RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 RSPH9Q9H1X1 276 aaPredicted RBP10.82□□□□□ -0.68
VTI1A-205ENST00000483122 TSPAN10Q9H1Z9 355 aaPredicted RBP10.82□□□□□ -0.68
VTI1A-205ENST00000483122 ACKR4Q9NPB9 350 aa10.82□□□□□ -0.68
VTI1A-205ENST00000483122 PRMT8Q9NR22 394 aaPredicted RBP10.82□□□□□ -0.68
VTI1A-205ENST00000483122 HAO2Q9NYQ3 351 aa10.82□□□□□ -0.68
VTI1A-205ENST00000483122 NCDNQ9UBB6 729 aa10.82□□□□□ -0.68
VTI1A-205ENST00000483122 SIGLEC7Q9Y286 467 aa10.82□□□□□ -0.68
VTI1A-205ENST00000483122 MYOFQ9NZM1 2061 aa10.81□□□□□ -0.68
VTI1A-205ENST00000483122 A0A0A6YYD5 115 aa10.81□□□□□ -0.68
VTI1A-205ENST00000483122 SULT2B1O00204 365 aa10.81□□□□□ -0.68
VTI1A-205ENST00000483122 RCBTB2O95199 551 aa10.81□□□□□ -0.68
VTI1A-205ENST00000483122 FARS2O95363 451 aaKnown RBP10.81□□□□□ -0.68
VTI1A-205ENST00000483122 CD3DP04234 171 aa10.81□□□□□ -0.68
VTI1A-205ENST00000483122 CALCBP10092 127 aa10.81□□□□□ -0.68
VTI1A-205ENST00000483122 ZNF3P17036 446 aa10.81□□□□□ -0.68
VTI1A-205ENST00000483122 NDUFS1P28331 727 aa10.81□□□□□ -0.68
VTI1A-205ENST00000483122 CASRP41180 1078 aa10.81□□□□□ -0.68
VTI1A-205ENST00000483122 SSR2P43308 183 aa10.81□□□□□ -0.68
VTI1A-205ENST00000483122 PPT1P50897 306 aa10.81□□□□□ -0.68
VTI1A-205ENST00000483122 ATP1B3P54709 279 aa10.81□□□□□ -0.68
VTI1A-205ENST00000483122 NANOS3P60323 173 aaKnown RBP10.81□□□□□ -0.68
VTI1A-205ENST00000483122 HTRA4P83105 476 aaPredicted RBP10.81□□□□□ -0.68
VTI1A-205ENST00000483122 OR4C11Q6IEV9 310 aa10.81□□□□□ -0.68
VTI1A-205ENST00000483122 FRRS1Q6ZNA5 592 aa10.81□□□□□ -0.68
VTI1A-205ENST00000483122 TMED4Q7Z7H5 227 aa10.81□□□□□ -0.68
VTI1A-205ENST00000483122 TMEM150AQ86TG1 271 aa10.81□□□□□ -0.68
VTI1A-205ENST00000483122 TRAPPC5Q8IUR0 188 aa10.81□□□□□ -0.68
VTI1A-205ENST00000483122 SLC35F2Q8IXU6 374 aa10.81□□□□□ -0.68
VTI1A-205ENST00000483122 SYS1Q8N2H4 156 aa10.81□□□□□ -0.68
VTI1A-205ENST00000483122 OR5AR1Q8NGP9 310 aa10.81□□□□□ -0.68
VTI1A-205ENST00000483122 OR4C6Q8NH72 309 aa10.81□□□□□ -0.68
VTI1A-205ENST00000483122 SFXN5Q8TD22 340 aa10.81□□□□□ -0.68
VTI1A-205ENST00000483122 ASB13Q8WXK3 278 aa10.81□□□□□ -0.68
VTI1A-205ENST00000483122 SLC35A4Q96G79 324 aa10.81□□□□□ -0.68
VTI1A-205ENST00000483122 MACROD1Q9BQ69 325 aa10.81□□□□□ -0.68
VTI1A-205ENST00000483122 AIF1LQ9BQI0 150 aa10.81□□□□□ -0.68
VTI1A-205ENST00000483122 C1orf198Q9H425 327 aa10.81□□□□□ -0.68
VTI1A-205ENST00000483122 MEPEQ9NQ76 525 aaPredicted RBP10.81□□□□□ -0.68
VTI1A-205ENST00000483122 CXXC1Q9P0U4 656 aaPredicted RBP10.81□□□□□ -0.68
VTI1A-205ENST00000483122 FAM96BQ9Y3D0 163 aa10.81□□□□□ -0.68
VTI1A-205ENST00000483122 KIAA1549LQ6ZVL6 1849 aa10.81□□□□□ -0.68
VTI1A-205ENST00000483122 A0A1B0GTQ1 180 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.8□□□□□ -0.68
VTI1A-205ENST00000483122 CPED1A4D0V7 1026 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 OR2AT4A6NND4 320 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 CSF1P09603 554 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 AKAIN1P0CW23 69 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 SLC25A4P12235 298 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 ZNF44P15621 663 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 ACTA2P62736 377 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 POLR2LP62875 67 aaKnown RBP10.8□□□□□ -0.68
VTI1A-205ENST00000483122 ACTG2P63267 376 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 LTBQ06643 244 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 ILF3Q12906 894 aaKnown RBP eCLIP10.8□□□□□ -0.68
VTI1A-205ENST00000483122 RAB33AQ14088 237 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 HYAL4Q2M3T9 481 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 STAC2Q6ZMT1 411 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 ACOT7LQ6ZUV0 252 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 GTPBP8Q8N3Z3 284 aaPredicted RBP10.8□□□□□ -0.68
VTI1A-205ENST00000483122 OR56A1Q8NGH5 318 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 OR5M8Q8NGP6 311 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 OR1J4Q8NGS1 313 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 FIBINQ8TAL6 211 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 SLC2A12Q8TD20 617 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 ZNRF4Q8WWF5 429 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 ARL11Q969Q4 196 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 RAD51AP1Q96B01 352 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 GPR174Q9BXC1 333 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 SEC11CQ9BY50 192 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 ZDHHC5Q9C0B5 715 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 KLHL31Q9H511 634 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 RNF122Q9H9V4 155 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 UQCC1Q9NVA1 299 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 RPH3AQ9Y2J0 694 aaPredicted RBP10.8□□□□□ -0.68
VTI1A-205ENST00000483122 GOLGA4Q13439 2230 aaKnown RBP10.8□□□□□ -0.68
VTI1A-205ENST00000483122 A0A1B0GTI1 187 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 OR1F1O43749 312 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 LILRB5O75023 590 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 CD79AP11912 226 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 FOLR2P14207 255 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 PRF1P14222 555 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 ABCD3P28288 659 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 EFNB2P52799 333 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 FABP9Q0Z7S8 132 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 OR7A5Q15622 319 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 AMZ1Q400G9 498 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 LIPNQ5VXI9 398 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 FIP1L1Q6UN15 594 aaKnown RBP10.8□□□□□ -0.68
VTI1A-205ENST00000483122 ETV3LQ6ZN32 361 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 CMTM8Q8IZV2 173 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 OR1J2Q8NGS2 313 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 OR9A2Q8NGT5 310 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 OR2AG1Q9H205 316 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 C6orf106Q9H6K1 298 aaPredicted RBP10.8□□□□□ -0.68
VTI1A-205ENST00000483122 SFXN1Q9H9B4 322 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 ICAM5Q9UMF0 924 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 HS3ST2Q9Y278 367 aa10.8□□□□□ -0.68
VTI1A-205ENST00000483122 A0A1W2PR48 441 aa10.79□□□□□ -0.68
VTI1A-205ENST00000483122 ZNF705EA8MWA4 302 aaPredicted RBP10.79□□□□□ -0.68
VTI1A-205ENST00000483122 C1orf196B1AJZ1 125 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms