RNA–Protein interactions for RNA: ENST00000482086.5

PCCB-215, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-215ENST00000482086 CXCR4P61073 352 aa13.09□□□□□ -0.31
PCCB-215ENST00000482086 H3F3AP84243 136 aa13.09□□□□□ -0.31
PCCB-215ENST00000482086 CD47Q08722 323 aa13.09□□□□□ -0.31
PCCB-215ENST00000482086 CDK5R2Q13319 367 aa13.09□□□□□ -0.31
PCCB-215ENST00000482086 MS4A18Q3C1V0 323 aa13.09□□□□□ -0.31
PCCB-215ENST00000482086 GXYLT1Q4G148 440 aa13.09□□□□□ -0.31
PCCB-215ENST00000482086 KRTCAP3Q53RY4 240 aa13.09□□□□□ -0.31
PCCB-215ENST00000482086 FAM205BPQ63HN1 556 aa13.09□□□□□ -0.31
PCCB-215ENST00000482086 CHMP1BQ7LBR1 199 aa13.09□□□□□ -0.31
PCCB-215ENST00000482086 CCDC71Q8IV32 467 aaPredicted RBP13.09□□□□□ -0.31
PCCB-215ENST00000482086 SIAH3Q8IW03 269 aa13.09□□□□□ -0.31
PCCB-215ENST00000482086 PM20D2Q8IYS1 436 aa13.09□□□□□ -0.31
PCCB-215ENST00000482086 UBQLNLQ8IYU4 475 aa13.09□□□□□ -0.31
PCCB-215ENST00000482086 FAM26EQ8N5C1 309 aa13.09□□□□□ -0.31
PCCB-215ENST00000482086 TMEM99Q8N816 258 aa13.09□□□□□ -0.31
PCCB-215ENST00000482086 TEX19Q8NA77 164 aa13.09□□□□□ -0.31
PCCB-215ENST00000482086 OR10D3Q8NH80 312 aa13.09□□□□□ -0.31
PCCB-215ENST00000482086 TMEM163Q8TC26 289 aa13.09□□□□□ -0.31
PCCB-215ENST00000482086 HDAC2Q92769 488 aaKnown RBP13.09□□□□□ -0.31
PCCB-215ENST00000482086 OXGR1Q96P68 337 aa13.09□□□□□ -0.31
PCCB-215ENST00000482086 TAAR6Q96RI8 345 aa13.09□□□□□ -0.31
PCCB-215ENST00000482086 SF3B5Q9BWJ5 86 aaKnown RBP13.09□□□□□ -0.31
PCCB-215ENST00000482086 TXNIPQ9H3M7 391 aa13.09□□□□□ -0.31
PCCB-215ENST00000482086 UBAP1Q9NZ09 502 aa13.09□□□□□ -0.31
PCCB-215ENST00000482086 BLOC1S6Q9UL45 172 aa13.09□□□□□ -0.31
PCCB-215ENST00000482086 ZMIZ1Q9ULJ6 1067 aa13.09□□□□□ -0.31
PCCB-215ENST00000482086 LIPGQ9Y5X9 500 aa13.09□□□□□ -0.31
PCCB-215ENST00000482086 ALPK2Q86TB3 2170 aa13.09□□□□□ -0.31
PCCB-215ENST00000482086 OR14I1A6ND48 311 aa13.08□□□□□ -0.32
PCCB-215ENST00000482086 SYNGR4O95473 234 aa13.08□□□□□ -0.32
PCCB-215ENST00000482086 F13BP05160 661 aa13.08□□□□□ -0.32
PCCB-215ENST00000482086 CHN2P52757 468 aa13.08□□□□□ -0.32
PCCB-215ENST00000482086 SUCLG1P53597 346 aaKnown RBP13.08□□□□□ -0.32
PCCB-215ENST00000482086 CLDN15P56746 228 aa13.08□□□□□ -0.32
PCCB-215ENST00000482086 RPL27P61353 136 aaKnown RBP13.08□□□□□ -0.32
PCCB-215ENST00000482086 ERVK-25P63136 954 aa13.08□□□□□ -0.32
PCCB-215ENST00000482086 EFNB1P98172 346 aa13.08□□□□□ -0.32
PCCB-215ENST00000482086 C19orf57Q0VDD7 668 aa13.08□□□□□ -0.32
PCCB-215ENST00000482086 OCLNQ16625 522 aa13.08□□□□□ -0.32
PCCB-215ENST00000482086 RBM48Q5RL73 367 aaKnown RBP13.08□□□□□ -0.32
PCCB-215ENST00000482086 C6orf141Q5SZD1 244 aa13.08□□□□□ -0.32
PCCB-215ENST00000482086 UEVLDQ8IX04 471 aa13.08□□□□□ -0.32
PCCB-215ENST00000482086 TCEANCQ8N8B7 351 aa13.08□□□□□ -0.32
PCCB-215ENST00000482086 TIMP4Q99727 224 aa13.08□□□□□ -0.32
PCCB-215ENST00000482086 RASSF1Q9NS23 344 aa13.08□□□□□ -0.32
PCCB-215ENST00000482086 ZNF226Q9NYT6 803 aa13.08□□□□□ -0.32
PCCB-215ENST00000482086 SEC14L4Q9UDX3 406 aa13.08□□□□□ -0.32
PCCB-215ENST00000482086 MCTS1Q9ULC4 181 aaKnown RBP13.08□□□□□ -0.32
PCCB-215ENST00000482086 SPTA1P02549 2419 aa13.08□□□□□ -0.32
PCCB-215ENST00000482086 A6NIZ1 184 aa13.07□□□□□ -0.32
PCCB-215ENST00000482086 NPIPA5E9PKD4 350 aa13.07□□□□□ -0.32
PCCB-215ENST00000482086 XKRYO14609 159 aa13.07□□□□□ -0.32
PCCB-215ENST00000482086 ZZEF1O43149 2961 aa13.07□□□□□ -0.32
PCCB-215ENST00000482086 TLX2O43763 284 aaPredicted RBP13.07□□□□□ -0.32
PCCB-215ENST00000482086 CXCL13O43927 109 aa13.07□□□□□ -0.32
PCCB-215ENST00000482086 TNFAIP8O95379 198 aa13.07□□□□□ -0.32
PCCB-215ENST00000482086 BCL10O95999 233 aa13.07□□□□□ -0.32
PCCB-215ENST00000482086 ZNF43P17038 809 aa13.07□□□□□ -0.32
PCCB-215ENST00000482086 GABRB1P18505 474 aa13.07□□□□□ -0.32
PCCB-215ENST00000482086 P2RY4P51582 365 aa13.07□□□□□ -0.32
PCCB-215ENST00000482086 RAP1BP61224 184 aa13.07□□□□□ -0.32
PCCB-215ENST00000482086 RAP1AP62834 184 aa13.07□□□□□ -0.32
PCCB-215ENST00000482086 HSF1Q00613 529 aa13.07□□□□□ -0.32
PCCB-215ENST00000482086 C1DQ13901 141 aaKnown RBP13.07□□□□□ -0.32
PCCB-215ENST00000482086 POU4F3Q15319 338 aa13.07□□□□□ -0.32
PCCB-215ENST00000482086 SF3B4Q15427 424 aaKnown RBP eCLIP13.07□□□□□ -0.321e-6■■■■□ 24.6
PCCB-215ENST00000482086 NADK2Q4G0N4 442 aa13.07□□□□□ -0.32
PCCB-215ENST00000482086 TMEM201Q5SNT2 666 aa13.07□□□□□ -0.32
PCCB-215ENST00000482086 UGT2A3Q6UWM9 527 aa13.07□□□□□ -0.32
PCCB-215ENST00000482086 FAM122BQ7Z309 247 aa13.07□□□□□ -0.32
PCCB-215ENST00000482086 ADCK1Q86TW2 530 aa13.07□□□□□ -0.32
PCCB-215ENST00000482086 IGFN1Q86VF2 1251 aa13.07□□□□□ -0.32
PCCB-215ENST00000482086 JAZF1Q86VZ6 243 aa13.07□□□□□ -0.32
PCCB-215ENST00000482086 ARIH2OSQ8N7S6 290 aa13.07□□□□□ -0.32
PCCB-215ENST00000482086 RFKQ969G6 155 aa13.07□□□□□ -0.32
PCCB-215ENST00000482086 RELTQ969Z4 430 aa13.07□□□□□ -0.32
PCCB-215ENST00000482086 SNX18Q96RF0 628 aa13.07□□□□□ -0.32
PCCB-215ENST00000482086 SLC25A18Q9H1K4 315 aa13.07□□□□□ -0.32
PCCB-215ENST00000482086 SCN3BQ9NY72 215 aa13.07□□□□□ -0.32
PCCB-215ENST00000482086 H2AFY2Q9P0M6 372 aaPredicted RBP13.07□□□□□ -0.32
PCCB-215ENST00000482086 ZNF346Q9UL40 294 aaKnown RBP13.07□□□□□ -0.32
PCCB-215ENST00000482086 NPIPA1Q9UND3 350 aa13.07□□□□□ -0.32
PCCB-215ENST00000482086 MYRFQ9Y2G1 1151 aa13.07□□□□□ -0.32
PCCB-215ENST00000482086 PKD1L2Q7Z442 2459 aa13.07□□□□□ -0.32
PCCB-215ENST00000482086 PRR23D1E9PI22 279 aaPredicted RBP13.06□□□□□ -0.32
PCCB-215ENST00000482086 AHCYL1O43865 530 aa13.06□□□□□ -0.32
PCCB-215ENST00000482086 PRKYO43930 277 aa13.06□□□□□ -0.32
PCCB-215ENST00000482086 CCDC159P0C7I6 412 aa13.06□□□□□ -0.32
PCCB-215ENST00000482086 PRR23D2P0DMB1 279 aaPredicted RBP13.06□□□□□ -0.32
PCCB-215ENST00000482086 ACVR2AP27037 513 aa13.06□□□□□ -0.32
PCCB-215ENST00000482086 POU3F1Q03052 451 aaPredicted RBP13.06□□□□□ -0.32
PCCB-215ENST00000482086 SRYQ05066 204 aa13.06□□□□□ -0.32
PCCB-215ENST00000482086 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.06□□□□□ -0.32
PCCB-215ENST00000482086 KLRB1Q12918 225 aa13.06□□□□□ -0.32
PCCB-215ENST00000482086 ACKR1Q16570 336 aa13.06□□□□□ -0.32
PCCB-215ENST00000482086 SLC35F1Q5T1Q4 408 aa13.06□□□□□ -0.32
PCCB-215ENST00000482086 SLC35D2Q76EJ3 337 aa13.06□□□□□ -0.32
PCCB-215ENST00000482086 LSRQ86X29 649 aaPredicted RBP13.06□□□□□ -0.32
PCCB-215ENST00000482086 GID4Q8IVV7 300 aa13.06□□□□□ -0.32
PCCB-215ENST00000482086 GHDCQ8N2G8 530 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms