RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 RSPO3Q9BXY4 272 aaPredicted RBP13.26□□□□□ -0.29
LIMS3-203ENST00000480744 NELFAQ9H3P2 528 aa13.26□□□□□ -0.29
LIMS3-203ENST00000480744 C12orf10Q9HB07 376 aa13.26□□□□□ -0.29
LIMS3-203ENST00000480744 GPR35Q9HC97 309 aa13.26□□□□□ -0.29
LIMS3-203ENST00000480744 SELENONQ9NZV5 590 aa13.26□□□□□ -0.29
LIMS3-203ENST00000480744 B3GAT1Q9P2W7 334 aa13.26□□□□□ -0.29
LIMS3-203ENST00000480744 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.26□□□□□ -0.29
LIMS3-203ENST00000480744 SLC13A4Q9UKG4 626 aa13.26□□□□□ -0.29
LIMS3-203ENST00000480744 IGKV1D-42A0A075B6H8 117 aa13.25□□□□□ -0.29
LIMS3-203ENST00000480744 TRAV36DV7A0A075B6V5 113 aa13.25□□□□□ -0.29
LIMS3-203ENST00000480744 AKAP8O43823 692 aaKnown RBP13.25□□□□□ -0.29
LIMS3-203ENST00000480744 TPST1O60507 370 aa13.25□□□□□ -0.29
LIMS3-203ENST00000480744 SEC14L2O76054 403 aa13.25□□□□□ -0.29
LIMS3-203ENST00000480744 ZNF432O94892 652 aa13.25□□□□□ -0.29
LIMS3-203ENST00000480744 CELA3BP08861 270 aa13.25□□□□□ -0.29
LIMS3-203ENST00000480744 IGHV4-31P0DP07 118 aa13.25□□□□□ -0.29
LIMS3-203ENST00000480744 NQO1P15559 274 aaKnown RBP13.25□□□□□ -0.29
LIMS3-203ENST00000480744 PAX7P23759 505 aa13.25□□□□□ -0.29
LIMS3-203ENST00000480744 AQP1P29972 269 aa13.25□□□□□ -0.29
LIMS3-203ENST00000480744 CALCRP30988 508 aa13.25□□□□□ -0.29
LIMS3-203ENST00000480744 MRPL19P49406 292 aaKnown RBP13.25□□□□□ -0.29
LIMS3-203ENST00000480744 IDH3GP51553 393 aaPredicted RBP13.25□□□□□ -0.29
LIMS3-203ENST00000480744 RGS8P57771 180 aaPredicted RBP13.25□□□□□ -0.29
LIMS3-203ENST00000480744 LSM11P83369 360 aaKnown RBP eCLIP13.25□□□□□ -0.29
LIMS3-203ENST00000480744 NPRL3Q12980 569 aa13.25□□□□□ -0.29
LIMS3-203ENST00000480744 SCARB2Q14108 478 aa13.25□□□□□ -0.29
LIMS3-203ENST00000480744 ADIPOQQ15848 244 aa13.25□□□□□ -0.29
LIMS3-203ENST00000480744 CEACAM16Q2WEN9 425 aa13.25□□□□□ -0.29
LIMS3-203ENST00000480744 GLIPR1L2Q4G1C9 344 aa13.25□□□□□ -0.29
LIMS3-203ENST00000480744 AGKQ53H12 422 aa13.25□□□□□ -0.29
LIMS3-203ENST00000480744 CARD17Q5XLA6 110 aa13.25□□□□□ -0.29
LIMS3-203ENST00000480744 DHRS4L2Q6PKH6 230 aa13.25□□□□□ -0.29
LIMS3-203ENST00000480744 C5orf46Q6UWT4 87 aa13.25□□□□□ -0.29
LIMS3-203ENST00000480744 H1FNTQ75WM6 255 aaPredicted RBP13.25□□□□□ -0.29
LIMS3-203ENST00000480744 PIK3C3Q8NEB9 887 aa13.25□□□□□ -0.29
LIMS3-203ENST00000480744 DNAJA4Q8WW22 397 aaPredicted RBP13.25□□□□□ -0.29
LIMS3-203ENST00000480744 DYDC1Q8WWB3 177 aa13.25□□□□□ -0.29
LIMS3-203ENST00000480744 ZNF317Q96PQ6 595 aaPredicted RBP13.25□□□□□ -0.29
LIMS3-203ENST00000480744 BEX2Q9BXY8 128 aa13.25□□□□□ -0.29
LIMS3-203ENST00000480744 CRLF2Q9HC73 371 aa13.25□□□□□ -0.29
LIMS3-203ENST00000480744 VAPAQ9P0L0 249 aa13.25□□□□□ -0.29
LIMS3-203ENST00000480744 CRNNQ9UBG3 495 aaPredicted RBP13.25□□□□□ -0.29
LIMS3-203ENST00000480744 CDC42EP3Q9UKI2 254 aa13.25□□□□□ -0.29
LIMS3-203ENST00000480744 B9A039 149 aa13.24□□□□□ -0.29
LIMS3-203ENST00000480744 RPL36A-HNRNPH2H7BZ11 118 aa13.24□□□□□ -0.29
LIMS3-203ENST00000480744 M0R3G1 203 aa13.24□□□□□ -0.29
LIMS3-203ENST00000480744 TGDSO95455 350 aa13.24□□□□□ -0.29
LIMS3-203ENST00000480744 FAM157CP0CG43 387 aa13.24□□□□□ -0.29
LIMS3-203ENST00000480744 HOXB1P14653 301 aaPredicted RBP13.24□□□□□ -0.29
LIMS3-203ENST00000480744 SLC6A2P23975 617 aa13.24□□□□□ -0.29
LIMS3-203ENST00000480744 AQP5P55064 265 aa13.24□□□□□ -0.29
LIMS3-203ENST00000480744 ULK3Q6PHR2 472 aa13.24□□□□□ -0.29
LIMS3-203ENST00000480744 NET1Q7Z628 596 aaPredicted RBP13.24□□□□□ -0.29
LIMS3-203ENST00000480744 MYPOPQ86VE0 399 aaPredicted RBP13.24□□□□□ -0.29
LIMS3-203ENST00000480744 UEVLDQ8IX04 471 aa13.24□□□□□ -0.29
LIMS3-203ENST00000480744 C10orf53Q8N6V4 93 aa13.24□□□□□ -0.29
LIMS3-203ENST00000480744 LSMEM1Q8N8F7 131 aa13.24□□□□□ -0.29
LIMS3-203ENST00000480744 OR4F15Q8NGB8 312 aa13.24□□□□□ -0.29
LIMS3-203ENST00000480744 ZNF837Q96EG3 531 aaPredicted RBP13.24□□□□□ -0.29
LIMS3-203ENST00000480744 SLC47A1Q96FL8 570 aa13.24□□□□□ -0.29
LIMS3-203ENST00000480744 MAGEB18Q96M61 343 aa13.24□□□□□ -0.29
LIMS3-203ENST00000480744 OR2M2Q96R28 347 aa13.24□□□□□ -0.29
LIMS3-203ENST00000480744 ZNF607Q96SK3 696 aa13.24□□□□□ -0.29
LIMS3-203ENST00000480744 CCDC28BQ9BUN5 200 aa13.24□□□□□ -0.29
LIMS3-203ENST00000480744 IKZF5Q9H5V7 419 aa13.24□□□□□ -0.29
LIMS3-203ENST00000480744 TMEM27Q9HBJ8 222 aa13.24□□□□□ -0.29
LIMS3-203ENST00000480744 MOV10Q9HCE1 1003 aaKnown RBP13.24□□□□□ -0.29
LIMS3-203ENST00000480744 KLHL14Q9P2G3 628 aa13.24□□□□□ -0.29
LIMS3-203ENST00000480744 TESQ9UGI8 421 aaKnown RBP13.24□□□□□ -0.29
LIMS3-203ENST00000480744 CORO2BQ9UQ03 480 aa13.24□□□□□ -0.29
LIMS3-203ENST00000480744 CUBNO60494 3623 aa13.23□□□□□ -0.29
LIMS3-203ENST00000480744 PRORSD1PA6NEY8 169 aa13.23□□□□□ -0.29
LIMS3-203ENST00000480744 EVPLLA8MZ36 301 aa13.23□□□□□ -0.29
LIMS3-203ENST00000480744 TRAF3IP2O43734 574 aaPredicted RBP13.23□□□□□ -0.29
LIMS3-203ENST00000480744 PDE5AO76074 875 aa13.23□□□□□ -0.29
LIMS3-203ENST00000480744 HPRP00739 348 aa13.23□□□□□ -0.29
LIMS3-203ENST00000480744 IGLV1-44P01699 117 aa13.23□□□□□ -0.29
LIMS3-203ENST00000480744 CBR1P16152 277 aa13.23□□□□□ -0.29
LIMS3-203ENST00000480744 NR4A2P43354 598 aa13.23□□□□□ -0.29
LIMS3-203ENST00000480744 GZMKP49863 264 aa13.23□□□□□ -0.29
LIMS3-203ENST00000480744 OR1Q1Q15612 314 aa13.23□□□□□ -0.29
LIMS3-203ENST00000480744 C3orf36Q3SXR2 165 aa13.23□□□□□ -0.29
LIMS3-203ENST00000480744 IQCCQ4KMZ1 466 aa13.23□□□□□ -0.29
LIMS3-203ENST00000480744 FAM91A1Q658Y4 838 aa13.23□□□□□ -0.29
LIMS3-203ENST00000480744 MDP1Q86V88 176 aa13.23□□□□□ -0.29
LIMS3-203ENST00000480744 ARMC8Q8IUR7 673 aa13.23□□□□□ -0.29
LIMS3-203ENST00000480744 ANKK1Q8NFD2 765 aa13.23□□□□□ -0.29
LIMS3-203ENST00000480744 FOXN4Q96NZ1 517 aa13.23□□□□□ -0.29
LIMS3-203ENST00000480744 EPYCQ99645 322 aa13.23□□□□□ -0.29
LIMS3-203ENST00000480744 EMC6Q9BV81 110 aa13.23□□□□□ -0.29
LIMS3-203ENST00000480744 ASPNQ9BXN1 380 aa13.23□□□□□ -0.29
LIMS3-203ENST00000480744 SHARPINQ9H0F6 387 aa13.23□□□□□ -0.29
LIMS3-203ENST00000480744 CHODLQ9H9P2 273 aa13.23□□□□□ -0.29
LIMS3-203ENST00000480744 ANGPT4Q9Y264 503 aa13.23□□□□□ -0.29
LIMS3-203ENST00000480744 A0A087WUJ7 227 aa13.22□□□□□ -0.29
LIMS3-203ENST00000480744 LOC390937A0A1W2PQ73 354 aa13.22□□□□□ -0.29
LIMS3-203ENST00000480744 ZNF503-AS2A6NEH8 195 aa13.22□□□□□ -0.29
LIMS3-203ENST00000480744 VSTM5A8MXK1 200 aa13.22□□□□□ -0.29
LIMS3-203ENST00000480744 VWC2LB2RUY7 222 aa13.22□□□□□ -0.29
LIMS3-203ENST00000480744 MS4A18H0YCH9 400 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms