RNA–Protein interactions for RNA: ENST00000482879.5

SDC1-206, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-206ENST00000482879 ATCAYQ86WG3 371 aa10.91□□□□□ -0.66
SDC1-206ENST00000482879 KIF18BQ86Y91 864 aa10.91□□□□□ -0.66
SDC1-206ENST00000482879 UEVLDQ8IX04 471 aa10.91□□□□□ -0.66
SDC1-206ENST00000482879 RPRMLQ8N4K4 120 aa10.91□□□□□ -0.66
SDC1-206ENST00000482879 C9orf106Q8NAJ2 232 aa10.91□□□□□ -0.66
SDC1-206ENST00000482879 OR9K2Q8NGE7 335 aa10.91□□□□□ -0.66
SDC1-206ENST00000482879 FANK1Q8TC84 345 aa10.91□□□□□ -0.66
SDC1-206ENST00000482879 RNF128Q8TEB7 428 aa10.91□□□□□ -0.66
SDC1-206ENST00000482879 ZNF775Q96BV0 537 aaPredicted RBP10.91□□□□□ -0.66
SDC1-206ENST00000482879 SAMD8Q96LT4 415 aa10.91□□□□□ -0.66
SDC1-206ENST00000482879 TM9SF2Q99805 663 aa10.91□□□□□ -0.66
SDC1-206ENST00000482879 SF3B5Q9BWJ5 86 aaKnown RBP10.91□□□□□ -0.66
SDC1-206ENST00000482879 ENKD1Q9H0I2 346 aa10.91□□□□□ -0.66
SDC1-206ENST00000482879 OR52D1Q9H346 318 aa10.91□□□□□ -0.66
SDC1-206ENST00000482879 EGLN3Q9H6Z9 239 aa10.91□□□□□ -0.66
SDC1-206ENST00000482879 INIPQ9NRY2 104 aa10.91□□□□□ -0.66
SDC1-206ENST00000482879 KLHL9Q9P2J3 617 aa10.91□□□□□ -0.66
SDC1-206ENST00000482879 B3GAT1Q9P2W7 334 aa10.91□□□□□ -0.66
SDC1-206ENST00000482879 REV1Q9UBZ9 1251 aa10.91□□□□□ -0.66
SDC1-206ENST00000482879 TMEFF2Q9UIK5 374 aaPredicted RBP10.91□□□□□ -0.66
SDC1-206ENST00000482879 CLEC4AQ9UMR7 237 aa10.91□□□□□ -0.66
SDC1-206ENST00000482879 ORC6Q9Y5N6 252 aa10.91□□□□□ -0.66
SDC1-206ENST00000482879 CDH10Q9Y6N8 788 aa10.91□□□□□ -0.66
SDC1-206ENST00000482879 SPENQ96T58 3664 aaKnown RBP10.9□□□□□ -0.66
SDC1-206ENST00000482879 LOC102725191A0A1B0GVB3 256 aa10.9□□□□□ -0.66
SDC1-206ENST00000482879 A0A1W2PNV4 684 aa10.9□□□□□ -0.66
SDC1-206ENST00000482879 MBD3L4A6NDZ8 208 aaPredicted RBP10.9□□□□□ -0.66
SDC1-206ENST00000482879 MBD3L3A6NE82 208 aaPredicted RBP10.9□□□□□ -0.66
SDC1-206ENST00000482879 MBD3L5A6NJ08 208 aaPredicted RBP10.9□□□□□ -0.66
SDC1-206ENST00000482879 ZNF716A6NP11 495 aa10.9□□□□□ -0.66
SDC1-206ENST00000482879 H3BN98 237 aa10.9□□□□□ -0.66
SDC1-206ENST00000482879 PLGP00747 810 aaPredicted RBP10.9□□□□□ -0.66
SDC1-206ENST00000482879 TP53P04637 393 aaPredicted RBP10.9□□□□□ -0.66
SDC1-206ENST00000482879 STSP08842 583 aa10.9□□□□□ -0.66
SDC1-206ENST00000482879 GLI4P10075 376 aa10.9□□□□□ -0.66
SDC1-206ENST00000482879 HLA-DOBP13765 273 aa10.9□□□□□ -0.66
SDC1-206ENST00000482879 ZNF43P17038 809 aa10.9□□□□□ -0.66
SDC1-206ENST00000482879 GNLYP22749 145 aa10.9□□□□□ -0.66
SDC1-206ENST00000482879 POU1F1P28069 291 aa10.9□□□□□ -0.66
SDC1-206ENST00000482879 SLC6A6P31641 620 aa10.9□□□□□ -0.66
SDC1-206ENST00000482879 SLC16A1P53985 500 aa10.9□□□□□ -0.66
SDC1-206ENST00000482879 PER3P56645 1201 aa10.9□□□□□ -0.66
SDC1-206ENST00000482879 FXYD6P3P58550 94 aa10.9□□□□□ -0.66
SDC1-206ENST00000482879 CTXN1P60606 82 aa10.9□□□□□ -0.66
SDC1-206ENST00000482879 PMPCAQ10713 525 aa10.9□□□□□ -0.66
SDC1-206ENST00000482879 PDK3Q15120 406 aa10.9□□□□□ -0.66
SDC1-206ENST00000482879 POU4F3Q15319 338 aa10.9□□□□□ -0.66
SDC1-206ENST00000482879 EIF2S3LQ2VIR3 472 aaKnown RBP10.9□□□□□ -0.66
SDC1-206ENST00000482879 SLC36A3Q495N2 470 aa10.9□□□□□ -0.66
SDC1-206ENST00000482879 OR2A2Q6IF42 318 aa10.9□□□□□ -0.66
SDC1-206ENST00000482879 RPL13AP3Q6NVV1 102 aa10.9□□□□□ -0.66
SDC1-206ENST00000482879 THSD4Q6ZMP0 1018 aa10.9□□□□□ -0.66
SDC1-206ENST00000482879 SEM1Q6ZVN7 128 aa10.9□□□□□ -0.66
SDC1-206ENST00000482879 PXKQ7Z7A4 578 aa10.9□□□□□ -0.66
SDC1-206ENST00000482879 PARP8Q8N3A8 854 aa10.9□□□□□ -0.66
SDC1-206ENST00000482879 CLDN22Q8N7P3 220 aa10.9□□□□□ -0.66
SDC1-206ENST00000482879 LRRC75AQ8NAA5 344 aa10.9□□□□□ -0.66
SDC1-206ENST00000482879 ANKK1Q8NFD2 765 aa10.9□□□□□ -0.66
SDC1-206ENST00000482879 OR52L1Q8NGH7 329 aa10.9□□□□□ -0.66
SDC1-206ENST00000482879 MBD3L2Q8NHZ7 208 aaPredicted RBP10.9□□□□□ -0.66
SDC1-206ENST00000482879 NRG4Q8WWG1 115 aa10.9□□□□□ -0.66
SDC1-206ENST00000482879 TTYH2Q9BSA4 534 aa10.9□□□□□ -0.66
SDC1-206ENST00000482879 RNF122Q9H9V4 155 aa10.9□□□□□ -0.66
SDC1-206ENST00000482879 FANCFQ9NPI8 374 aa10.9□□□□□ -0.66
SDC1-206ENST00000482879 C8orf4Q9NR00 106 aa10.9□□□□□ -0.66
SDC1-206ENST00000482879 GLRX2Q9NS18 164 aa10.9□□□□□ -0.66
SDC1-206ENST00000482879 TBC1D23Q9NUY8 699 aa10.9□□□□□ -0.66
SDC1-206ENST00000482879 IL20Q9NYY1 176 aa10.9□□□□□ -0.66
SDC1-206ENST00000482879 IL20RAQ9UHF4 553 aa10.9□□□□□ -0.66
SDC1-206ENST00000482879 NOX1Q9Y5S8 564 aa10.9□□□□□ -0.66
SDC1-206ENST00000482879 IGKV3D-15A0A087WSY6 115 aa10.89□□□□□ -0.67
SDC1-206ENST00000482879 A0A1W2PRG6 482 aa10.89□□□□□ -0.67
SDC1-206ENST00000482879 MCIDASD6RGH6 385 aa10.89□□□□□ -0.67
SDC1-206ENST00000482879 E9PLN8 166 aa10.89□□□□□ -0.67
SDC1-206ENST00000482879 CCL21O00585 134 aa10.89□□□□□ -0.67
SDC1-206ENST00000482879 GPR171O14626 319 aa10.89□□□□□ -0.67
SDC1-206ENST00000482879 IL2RAP01589 272 aa10.89□□□□□ -0.67
SDC1-206ENST00000482879 YES1P07947 543 aa10.89□□□□□ -0.67
SDC1-206ENST00000482879 CD14P08571 375 aa10.89□□□□□ -0.67
SDC1-206ENST00000482879 CDH2P19022 906 aaPredicted RBP10.89□□□□□ -0.67
SDC1-206ENST00000482879 TIMP3P35625 211 aa10.89□□□□□ -0.67
SDC1-206ENST00000482879 UQCRFS1P47985 274 aa10.89□□□□□ -0.67
SDC1-206ENST00000482879 CRISP1P54107 249 aa10.89□□□□□ -0.67
SDC1-206ENST00000482879 RAD23AP54725 363 aa10.89□□□□□ -0.67
SDC1-206ENST00000482879 ERVK-25P63136 954 aa10.89□□□□□ -0.67
SDC1-206ENST00000482879 POU3F1Q03052 451 aaPredicted RBP10.89□□□□□ -0.67
SDC1-206ENST00000482879 ZIK1Q3SY52 487 aaPredicted RBP10.89□□□□□ -0.67
SDC1-206ENST00000482879 CLEC12AQ5QGZ9 265 aa10.89□□□□□ -0.67
SDC1-206ENST00000482879 EEF1A1P5Q5VTE0 462 aa10.89□□□□□ -0.67
SDC1-206ENST00000482879 TMEM211Q6ICI0 200 aa10.89□□□□□ -0.67
SDC1-206ENST00000482879 DPY19L2P2Q6ZN68 376 aa10.89□□□□□ -0.67
SDC1-206ENST00000482879 CREB3L2Q70SY1 520 aa10.89□□□□□ -0.67
SDC1-206ENST00000482879 SLC35D2Q76EJ3 337 aa10.89□□□□□ -0.67
SDC1-206ENST00000482879 TUSC5Q8IXB3 177 aa10.89□□□□□ -0.67
SDC1-206ENST00000482879 PACRGLQ8N7B6 248 aa10.89□□□□□ -0.67
SDC1-206ENST00000482879 PRR7Q8TB68 274 aa10.89□□□□□ -0.67
SDC1-206ENST00000482879 TEX47Q8TBZ9 253 aa10.89□□□□□ -0.67
SDC1-206ENST00000482879 INTS12Q96CB8 462 aaKnown RBP10.89□□□□□ -0.67
SDC1-206ENST00000482879 GMPPAQ96IJ6 420 aaPredicted RBP10.89□□□□□ -0.67
SDC1-206ENST00000482879 TXNDC15Q96J42 360 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms