RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 OR1Q1Q15612 314 aa10.02□□□□□ -0.81
CCM2-213ENST00000480658 TBRG1Q3YBR2 411 aa10.02□□□□□ -0.81
CCM2-213ENST00000480658 PXKQ7Z7A4 578 aa10.02□□□□□ -0.81
CCM2-213ENST00000480658 EPHX4Q8IUS5 362 aa10.02□□□□□ -0.81
CCM2-213ENST00000480658 PIP4P2Q8N4L2 257 aa10.02□□□□□ -0.81
CCM2-213ENST00000480658 WDR31Q8NA23 367 aa10.02□□□□□ -0.81
CCM2-213ENST00000480658 ZNF417Q8TAU3 575 aa10.02□□□□□ -0.81
CCM2-213ENST00000480658 KTI12Q96EK9 354 aaPredicted RBP10.02□□□□□ -0.81
CCM2-213ENST00000480658 SLC41A3Q96GZ6 507 aa10.02□□□□□ -0.81
CCM2-213ENST00000480658 ZNF587Q96SQ5 575 aaPredicted RBP10.02□□□□□ -0.81
CCM2-213ENST00000480658 CACNG6Q9BXT2 260 aa10.02□□□□□ -0.81
CCM2-213ENST00000480658 KAT8Q9H7Z6 458 aaKnown RBP10.02□□□□□ -0.81
CCM2-213ENST00000480658 SLAMF8Q9P0V8 285 aa10.02□□□□□ -0.81
CCM2-213ENST00000480658 KLHL14Q9P2G3 628 aa10.02□□□□□ -0.81
CCM2-213ENST00000480658 STX18Q9P2W9 335 aaKnown RBP10.02□□□□□ -0.81
CCM2-213ENST00000480658 CRNNQ9UBG3 495 aaPredicted RBP10.02□□□□□ -0.81
CCM2-213ENST00000480658 BAG5Q9UL15 447 aa10.02□□□□□ -0.81
CCM2-213ENST00000480658 ATP23Q9Y6H3 246 aa10.02□□□□□ -0.81
CCM2-213ENST00000480658 ZNF726A6NNF4 738 aa10.01□□□□□ -0.81
CCM2-213ENST00000480658 B9A039 149 aa10.01□□□□□ -0.81
CCM2-213ENST00000480658 MGRN1O60291 552 aa10.01□□□□□ -0.81
CCM2-213ENST00000480658 ZNF432O94892 652 aa10.01□□□□□ -0.81
CCM2-213ENST00000480658 LGI1O95970 557 aa10.01□□□□□ -0.81
CCM2-213ENST00000480658 IGF2P01344 180 aa10.01□□□□□ -0.81
CCM2-213ENST00000480658 IGKV3-15P01624 115 aa10.01□□□□□ -0.81
CCM2-213ENST00000480658 IGHV4-39P01824 125 aa10.01□□□□□ -0.81
CCM2-213ENST00000480658 CDH2P19022 906 aaPredicted RBP10.01□□□□□ -0.81
CCM2-213ENST00000480658 CD247P20963 164 aa10.01□□□□□ -0.81
CCM2-213ENST00000480658 HTR2AP28223 471 aa10.01□□□□□ -0.81
CCM2-213ENST00000480658 AQP1P29972 269 aa10.01□□□□□ -0.81
CCM2-213ENST00000480658 GRPRP30550 384 aa10.01□□□□□ -0.81
CCM2-213ENST00000480658 EFNA4P52798 201 aa10.01□□□□□ -0.81
CCM2-213ENST00000480658 PMS2P3Q13401 168 aa10.01□□□□□ -0.81
CCM2-213ENST00000480658 TNK1Q13470 666 aa10.01□□□□□ -0.81
CCM2-213ENST00000480658 ADRM1Q16186 407 aa10.01□□□□□ -0.81
CCM2-213ENST00000480658 C9orf135Q5VTT2 229 aa10.01□□□□□ -0.81
CCM2-213ENST00000480658 C11orf71Q6IPW1 123 aa10.01□□□□□ -0.81
CCM2-213ENST00000480658 TTC33Q6PID6 262 aaPredicted RBP10.01□□□□□ -0.81
CCM2-213ENST00000480658 DNM1P46Q6ZS02 220 aa10.01□□□□□ -0.81
CCM2-213ENST00000480658 ARPINQ7Z6K5 226 aa10.01□□□□□ -0.81
CCM2-213ENST00000480658 DPPA2Q7Z7J5 298 aa10.01□□□□□ -0.81
CCM2-213ENST00000480658 C10orf53Q8N6V4 93 aa10.01□□□□□ -0.81
CCM2-213ENST00000480658 ZNF540Q8NDQ6 660 aa10.01□□□□□ -0.81
CCM2-213ENST00000480658 NUP37Q8NFH4 326 aa10.01□□□□□ -0.81
CCM2-213ENST00000480658 PROX1Q92786 737 aa10.01□□□□□ -0.81
CCM2-213ENST00000480658 REG4Q9BYZ8 158 aa10.01□□□□□ -0.81
CCM2-213ENST00000480658 PCDHAC1Q9H158 963 aa10.01□□□□□ -0.81
CCM2-213ENST00000480658 ZNF385DQ9H6B1 395 aa10.01□□□□□ -0.81
CCM2-213ENST00000480658 CA10Q9NS85 328 aa10.01□□□□□ -0.81
CCM2-213ENST00000480658 GID8Q9NWU2 228 aa10.01□□□□□ -0.81
CCM2-213ENST00000480658 SPEF1Q9Y4P9 236 aa10.01□□□□□ -0.81
CCM2-213ENST00000480658 TRAPPC13A5PLN9 417 aa10□□□□□ -0.81
CCM2-213ENST00000480658 E7EQL1 145 aa10□□□□□ -0.81
CCM2-213ENST00000480658 NDUFAB1O14561 156 aa10□□□□□ -0.81
CCM2-213ENST00000480658 HIST1H2ABP04908 130 aa10□□□□□ -0.81
CCM2-213ENST00000480658 LSP1P33241 339 aa10□□□□□ -0.81
CCM2-213ENST00000480658 ACVR1BP36896 505 aa10□□□□□ -0.81
CCM2-213ENST00000480658 RBM34P42696 430 aaKnown RBP10□□□□□ -0.81
CCM2-213ENST00000480658 MTPNP58546 118 aa10□□□□□ -0.81
CCM2-213ENST00000480658 RPS23P62266 143 aaKnown RBP10□□□□□ -0.81
CCM2-213ENST00000480658 HOXC5Q00444 222 aa10□□□□□ -0.81
CCM2-213ENST00000480658 POU3F1Q03052 451 aaPredicted RBP10□□□□□ -0.81
CCM2-213ENST00000480658 EFNB3Q15768 340 aa10□□□□□ -0.81
CCM2-213ENST00000480658 NPTX1Q15818 432 aa10□□□□□ -0.81
CCM2-213ENST00000480658 VMACQ2NL98 169 aa10□□□□□ -0.81
CCM2-213ENST00000480658 NRN1LQ496H8 165 aa10□□□□□ -0.81
CCM2-213ENST00000480658 HIKESHIQ53FT3 197 aa10□□□□□ -0.81
CCM2-213ENST00000480658 HIST3H2AQ7L7L0 130 aa10□□□□□ -0.81
CCM2-213ENST00000480658 OR5J2Q8NH18 312 aa10□□□□□ -0.81
CCM2-213ENST00000480658 NEUROG1Q92886 237 aa10□□□□□ -0.81
CCM2-213ENST00000480658 HIST1H2ACQ93077 130 aa10□□□□□ -0.81
CCM2-213ENST00000480658 TAAR8Q969N4 342 aa10□□□□□ -0.81
CCM2-213ENST00000480658 OR2M2Q96R28 347 aa10□□□□□ -0.81
CCM2-213ENST00000480658 MCHR1Q99705 422 aa10□□□□□ -0.81
CCM2-213ENST00000480658 ARHGDIGQ99819 225 aa10□□□□□ -0.81
CCM2-213ENST00000480658 SMR3AQ99954 134 aa10□□□□□ -0.81
CCM2-213ENST00000480658 ECSITQ9BQ95 431 aa10□□□□□ -0.81
CCM2-213ENST00000480658 IKZF5Q9H5V7 419 aa10□□□□□ -0.81
CCM2-213ENST00000480658 ZNF442Q9H7R0 627 aa10□□□□□ -0.81
CCM2-213ENST00000480658 CRLF2Q9HC73 371 aa10□□□□□ -0.81
CCM2-213ENST00000480658 MED4Q9NPJ6 270 aa10□□□□□ -0.81
CCM2-213ENST00000480658 NANSQ9NR45 359 aa10□□□□□ -0.81
CCM2-213ENST00000480658 B3GAT1Q9P2W7 334 aa10□□□□□ -0.81
CCM2-213ENST00000480658 ZNF229Q9UJW7 825 aa10□□□□□ -0.81
CCM2-213ENST00000480658 A0A1W2PR80 420 aa9.99□□□□□ -0.81
CCM2-213ENST00000480658 GMNCA6NCL1 334 aa9.99□□□□□ -0.81
CCM2-213ENST00000480658 CENPBD1B2RD01 187 aa9.99□□□□□ -0.81
CCM2-213ENST00000480658 RNF223E7ERA6 249 aa9.99□□□□□ -0.81
CCM2-213ENST00000480658 ATP6V1G2-DDX39BF2Z307 99 aa9.99□□□□□ -0.81
CCM2-213ENST00000480658 M0QX08 132 aa9.99□□□□□ -0.81
CCM2-213ENST00000480658 TRAF3IP2O43734 574 aaPredicted RBP9.99□□□□□ -0.81
CCM2-213ENST00000480658 SSX4O60224 188 aa9.99□□□□□ -0.81
CCM2-213ENST00000480658 UBL3O95164 117 aa9.99□□□□□ -0.81
CCM2-213ENST00000480658 IGLV1-44P01699 117 aa9.99□□□□□ -0.81
CCM2-213ENST00000480658 CD8AP01732 235 aa9.99□□□□□ -0.81
CCM2-213ENST00000480658 THRBP10828 461 aa9.99□□□□□ -0.81
CCM2-213ENST00000480658 CBR1P16152 277 aa9.99□□□□□ -0.81
CCM2-213ENST00000480658 SERPINF1P36955 418 aa9.99□□□□□ -0.81
CCM2-213ENST00000480658 PPOXP50336 477 aa9.99□□□□□ -0.81
CCM2-213ENST00000480658 ARFIP2P53365 341 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms