RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 ASB15Q8WXK1 588 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 TM9SF4Q92544 642 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 THRSPQ92748 146 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 TAAR8Q969N4 342 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 KTI12Q96EK9 354 aaPredicted RBP7.19□□□□□ -1.26
VMA21-203ENST00000477649 MOGAT1Q96PD6 335 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 EDEM2Q9BV94 578 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 PTDSS2Q9BVG9 487 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 CDADC1Q9BWV3 514 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 IRF2BPLQ9H1B7 796 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 TXNIPQ9H3M7 391 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 SACM1LQ9NTJ5 587 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 TXNL4BQ9NX01 149 aaKnown RBP7.19□□□□□ -1.26
VMA21-203ENST00000477649 PISDQ9UG56 409 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 FARSAQ9Y285 508 aaKnown RBP7.19□□□□□ -1.26
VMA21-203ENST00000477649 UGT2A1Q9Y4X1 527 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 FKBP7Q9Y680 259 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 SPTBP11277 2137 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 ASXL3Q9C0F0 2248 aa7.19□□□□□ -1.26
VMA21-203ENST00000477649 TEX13CA0A0J9YWL9 993 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 TMEM72A0PK05 275 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 SLC35F4A4IF30 521 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 FTCDNL1E5RQL4 147 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 PLPP3O14495 311 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 ITGA10O75578 1167 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 GATBO75879 557 aaKnown RBP7.18□□□□□ -1.26
VMA21-203ENST00000477649 SULT1C4O75897 302 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 RGS9O75916 674 aaPredicted RBP7.18□□□□□ -1.26
VMA21-203ENST00000477649 MT-CO3P00414 261 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 NR2C1P13056 603 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 CELP19835 753 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 PTNP21246 168 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 CRABP1P29762 137 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 OPRL1P41146 370 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 CASP3P42574 277 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 RPS5P46782 204 aaKnown RBP7.18□□□□□ -1.26
VMA21-203ENST00000477649 TGM4P49221 684 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 MTNR1BP49286 362 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 MLF1P58340 268 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 RPL27P61353 136 aaKnown RBP7.18□□□□□ -1.26
VMA21-203ENST00000477649 LTBQ06643 244 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 EGR3Q06889 387 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 SELENBP1Q13228 472 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 CSRP2Q16527 193 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 ZNF239Q16600 458 aaKnown RBP7.18□□□□□ -1.26
VMA21-203ENST00000477649 CRTC2Q53ET0 693 aaPredicted RBP7.18□□□□□ -1.26
VMA21-203ENST00000477649 SPANXN2Q5MJ10 180 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 EEF1A1P5Q5VTE0 462 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 TCEAL6Q6IPX3 200 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 ZNF544Q6NX49 715 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 C3orf33Q6P1S2 294 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 RPL22L1Q6P5R6 122 aaKnown RBP7.18□□□□□ -1.26
VMA21-203ENST00000477649 LEG1Q6P5S2 330 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 PAQR6Q6TCH4 344 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 H1FNTQ75WM6 255 aaPredicted RBP7.18□□□□□ -1.26
VMA21-203ENST00000477649 VASH1Q7L8A9 365 aaPredicted RBP7.18□□□□□ -1.26
VMA21-203ENST00000477649 RPS19BP1Q86WX3 136 aaKnown RBP7.18□□□□□ -1.26
VMA21-203ENST00000477649 RAB43Q86YS6 212 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 KLBQ86Z14 1044 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 SLC35F2Q8IXU6 374 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 EXD3Q8N9H8 876 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 CYB561A3Q8NBI2 242 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 LSM14AQ8ND56 463 aaKnown RBP7.18□□□□□ -1.26
VMA21-203ENST00000477649 SDR9C7Q8NEX9 313 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 OR2M3Q8NG83 312 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 OR11G2Q8NGC1 345 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 OR4K17Q8NGC6 315 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 PAQR8Q8TEZ7 354 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 ASB17Q8WXJ9 295 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 THAP4Q8WY91 577 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 ACOT12Q8WYK0 555 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 ATOH1Q92858 354 aaPredicted RBP7.18□□□□□ -1.26
VMA21-203ENST00000477649 TCEAL3Q969E4 200 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 SLC25A46Q96AG3 418 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 C8orf44Q96CB5 159 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 NTNG2Q96CW9 530 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 NXPE2Q96DL1 559 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 CEP19Q96LK0 163 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 Q96M85 177 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 WDFY2Q96P53 400 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 NMNAT3Q96T66 252 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 ALG12Q9BV10 488 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 HCAR1Q9BXC0 346 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 ANGPTL4Q9BY76 406 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 RTN4RQ9BZR6 473 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 SPRY4Q9C004 299 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 MED20Q9H944 212 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 MARCH7Q9H992 704 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 ALKBH4Q9NXW9 302 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 TAS2R5Q9NYW4 299 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 VSX1Q9NZR4 365 aaPredicted RBP7.18□□□□□ -1.26
VMA21-203ENST00000477649 TCFL5Q9UL49 500 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 TRAPPC4Q9Y296 219 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 HDGFL3Q9Y3E1 203 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 ADAM18Q9Y3Q7 739 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 SCN2AQ99250 2005 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 SEC16AO15027 2179 aa7.18□□□□□ -1.26
VMA21-203ENST00000477649 DMDP11532 3685 aa7.17□□□□□ -1.26
VMA21-203ENST00000477649 LOC102725191A0A1B0GVB3 256 aa7.17□□□□□ -1.26
VMA21-203ENST00000477649 A0A1W2PNV4 684 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms