RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 FZD7O75084 574 aa16.34■□□□□ 0.21
ABCF3-214ENST00000480562 SEC14L2O76054 403 aa16.34■□□□□ 0.21
ABCF3-214ENST00000480562 ETS2P15036 469 aa16.34■□□□□ 0.21
ABCF3-214ENST00000480562 PAX7P23759 505 aa16.34■□□□□ 0.21
ABCF3-214ENST00000480562 IGFBP5P24593 272 aa16.34■□□□□ 0.21
ABCF3-214ENST00000480562 PRKAR1BP31321 381 aa16.34■□□□□ 0.21
ABCF3-214ENST00000480562 STX1BP61266 288 aa16.34■□□□□ 0.21
ABCF3-214ENST00000480562 EFNB3Q15768 340 aa16.34■□□□□ 0.21
ABCF3-214ENST00000480562 CEACAM16Q2WEN9 425 aa16.34■□□□□ 0.21
ABCF3-214ENST00000480562 C3orf36Q3SXR2 165 aa16.34■□□□□ 0.21
ABCF3-214ENST00000480562 GLIPR1L2Q4G1C9 344 aa16.34■□□□□ 0.21
ABCF3-214ENST00000480562 GCNT6Q5T4J0 391 aa16.34■□□□□ 0.21
ABCF3-214ENST00000480562 FAM69AQ5T7M9 428 aa16.34■□□□□ 0.21
ABCF3-214ENST00000480562 IL17RELQ6ZVW7 336 aa16.34■□□□□ 0.21
ABCF3-214ENST00000480562 FUNDC1Q8IVP5 155 aa16.34■□□□□ 0.21
ABCF3-214ENST00000480562 FAM169BQ8N8A8 192 aa16.34■□□□□ 0.21
ABCF3-214ENST00000480562 OR4F15Q8NGB8 312 aa16.34■□□□□ 0.21
ABCF3-214ENST00000480562 SLC38A4Q969I6 547 aa16.34■□□□□ 0.21
ABCF3-214ENST00000480562 PLK3Q9H4B4 646 aa16.34■□□□□ 0.21
ABCF3-214ENST00000480562 C12orf10Q9HB07 376 aa16.34■□□□□ 0.21
ABCF3-214ENST00000480562 LPAR3Q9UBY5 353 aa16.34■□□□□ 0.21
ABCF3-214ENST00000480562 TRAV36DV7A0A075B6V5 113 aa16.33■□□□□ 0.2
ABCF3-214ENST00000480562 LOC100289279A0A1B0GTE1 492 aa16.33■□□□□ 0.2
ABCF3-214ENST00000480562 LOC390937A0A1W2PQ73 354 aa16.33■□□□□ 0.2
ABCF3-214ENST00000480562 OR2T1O43869 369 aa16.33■□□□□ 0.2
ABCF3-214ENST00000480562 PDE5AO76074 875 aa16.33■□□□□ 0.2
ABCF3-214ENST00000480562 IGKV3-15P01624 115 aa16.33■□□□□ 0.2
ABCF3-214ENST00000480562 ARAFP10398 606 aa16.33■□□□□ 0.2
ABCF3-214ENST00000480562 APEHP13798 732 aaKnown RBP16.33■□□□□ 0.2
ABCF3-214ENST00000480562 HOXB1P14653 301 aaPredicted RBP16.33■□□□□ 0.2
ABCF3-214ENST00000480562 CBR1P16152 277 aa16.33■□□□□ 0.2
ABCF3-214ENST00000480562 THBS4P35443 961 aa16.33■□□□□ 0.2
ABCF3-214ENST00000480562 NPRL3Q12980 569 aa16.33■□□□□ 0.2
ABCF3-214ENST00000480562 IQCCQ4KMZ1 466 aa16.33■□□□□ 0.2
ABCF3-214ENST00000480562 ALG10BQ5I7T1 473 aa16.33■□□□□ 0.2
ABCF3-214ENST00000480562 PHYHD1Q5SRE7 291 aa16.33■□□□□ 0.2
ABCF3-214ENST00000480562 CARD17Q5XLA6 110 aa16.33■□□□□ 0.2
ABCF3-214ENST00000480562 H1FNTQ75WM6 255 aaPredicted RBP16.33■□□□□ 0.2
ABCF3-214ENST00000480562 LSMEM1Q8N8F7 131 aa16.33■□□□□ 0.2
ABCF3-214ENST00000480562 MSI2Q96DH6 328 aaKnown RBP16.33■□□□□ 0.2
ABCF3-214ENST00000480562 OR2M2Q96R28 347 aa16.33■□□□□ 0.2
ABCF3-214ENST00000480562 CRLF2Q9HC73 371 aa16.33■□□□□ 0.2
ABCF3-214ENST00000480562 TCF7L2Q9NQB0 619 aa16.33■□□□□ 0.2
ABCF3-214ENST00000480562 KLHL14Q9P2G3 628 aa16.33■□□□□ 0.2
ABCF3-214ENST00000480562 KCNS2Q9ULS6 477 aa16.33■□□□□ 0.2
ABCF3-214ENST00000480562 SVEP1Q4LDE5 3571 aa16.33■□□□□ 0.2
ABCF3-214ENST00000480562 M0R3G1 203 aa16.32■□□□□ 0.2
ABCF3-214ENST00000480562 POLR3GO15318 223 aaPredicted RBP16.32■□□□□ 0.2
ABCF3-214ENST00000480562 TRAF3IP2O43734 574 aaPredicted RBP16.32■□□□□ 0.2
ABCF3-214ENST00000480562 HPRP00739 348 aa16.32■□□□□ 0.2
ABCF3-214ENST00000480562 HLA-DOBP13765 273 aa16.32■□□□□ 0.2
ABCF3-214ENST00000480562 CAPZA2P47755 286 aa16.32■□□□□ 0.2
ABCF3-214ENST00000480562 CDK6Q00534 326 aa16.32■□□□□ 0.2
ABCF3-214ENST00000480562 PAGE3Q5JUK9 113 aa16.32■□□□□ 0.2
ABCF3-214ENST00000480562 LRIF1Q5T3J3 769 aa16.32■□□□□ 0.2
ABCF3-214ENST00000480562 FAM166AQ6J272 317 aa16.32■□□□□ 0.2
ABCF3-214ENST00000480562 DHRS4L2Q6PKH6 230 aa16.32■□□□□ 0.2
ABCF3-214ENST00000480562 BLOC1S3Q6QNY0 202 aa16.32■□□□□ 0.2
ABCF3-214ENST00000480562 MDP1Q86V88 176 aa16.32■□□□□ 0.2
ABCF3-214ENST00000480562 TMEM123Q8N131 208 aa16.32■□□□□ 0.2
ABCF3-214ENST00000480562 ZCCHC24Q8N2G6 241 aaKnown RBP16.32■□□□□ 0.2
ABCF3-214ENST00000480562 SVOPLQ8N434 492 aa16.32■□□□□ 0.2
ABCF3-214ENST00000480562 ANKK1Q8NFD2 765 aa16.32■□□□□ 0.2
ABCF3-214ENST00000480562 NUP37Q8NFH4 326 aa16.32■□□□□ 0.2
ABCF3-214ENST00000480562 RNF217Q8TC41 542 aa16.32■□□□□ 0.2
ABCF3-214ENST00000480562 DNAJA4Q8WW22 397 aaPredicted RBP16.32■□□□□ 0.2
ABCF3-214ENST00000480562 SPDL1Q96EA4 605 aa16.32■□□□□ 0.2
ABCF3-214ENST00000480562 EBF4Q9BQW3 602 aa16.32■□□□□ 0.2
ABCF3-214ENST00000480562 BPESC1Q9GZL8 116 aa16.32■□□□□ 0.2
ABCF3-214ENST00000480562 MYOZ1Q9NP98 299 aaPredicted RBP16.32■□□□□ 0.2
ABCF3-214ENST00000480562 VAPAQ9P0L0 249 aa16.32■□□□□ 0.2
ABCF3-214ENST00000480562 IGHV2OR16-5A0A0B4J2B6 119 aa16.31■□□□□ 0.2
ABCF3-214ENST00000480562 MS4A18H0YCH9 400 aa16.31■□□□□ 0.2
ABCF3-214ENST00000480562 hCG_2039718K7EN88 272 aa16.31■□□□□ 0.2
ABCF3-214ENST00000480562 MRPL19P49406 292 aaKnown RBP16.31■□□□□ 0.2
ABCF3-214ENST00000480562 IDH3AP50213 366 aa16.31■□□□□ 0.2
ABCF3-214ENST00000480562 PPOXP50336 477 aa16.31■□□□□ 0.2
ABCF3-214ENST00000480562 MS4A18Q3C1V0 323 aa16.31■□□□□ 0.2
ABCF3-214ENST00000480562 REEP3Q6NUK4 255 aa16.31■□□□□ 0.2
ABCF3-214ENST00000480562 C5orf46Q6UWT4 87 aa16.31■□□□□ 0.2
ABCF3-214ENST00000480562 SPATA21Q7Z572 469 aa16.31■□□□□ 0.2
ABCF3-214ENST00000480562 NET1Q7Z628 596 aaPredicted RBP16.31■□□□□ 0.2
ABCF3-214ENST00000480562 UEVLDQ8IX04 471 aa16.31■□□□□ 0.2
ABCF3-214ENST00000480562 PIK3C3Q8NEB9 887 aa16.31■□□□□ 0.2
ABCF3-214ENST00000480562 DOK1Q99704 481 aa16.31■□□□□ 0.2
ABCF3-214ENST00000480562 WFDC6Q9BQY6 131 aa16.31■□□□□ 0.2
ABCF3-214ENST00000480562 EMC6Q9BV81 110 aa16.31■□□□□ 0.2
ABCF3-214ENST00000480562 RAB1BQ9H0U4 201 aa16.31■□□□□ 0.2
ABCF3-214ENST00000480562 IKZF5Q9H5V7 419 aa16.31■□□□□ 0.2
ABCF3-214ENST00000480562 ZNF442Q9H7R0 627 aa16.31■□□□□ 0.2
ABCF3-214ENST00000480562 MOV10Q9HCE1 1003 aaKnown RBP16.31■□□□□ 0.2
ABCF3-214ENST00000480562 SLCO1B3Q9NPD5 702 aa16.31■□□□□ 0.2
ABCF3-214ENST00000480562 CCDC167Q9P0B6 97 aa16.31■□□□□ 0.2
ABCF3-214ENST00000480562 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.3■□□□□ 0.23e-7■■■□□ 15.5
ABCF3-214ENST00000480562 LOC102725191A0A1B0GVB3 256 aa16.3■□□□□ 0.2
ABCF3-214ENST00000480562 SH3PXD2BA1X283 911 aa16.3■□□□□ 0.2
ABCF3-214ENST00000480562 AKAP8O43823 692 aaKnown RBP16.3■□□□□ 0.2
ABCF3-214ENST00000480562 NQO1P15559 274 aaKnown RBP16.3■□□□□ 0.2
ABCF3-214ENST00000480562 NPR2P20594 1047 aa16.3■□□□□ 0.2
ABCF3-214ENST00000480562 AQP1P29972 269 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms