RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 SMC2O95347 1197 aa3.82□□□□□ -1.8
RFC4-212ENST00000479307 IGHG3P01860 377 aa3.82□□□□□ -1.8
RFC4-212ENST00000479307 ANXA4P09525 319 aaPredicted RBP3.82□□□□□ -1.8
RFC4-212ENST00000479307 WNT2P09544 360 aa3.82□□□□□ -1.8
RFC4-212ENST00000479307 H2AFZP0C0S5 128 aa3.82□□□□□ -1.8
RFC4-212ENST00000479307 CXCL8P10145 99 aa3.82□□□□□ -1.8
RFC4-212ENST00000479307 BCL3P20749 454 aa3.82□□□□□ -1.8
RFC4-212ENST00000479307 HTR5AP47898 357 aa3.82□□□□□ -1.8
RFC4-212ENST00000479307 EMDP50402 254 aa3.82□□□□□ -1.8
RFC4-212ENST00000479307 LMO4P61968 165 aa3.82□□□□□ -1.8
RFC4-212ENST00000479307 RPS14P62263 151 aaKnown RBP3.82□□□□□ -1.8
RFC4-212ENST00000479307 CTAG1AP78358 180 aa3.82□□□□□ -1.8
RFC4-212ENST00000479307 CDC20Q12834 499 aa3.82□□□□□ -1.8
RFC4-212ENST00000479307 RAB35Q15286 201 aa3.82□□□□□ -1.8
RFC4-212ENST00000479307 CDKN3Q16667 212 aa3.82□□□□□ -1.8
RFC4-212ENST00000479307 HSP90AA5PQ58FG0 334 aa3.82□□□□□ -1.8
RFC4-212ENST00000479307 RNLSQ5VYX0 342 aa3.82□□□□□ -1.8
RFC4-212ENST00000479307 LRRC8BQ6P9F7 803 aa3.82□□□□□ -1.8
RFC4-212ENST00000479307 WASH2PQ6VEQ5 465 aa3.82□□□□□ -1.8
RFC4-212ENST00000479307 EFL1Q7Z2Z2 1120 aaKnown RBP3.82□□□□□ -1.8
RFC4-212ENST00000479307 PDCL2Q8N4E4 241 aa3.82□□□□□ -1.8
RFC4-212ENST00000479307 OR2T34Q8NGX1 318 aa3.82□□□□□ -1.8
RFC4-212ENST00000479307 SELENOMQ8WWX9 145 aa3.82□□□□□ -1.8
RFC4-212ENST00000479307 SH3GL1Q99961 368 aa3.82□□□□□ -1.8
RFC4-212ENST00000479307 LPAR2Q9HBW0 351 aa3.82□□□□□ -1.8
RFC4-212ENST00000479307 TIGARQ9NQ88 270 aa3.82□□□□□ -1.8
RFC4-212ENST00000479307 FAM120CQ9NX05 1096 aaKnown RBP3.82□□□□□ -1.8
RFC4-212ENST00000479307 IL20Q9NYY1 176 aa3.82□□□□□ -1.8
RFC4-212ENST00000479307 DHRS4-AS1Q9P1J3 65 aa3.82□□□□□ -1.8
RFC4-212ENST00000479307 ARMCX1Q9P291 453 aa3.82□□□□□ -1.8
RFC4-212ENST00000479307 GALPQ9UBC7 116 aa3.82□□□□□ -1.8
RFC4-212ENST00000479307 PISDQ9UG56 409 aa3.82□□□□□ -1.8
RFC4-212ENST00000479307 TBK1Q9UHD2 729 aa3.82□□□□□ -1.8
RFC4-212ENST00000479307 ATP6V1HQ9UI12 483 aa3.82□□□□□ -1.8
RFC4-212ENST00000479307 SCML1Q9UN30 329 aa3.82□□□□□ -1.8
RFC4-212ENST00000479307 EIF3LQ9Y262 564 aaKnown RBP3.82□□□□□ -1.8
RFC4-212ENST00000479307 NOSIPQ9Y314 301 aaKnown RBP3.82□□□□□ -1.8
RFC4-212ENST00000479307 KMT2CQ8NEZ4 4911 aaKnown RBP3.82□□□□□ -1.8
RFC4-212ENST00000479307 POLEQ07864 2286 aa3.81□□□□□ -1.8
RFC4-212ENST00000479307 ATP8B3O60423 1300 aa3.81□□□□□ -1.8
RFC4-212ENST00000479307 TRAV9-2A0A087WT02 112 aa3.81□□□□□ -1.8
RFC4-212ENST00000479307 A0A087WWV3 80 aa3.81□□□□□ -1.8
RFC4-212ENST00000479307 UQCRHLA0A096LP55 91 aa3.81□□□□□ -1.8
RFC4-212ENST00000479307 RGSL1A5PLK6 1076 aa3.81□□□□□ -1.8
RFC4-212ENST00000479307 FAM47DPA6NHR8 397 aa3.81□□□□□ -1.8
RFC4-212ENST00000479307 D6RAR5 112 aa3.81□□□□□ -1.8
RFC4-212ENST00000479307 H0YL77 283 aa3.81□□□□□ -1.8
RFC4-212ENST00000479307 MKRN2OSH3BPM6 223 aa3.81□□□□□ -1.8
RFC4-212ENST00000479307 COCHO43405 550 aa3.81□□□□□ -1.8
RFC4-212ENST00000479307 DUX1O43812 170 aa3.81□□□□□ -1.8
RFC4-212ENST00000479307 NEMFO60524 1076 aa3.81□□□□□ -1.8
RFC4-212ENST00000479307 SRPX2O60687 465 aaPredicted RBP3.81□□□□□ -1.8
RFC4-212ENST00000479307 ZNF354AO60765 605 aaPredicted RBP3.81□□□□□ -1.8
RFC4-212ENST00000479307 ZNF253O75346 499 aa3.81□□□□□ -1.8
RFC4-212ENST00000479307 UQCRHP07919 91 aa3.81□□□□□ -1.8
RFC4-212ENST00000479307 THRBP10828 461 aa3.81□□□□□ -1.8
RFC4-212ENST00000479307 SPAG1Q07617 926 aa3.81□□□□□ -1.8
RFC4-212ENST00000479307 LTB4RQ15722 352 aa3.81□□□□□ -1.8
RFC4-212ENST00000479307 ADPRMQ3LIE5 342 aa3.81□□□□□ -1.8
RFC4-212ENST00000479307 EIPR1Q53HC9 387 aa3.81□□□□□ -1.8
RFC4-212ENST00000479307 PRR30Q53SZ7 412 aaPredicted RBP3.81□□□□□ -1.8
RFC4-212ENST00000479307 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
RFC4-212ENST00000479307 WSCD1Q658N2 575 aa3.81□□□□□ -1.8
RFC4-212ENST00000479307 SASS6Q6UVJ0 657 aa3.81□□□□□ -1.8
RFC4-212ENST00000479307 HACD2Q6Y1H2 254 aa3.81□□□□□ -1.8
RFC4-212ENST00000479307 P2RY8Q86VZ1 359 aa3.81□□□□□ -1.8
RFC4-212ENST00000479307 CCDC148Q8NFR7 591 aa3.81□□□□□ -1.8
RFC4-212ENST00000479307 SUN5Q8TC36 379 aa3.81□□□□□ -1.8
RFC4-212ENST00000479307 BRSK1Q8TDC3 778 aa3.81□□□□□ -1.8
RFC4-212ENST00000479307 VN1R17PQ8TDU5 208 aa3.81□□□□□ -1.8
RFC4-212ENST00000479307 TFB1MQ8WVM0 346 aaKnown RBP3.81□□□□□ -1.8
RFC4-212ENST00000479307 NAT6Q93015 286 aa3.81□□□□□ -1.8
RFC4-212ENST00000479307 TMEM159Q96B96 161 aa3.81□□□□□ -1.8
RFC4-212ENST00000479307 DNAJA3Q96EY1 480 aa3.81□□□□□ -1.8
RFC4-212ENST00000479307 PIWIL1Q96J94 861 aaKnown RBP3.81□□□□□ -1.8
RFC4-212ENST00000479307 ELMO2Q96JJ3 720 aa3.81□□□□□ -1.8
RFC4-212ENST00000479307 MCCC1Q96RQ3 725 aaPredicted RBP3.81□□□□□ -1.8
RFC4-212ENST00000479307 GPA33Q99795 319 aa3.81□□□□□ -1.8
RFC4-212ENST00000479307 ACBD6Q9BR61 282 aa3.81□□□□□ -1.8
RFC4-212ENST00000479307 SLC7A5P2Q9GIP4 190 aa3.81□□□□□ -1.8
RFC4-212ENST00000479307 COG4Q9H9E3 785 aa3.81□□□□□ -1.8
RFC4-212ENST00000479307 ELOVL2Q9NXB9 296 aa3.81□□□□□ -1.8
RFC4-212ENST00000479307 CHMP5Q9NZZ3 219 aa3.81□□□□□ -1.8
RFC4-212ENST00000479307 MEGF8Q7Z7M0 2845 aa3.81□□□□□ -1.8
RFC4-212ENST00000479307 PKD1L1Q8TDX9 2849 aa3.8□□□□□ -1.8
RFC4-212ENST00000479307 A0A087WZY1 265 aa3.8□□□□□ -1.8
RFC4-212ENST00000479307 WASHC1A8K0Z3 465 aa3.8□□□□□ -1.8
RFC4-212ENST00000479307 M0QX08 132 aa3.8□□□□□ -1.8
RFC4-212ENST00000479307 TM9SF1O15321 606 aa3.8□□□□□ -1.8
RFC4-212ENST00000479307 LCMT2O60294 686 aaKnown RBP3.8□□□□□ -1.8
RFC4-212ENST00000479307 KRT6BP04259 564 aa3.8□□□□□ -1.8
RFC4-212ENST00000479307 UQCRBP14927 111 aa3.8□□□□□ -1.8
RFC4-212ENST00000479307 TNNI3P19429 210 aa3.8□□□□□ -1.8
RFC4-212ENST00000479307 CD9P21926 228 aa3.8□□□□□ -1.8
RFC4-212ENST00000479307 NUDT1P36639 197 aa3.8□□□□□ -1.8
RFC4-212ENST00000479307 KRT6CP48668 564 aa3.8□□□□□ -1.8
RFC4-212ENST00000479307 ARHGDIBP52566 201 aa3.8□□□□□ -1.8
RFC4-212ENST00000479307 EXOSC2Q13868 293 aaKnown RBP3.8□□□□□ -1.8
RFC4-212ENST00000479307 BOLA3Q53S33 107 aa3.8□□□□□ -1.8
RFC4-212ENST00000479307 LCE1EQ5T753 118 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms