RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 IQCCQ4KMZ1 466 aa11.25□□□□□ -0.61
ABCF3-212ENST00000478288 UGT2A3Q6UWM9 527 aa11.25□□□□□ -0.61
ABCF3-212ENST00000478288 TMEM123Q8N131 208 aa11.25□□□□□ -0.61
ABCF3-212ENST00000478288 OR6S1Q8NH40 331 aa11.25□□□□□ -0.61
ABCF3-212ENST00000478288 DNAJA4Q8WW22 397 aaPredicted RBP11.25□□□□□ -0.61
ABCF3-212ENST00000478288 GTF2H4Q92759 462 aa11.25□□□□□ -0.61
ABCF3-212ENST00000478288 SLC38A4Q969I6 547 aa11.25□□□□□ -0.61
ABCF3-212ENST00000478288 C1orf159Q96HA4 380 aa11.25□□□□□ -0.61
ABCF3-212ENST00000478288 DOK1Q99704 481 aa11.25□□□□□ -0.61
ABCF3-212ENST00000478288 CENPHQ9H3R5 247 aa11.25□□□□□ -0.61
ABCF3-212ENST00000478288 SEC61A2Q9H9S3 476 aa11.25□□□□□ -0.61
ABCF3-212ENST00000478288 GPR35Q9HC97 309 aa11.25□□□□□ -0.61
ABCF3-212ENST00000478288 RAB21Q9UL25 225 aa11.25□□□□□ -0.61
ABCF3-212ENST00000478288 USP22Q9UPT9 525 aa11.25□□□□□ -0.61
ABCF3-212ENST00000478288 IGHV2OR16-5A0A0B4J2B6 119 aa11.24□□□□□ -0.61
ABCF3-212ENST00000478288 TMEM120BA0PK00 339 aa11.24□□□□□ -0.61
ABCF3-212ENST00000478288 TRAF3IP2O43734 574 aaPredicted RBP11.24□□□□□ -0.61
ABCF3-212ENST00000478288 TGFAP01135 160 aa11.24□□□□□ -0.61
ABCF3-212ENST00000478288 DAOP14920 347 aa11.24□□□□□ -0.61
ABCF3-212ENST00000478288 HOXB9P17482 250 aaPredicted RBP11.24□□□□□ -0.61
ABCF3-212ENST00000478288 THBS4P35443 961 aa11.24□□□□□ -0.61
ABCF3-212ENST00000478288 EVX1P49640 407 aa11.24□□□□□ -0.61
ABCF3-212ENST00000478288 CHN2P52757 468 aa11.24□□□□□ -0.61
ABCF3-212ENST00000478288 TUBA1BP68363 451 aa11.24□□□□□ -0.61
ABCF3-212ENST00000478288 TUBA4AP68366 448 aa11.24□□□□□ -0.61
ABCF3-212ENST00000478288 ARF1P84077 181 aaKnown RBP11.24□□□□□ -0.61
ABCF3-212ENST00000478288 GTDC1Q4AE62 458 aa11.24□□□□□ -0.61
ABCF3-212ENST00000478288 SLC9B1Q4ZJI4 515 aa11.24□□□□□ -0.61
ABCF3-212ENST00000478288 C6orf10Q5SRN2 563 aa11.24□□□□□ -0.61
ABCF3-212ENST00000478288 FAM91A1Q658Y4 838 aa11.24□□□□□ -0.61
ABCF3-212ENST00000478288 NXNQ6DKJ4 435 aa11.24□□□□□ -0.61
ABCF3-212ENST00000478288 VHLLQ6RSH7 139 aa11.24□□□□□ -0.61
ABCF3-212ENST00000478288 TUBA1AQ71U36 451 aa11.24□□□□□ -0.61
ABCF3-212ENST00000478288 H1FNTQ75WM6 255 aaPredicted RBP11.24□□□□□ -0.61
ABCF3-212ENST00000478288 ZNF627Q7L945 461 aa11.24□□□□□ -0.61
ABCF3-212ENST00000478288 MYPOPQ86VE0 399 aaPredicted RBP11.24□□□□□ -0.61
ABCF3-212ENST00000478288 MIER2Q8N344 545 aa11.24□□□□□ -0.61
ABCF3-212ENST00000478288 ZNF786Q8N393 782 aa11.24□□□□□ -0.61
ABCF3-212ENST00000478288 GPR137CQ8N3F9 429 aa11.24□□□□□ -0.61
ABCF3-212ENST00000478288 RFLNBQ8N5W9 214 aa11.24□□□□□ -0.61
ABCF3-212ENST00000478288 SLC25A36Q96CQ1 311 aa11.24□□□□□ -0.61
ABCF3-212ENST00000478288 LRR1Q96L50 414 aa11.24□□□□□ -0.61
ABCF3-212ENST00000478288 OR2M2Q96R28 347 aa11.24□□□□□ -0.61
ABCF3-212ENST00000478288 PARD6BQ9BYG5 372 aa11.24□□□□□ -0.61
ABCF3-212ENST00000478288 DENND2DQ9H6A0 471 aaPredicted RBP11.24□□□□□ -0.61
ABCF3-212ENST00000478288 CRLF2Q9HC73 371 aa11.24□□□□□ -0.61
ABCF3-212ENST00000478288 RPS6KB2Q9UBS0 482 aa11.24□□□□□ -0.61
ABCF3-212ENST00000478288 CORINQ9Y5Q5 1042 aa11.24□□□□□ -0.61
ABCF3-212ENST00000478288 GMEB1Q9Y692 573 aa11.24□□□□□ -0.61
ABCF3-212ENST00000478288 IGKV1D-42A0A075B6H8 117 aa11.23□□□□□ -0.61
ABCF3-212ENST00000478288 TRAV36DV7A0A075B6V5 113 aa11.23□□□□□ -0.61
ABCF3-212ENST00000478288 TMEM129A0AVI4 362 aa11.23□□□□□ -0.61
ABCF3-212ENST00000478288 M0R082 166 aa11.23□□□□□ -0.61
ABCF3-212ENST00000478288 CLIC1O00299 241 aa11.23□□□□□ -0.61
ABCF3-212ENST00000478288 UBDO15205 165 aa11.23□□□□□ -0.61
ABCF3-212ENST00000478288 CELA3BP08861 270 aa11.23□□□□□ -0.61
ABCF3-212ENST00000478288 KITP10721 976 aa11.23□□□□□ -0.61
ABCF3-212ENST00000478288 RIN1Q13671 783 aa11.23□□□□□ -0.61
ABCF3-212ENST00000478288 C1DQ13901 141 aaKnown RBP11.23□□□□□ -0.61
ABCF3-212ENST00000478288 CARTPTQ16568 116 aa11.23□□□□□ -0.61
ABCF3-212ENST00000478288 CR1LQ2VPA4 569 aa11.23□□□□□ -0.61
ABCF3-212ENST00000478288 CEACAM16Q2WEN9 425 aa11.23□□□□□ -0.61
ABCF3-212ENST00000478288 ULK3Q6PHR2 472 aa11.23□□□□□ -0.61
ABCF3-212ENST00000478288 DHRS4L2Q6PKH6 230 aa11.23□□□□□ -0.61
ABCF3-212ENST00000478288 MAVSQ7Z434 540 aa11.23□□□□□ -0.61
ABCF3-212ENST00000478288 KDM8Q8N371 416 aa11.23□□□□□ -0.61
ABCF3-212ENST00000478288 ANKRD42Q8N9B4 389 aa11.23□□□□□ -0.61
ABCF3-212ENST00000478288 SCAIQ8N9R8 606 aa11.23□□□□□ -0.61
ABCF3-212ENST00000478288 OR9I1Q8NGQ6 314 aa11.23□□□□□ -0.61
ABCF3-212ENST00000478288 ZNF417Q8TAU3 575 aa11.23□□□□□ -0.61
ABCF3-212ENST00000478288 MAL2Q969L2 176 aa11.23□□□□□ -0.61
ABCF3-212ENST00000478288 TAAR8Q969N4 342 aa11.23□□□□□ -0.61
ABCF3-212ENST00000478288 SLC41A3Q96GZ6 507 aa11.23□□□□□ -0.61
ABCF3-212ENST00000478288 ZNF587Q96SQ5 575 aaPredicted RBP11.23□□□□□ -0.61
ABCF3-212ENST00000478288 PAIP1Q9H074 479 aaKnown RBP11.23□□□□□ -0.61
ABCF3-212ENST00000478288 EVA1AQ9H8M9 152 aa11.23□□□□□ -0.61
ABCF3-212ENST00000478288 NOX3Q9HBY0 568 aa11.23□□□□□ -0.61
ABCF3-212ENST00000478288 B3GNT2Q9NY97 397 aa11.23□□□□□ -0.61
ABCF3-212ENST00000478288 KLHL14Q9P2G3 628 aa11.23□□□□□ -0.61
ABCF3-212ENST00000478288 SEC14L4Q9UDX3 406 aa11.23□□□□□ -0.61
ABCF3-212ENST00000478288 TESQ9UGI8 421 aaKnown RBP11.23□□□□□ -0.61
ABCF3-212ENST00000478288 A0A1B0GWA3 101 aa11.22□□□□□ -0.61
ABCF3-212ENST00000478288 ZNF503-AS2A6NEH8 195 aa11.22□□□□□ -0.61
ABCF3-212ENST00000478288 C5orf58C9J3I9 102 aa11.22□□□□□ -0.61
ABCF3-212ENST00000478288 LILRA1O75019 489 aa11.22□□□□□ -0.61
ABCF3-212ENST00000478288 NUDT7P0C024 238 aa11.22□□□□□ -0.61
ABCF3-212ENST00000478288 ARAFP10398 606 aa11.22□□□□□ -0.61
ABCF3-212ENST00000478288 PCMT1P22061 227 aa11.22□□□□□ -0.61
ABCF3-212ENST00000478288 NR4A1P22736 598 aa11.22□□□□□ -0.61
ABCF3-212ENST00000478288 HTR2AP28223 471 aa11.22□□□□□ -0.61
ABCF3-212ENST00000478288 GRPRP30550 384 aa11.22□□□□□ -0.61
ABCF3-212ENST00000478288 CDH15P55291 814 aa11.22□□□□□ -0.61
ABCF3-212ENST00000478288 HOXC5Q00444 222 aa11.22□□□□□ -0.61
ABCF3-212ENST00000478288 SNTB2Q13425 540 aaKnown RBP11.22□□□□□ -0.61
ABCF3-212ENST00000478288 DAG1Q14118 895 aa11.22□□□□□ -0.61
ABCF3-212ENST00000478288 MGAM2Q2M2H8 2515 aa11.22□□□□□ -0.61
ABCF3-212ENST00000478288 ALG10BQ5I7T1 473 aa11.22□□□□□ -0.61
ABCF3-212ENST00000478288 LRIF1Q5T3J3 769 aa11.22□□□□□ -0.61
ABCF3-212ENST00000478288 SWT1Q5T5J6 900 aaKnown RBP11.22□□□□□ -0.61
ABCF3-212ENST00000478288 LIPNQ5VXI9 398 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms