RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 DACH2Q96NX9 599 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 TSPAN32Q96QS1 320 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 NMNAT3Q96T66 252 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 CNN2Q99439 309 aaKnown RBP9.94□□□□□ -0.82
VTI1A-204ENST00000480057 DCUN1D5Q9BTE7 237 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 COL25A1Q9BXS0 654 aaPredicted RBP9.94□□□□□ -0.82
VTI1A-204ENST00000480057 TXNIPQ9H3M7 391 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 PROK2Q9HC23 129 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 KLHL1Q9NR64 748 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 FBXL2Q9UKC9 423 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 ZNF346Q9UL40 294 aaKnown RBP9.94□□□□□ -0.82
VTI1A-204ENST00000480057 STUB1Q9UNE7 303 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 VDAC3Q9Y277 283 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 B3GALT5Q9Y2C3 310 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 MRPS18CQ9Y3D5 142 aaKnown RBP9.94□□□□□ -0.82
VTI1A-204ENST00000480057 HDGFL3Q9Y3E1 203 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 A3GALT2U3KPV4 340 aa9.94□□□□□ -0.82
VTI1A-204ENST00000480057 A0A1W2PNV4 684 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 DAPL1A0PJW8 107 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 OR6C68A6NDL8 312 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 XKRYO14609 159 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 TM4SF5O14894 197 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 MT-ND5P03915 603 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 P04436 131 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 F13BP05160 661 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 ZNF182P17025 639 aaPredicted RBP9.93□□□□□ -0.82
VTI1A-204ENST00000480057 CASRP41180 1078 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 CDKN2AP42771 156 aaKnown RBP9.93□□□□□ -0.82
VTI1A-204ENST00000480057 DAP3P51398 398 aaKnown RBP9.93□□□□□ -0.82
VTI1A-204ENST00000480057 SLC16A1P53985 500 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 VBP1P61758 197 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 ACTA2P62736 377 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 ACTG2P63267 376 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 ATP1A4Q13733 1029 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 GXYLT1Q4G148 440 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 MESTQ5EB52 335 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 DCAF10Q5QP82 559 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 LINC01590Q5TEZ4 76 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 PRAMEF20Q5VT98 475 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 SLC6A19Q695T7 634 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 LEG1Q6P5S2 330 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 SHFQ7M4L6 423 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 LHFPL3Q86UP9 236 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 SYS1Q8N2H4 156 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 OR1J4Q8NGS1 313 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 ZNF417Q8TAU3 575 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 ZNF519Q8TB69 540 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 DYNC2LI1Q8TCX1 351 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 ADAMTS14Q8WXS8 1223 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 SMPDL3BQ92485 455 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 RASD2Q96D21 266 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 NXPE2Q96DL1 559 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 ZHX1-C8orf76Q96EF9 292 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 ZNF587Q96SQ5 575 aaPredicted RBP9.93□□□□□ -0.82
VTI1A-204ENST00000480057 ALG8Q9BVK2 526 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 OR11A1Q9GZK7 315 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 CHST11Q9NPF2 352 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 VSX1Q9NZR4 365 aaPredicted RBP9.93□□□□□ -0.82
VTI1A-204ENST00000480057 SSR3Q9UNL2 185 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 TRAPPC4Q9Y296 219 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 HRH3Q9Y5N1 445 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 FKBP7Q9Y680 259 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 MPDZO75970 2070 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 CPAMD8Q8IZJ3 1885 aa9.93□□□□□ -0.82
VTI1A-204ENST00000480057 PCSK5Q92824 1860 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 LOC102725191A0A1B0GVB3 256 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 A0A1W2PRG6 482 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 RNF13O43567 381 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 EFNA2O43921 213 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 CLPXO76031 633 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 APOL3O95236 402 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 WISP1O95388 367 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 TFPIP10646 304 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 CLUP10909 449 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 IMPDH2P12268 514 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 NR4A1P22736 598 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 DPP4P27487 766 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 SRD5A2P31213 254 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 GABRA5P31644 462 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 PEX19P40855 299 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 CYB561P49447 251 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 SOX8P57073 446 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 NCS1P62166 190 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 PUDPQ08623 228 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 TRAM1Q15629 374 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 ACKR1Q16570 336 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 OR2G6Q5TZ20 316 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 ABHD17BQ5VST6 288 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 EEF1A1P5Q5VTE0 462 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 CD200R1LQ6Q8B3 271 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 TMPRSS7Q7RTY8 843 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 HDDC2Q7Z4H3 204 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 PXKQ7Z7A4 578 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 ZBTB46Q86UZ6 589 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 IL22RA1Q8N6P7 574 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 TMEM99Q8N816 258 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 OR10H4Q8NGA5 316 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 NDNFQ8TB73 568 aa9.92□□□□□ -0.82
VTI1A-204ENST00000480057 SPRYD4Q8WW59 207 aaPredicted RBP9.92□□□□□ -0.82
VTI1A-204ENST00000480057 GATAD2BQ8WXI9 593 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms