□ 1.38
SHOX2-204ENST00000483851 GTF2E2P29084 291 aaKnown RBP23.65■■□□□ 1.38
SHOX2-204ENST00000483851 DIO1P49895 249 aa23.65■■□□□ 1.38
SHOX2-204ENST00000483851 KRR1Q13601 381 aaKnown RBP23.65■■□□□ 1.38
SHOX2-204ENST00000483851 LEG1Q6P5S2 330 aa23.65■■□□□ 1.38
SHOX2-204ENST00000483851 LHFPL3Q86UP9 236 aa23.65■■□□□ 1.38
SHOX2-204ENST00000483851 GTPBP8Q8N3Z3 284 aaPredicted RBP23.65■■□□□ 1.38
SHOX2-204ENST00000483851 MINDY2Q8NBR6 621 aa23.65■■□□□ 1.38
SHOX2-204ENST00000483851 ADAMTS14Q8WXS8 1223 aa23.65■■□□□ 1.38
SHOX2-204ENST00000483851 TSPAN32Q96QS1 320 aa23.65■■□□□ 1.38
SHOX2-204ENST00000483851 TXNIPQ9H3M7 391 aa23.65■■□□□ 1.38
SHOX2-204ENST00000483851 SIAEQ9HAT2 523 aa23.65■■□□□ 1.38
SHOX2-204ENST00000483851 FANCFQ9NPI8 374 aa23.65■■□□□ 1.38
SHOX2-204ENST00000483851 ALKBH4Q9NXW9 302 aa23.65■■□□□ 1.38
SHOX2-204ENST00000483851 MRPS18BQ9Y676 258 aaKnown RBP23.65■■□□□ 1.38
SHOX2-204ENST00000483851 FUOMA2VDF0 154 aa23.64■■□□□ 1.38
SHOX2-204ENST00000483851 C12orf71A8MTZ7 269 aa23.64■■□□□ 1.38
SHOX2-204ENST00000483851 RNF13O43567 381 aa23.64■■□□□ 1.38
SHOX2-204ENST00000483851 TRIM3O75382 744 aaPredicted RBP23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms