RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 OBP2AQ9NY56 170 aa11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 NKIRAS2Q9NYR9 191 aa11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 YARS2Q9Y2Z4 477 aaKnown RBP11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 ATG4BQ9Y4P1 393 aa11.65□□□□□ -0.54
RTFDC1-207ENST00000477573 CHD9Q3L8U1 2897 aa11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 ARRDC5A6NEK1 342 aa11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 ZNF705EA8MWA4 302 aaPredicted RBP11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 OR7A17O14581 309 aa11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 CDC14BO60729 498 aa11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 FARS2O95363 451 aaKnown RBP11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 C1SP09871 688 aa11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 ANKRD34CP0C6C1 535 aa11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 THEGLP0DJG4 465 aa11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 VIPR2P41587 438 aa11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 LUMP51884 338 aaPredicted RBP11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 CRISP1P54107 249 aa11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 SRSF5Q13243 272 aaKnown RBP11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 TRA2AQ13595 282 aaKnown RBP eCLIP11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 SHHQ15465 462 aa11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 FAM174BQ3ZCQ3 159 aa11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 FAM78AQ5JUQ0 283 aa11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 ADAM5Q6NVV9 412 aa11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 NHLRC1Q6VVB1 395 aa11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 UBE3DQ7Z6J8 389 aa11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 VTCN1Q7Z7D3 282 aa11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 SORCS1Q8WY21 1168 aa11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 LRRC3BQ96PB8 259 aa11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 DPH2Q9BQC3 489 aaPredicted RBP11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 SEMA4BQ9NPR2 832 aaPredicted RBP11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 DEC1Q9P2X7 70 aa11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 PCTPQ9UKL6 214 aa11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 GPR55Q9Y2T6 319 aaPredicted RBP11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 KPTNQ9Y664 436 aa11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 TCRBV21S2A2A0A5A6 115 aa11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 ZNF587BE7ETH6 402 aa11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 MFNGO00587 321 aa11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 PPP1R2P9O14990 202 aa11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 PPBPP02775 128 aa11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 CNR2P34972 360 aa11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 RAD52P43351 418 aa11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 PDGFRLQ15198 375 aa11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 RBBP7Q16576 425 aa11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 VMACQ2NL98 169 aa11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 EIF5AL1Q6IS14 154 aaKnown RBP11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 MARCH9Q86YJ5 346 aa11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 LGI4Q8N135 537 aa11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 C10orf53Q8N6V4 93 aa11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 SAMD12Q8N8I0 201 aa11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 BOLLQ8N9W6 283 aaKnown RBP11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 NIPSNAP1Q9BPW8 284 aa11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 SLC6A16Q9GZN6 736 aa11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 METTL8Q9H825 291 aaKnown RBP11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 ASB6Q9NWX5 421 aa11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 OARD1Q9Y530 152 aa11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 PRSS21Q9Y6M0 314 aa11.64□□□□□ -0.55
RTFDC1-207ENST00000477573 PIKFYVEQ9Y2I7 2098 aa11.63□□□□□ -0.55
RTFDC1-207ENST00000477573 IGLV3-16A0A075B6K0 115 aa11.63□□□□□ -0.55
RTFDC1-207ENST00000477573 GGT3PA6NGU5 568 aa11.63□□□□□ -0.55
RTFDC1-207ENST00000477573 LRRC14BA6NHZ5 514 aa11.63□□□□□ -0.55
RTFDC1-207ENST00000477573 TLR4O00206 839 aa11.63□□□□□ -0.55
RTFDC1-207ENST00000477573 ARPC1BO15143 372 aaKnown RBP11.63□□□□□ -0.55
RTFDC1-207ENST00000477573 FFAR2O15552 330 aa11.63□□□□□ -0.55
RTFDC1-207ENST00000477573 RGS14O43566 566 aa11.63□□□□□ -0.55
RTFDC1-207ENST00000477573 REM1O75628 298 aa11.63□□□□□ -0.55
RTFDC1-207ENST00000477573 NCR1O76036 304 aa11.63□□□□□ -0.55
RTFDC1-207ENST00000477573 PRNPP04156 253 aa11.63□□□□□ -0.55
RTFDC1-207ENST00000477573 SFTPBP07988 381 aa11.63□□□□□ -0.55
RTFDC1-207ENST00000477573 CHI3L1P36222 383 aaPredicted RBP11.63□□□□□ -0.55
RTFDC1-207ENST00000477573 INSM1Q01101 510 aaPredicted RBP11.63□□□□□ -0.55
RTFDC1-207ENST00000477573 VEZF1Q14119 521 aa11.63□□□□□ -0.55
RTFDC1-207ENST00000477573 PCBP2Q15366 365 aaKnown RBP eCLIP11.63□□□□□ -0.55
RTFDC1-207ENST00000477573 SBSNQ6UWP8 590 aa11.63□□□□□ -0.55
RTFDC1-207ENST00000477573 ZNF546Q86UE3 836 aa11.63□□□□□ -0.55
RTFDC1-207ENST00000477573 GTPBP8Q8N3Z3 284 aaPredicted RBP11.63□□□□□ -0.55
RTFDC1-207ENST00000477573 OR51S1Q8NGJ8 323 aa11.63□□□□□ -0.55
RTFDC1-207ENST00000477573 M1APQ8TC57 530 aa11.63□□□□□ -0.55
RTFDC1-207ENST00000477573 HAVCR2Q8TDQ0 301 aa11.63□□□□□ -0.55
RTFDC1-207ENST00000477573 FGF13Q92913 245 aa11.63□□□□□ -0.55
RTFDC1-207ENST00000477573 TIFAQ96CG3 184 aa11.63□□□□□ -0.55
RTFDC1-207ENST00000477573 SMIM8Q96KF7 97 aa11.63□□□□□ -0.55
RTFDC1-207ENST00000477573 TSSK6Q9BXA6 273 aa11.63□□□□□ -0.55
RTFDC1-207ENST00000477573 SLC26A1Q9H2B4 701 aa11.63□□□□□ -0.55
RTFDC1-207ENST00000477573 RPS10P5Q9NQ39 176 aa11.63□□□□□ -0.55
RTFDC1-207ENST00000477573 DOK5Q9P104 306 aa11.63□□□□□ -0.55
RTFDC1-207ENST00000477573 OR14J1Q9UGF5 321 aa11.63□□□□□ -0.55
RTFDC1-207ENST00000477573 MSRAQ9UJ68 235 aa11.63□□□□□ -0.55
RTFDC1-207ENST00000477573 KCND3Q9UK17 655 aa11.63□□□□□ -0.55
RTFDC1-207ENST00000477573 RPH3ALQ9UNE2 315 aa11.63□□□□□ -0.55
RTFDC1-207ENST00000477573 GTF2A1LQ9UNN4 478 aa11.63□□□□□ -0.55
RTFDC1-207ENST00000477573 YBX2Q9Y2T7 364 aaKnown RBP11.63□□□□□ -0.55
RTFDC1-207ENST00000477573 hCG_1809904A0A1W2PP81 198 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 A0A1W2PR64 198 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 A0A1W2PRV1 198 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 ANHXE9PGG2 379 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 GABRPO00591 440 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 DVL1O14640 695 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 SOX15O60248 233 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 HOXB9P17482 250 aaPredicted RBP11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 AGTR2P50052 363 aa11.62□□□□□ -0.55
RTFDC1-207ENST00000477573 H2BFSP57053 126 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms