RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 A0A0G2JNJ9 132 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 UNC119BA6NIH7 251 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 C11orf98E9PRG8 122 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 BLOC1S5-TXNDC5H3BN57 136 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 PLPP3O14495 311 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 SS18L1O75177 396 aaPredicted RBP13.64□□□□□ -0.23
SEC13-215ENST00000477547 SERPINI2O75830 405 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 VAMP5O95183 116 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 RCBTB2O95199 551 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 BAG2O95816 211 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 HPRP00739 348 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 ADAP00813 363 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 POU2F1P14859 743 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 AGTR1P30556 359 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 UQCRC1P31930 480 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 CEACAM8P31997 349 aaPredicted RBP13.64□□□□□ -0.23
SEC13-215ENST00000477547 GSSP48637 474 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 SLC16A1P53985 500 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 RIPPLY3P57055 190 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 POU3F1Q03052 451 aaPredicted RBP13.64□□□□□ -0.23
SEC13-215ENST00000477547 POU4F3Q15319 338 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 EEF1A1P5Q5VTE0 462 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 HIPK1Q86Z02 1210 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 UEVLDQ8IX04 471 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 KDM8Q8N371 416 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 CNEP1R1Q8N9A8 125 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 OR51A7Q8NH64 312 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 GTPBP3Q969Y2 492 aaKnown RBP13.64□□□□□ -0.23
SEC13-215ENST00000477547 NRBF2Q96F24 287 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 GPA33Q99795 319 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 TACO1Q9BSH4 297 aaKnown RBP13.64□□□□□ -0.23
SEC13-215ENST00000477547 SF3B5Q9BWJ5 86 aaKnown RBP13.64□□□□□ -0.23
SEC13-215ENST00000477547 NDEL1Q9GZM8 345 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 BCO1Q9HAY6 547 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 GP6Q9HCN6 339 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 GLRX2Q9NS18 164 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 B3GAT1Q9P2W7 334 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 Q9UFV3 132 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 ING1Q9UK53 422 aaPredicted RBP13.64□□□□□ -0.23
SEC13-215ENST00000477547 OAZ3Q9UMX2 235 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 MGAT4BQ9UQ53 548 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 SLC5A6Q9Y289 635 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 EMC9Q9Y3B6 208 aa13.64□□□□□ -0.23
SEC13-215ENST00000477547 MAGED1Q9Y5V3 778 aaPredicted RBP13.64□□□□□ -0.23
SEC13-215ENST00000477547 IGKV3D-15A0A087WSY6 115 aa13.63□□□□□ -0.23
SEC13-215ENST00000477547 HSPB2A8KAH6 182 aa13.63□□□□□ -0.23
SEC13-215ENST00000477547 G3V2T6 193 aa13.63□□□□□ -0.23
SEC13-215ENST00000477547 RNF13O43567 381 aa13.63□□□□□ -0.23
SEC13-215ENST00000477547 AHCYP23526 432 aa13.63□□□□□ -0.23
SEC13-215ENST00000477547 AQP2P41181 271 aa13.63□□□□□ -0.23
SEC13-215ENST00000477547 ADORA2A-AS1P86434 159 aa13.63□□□□□ -0.23
SEC13-215ENST00000477547 FOXF2Q12947 444 aa13.63□□□□□ -0.23
SEC13-215ENST00000477547 TSPAN31Q12999 210 aa13.63□□□□□ -0.23
SEC13-215ENST00000477547 C1DQ13901 141 aaKnown RBP13.63□□□□□ -0.23
SEC13-215ENST00000477547 SLC17A1Q14916 467 aa13.63□□□□□ -0.23
SEC13-215ENST00000477547 PDK3Q15120 406 aa13.63□□□□□ -0.23
SEC13-215ENST00000477547 HSPB2Q16082 182 aa13.63□□□□□ -0.23
SEC13-215ENST00000477547 ANKDD1AQ495B1 522 aa13.63□□□□□ -0.23
SEC13-215ENST00000477547 ZBED5Q49AG3 693 aa13.63□□□□□ -0.23
SEC13-215ENST00000477547 TMEM201Q5SNT2 666 aa13.63□□□□□ -0.23
SEC13-215ENST00000477547 ZNF620Q6ZNG0 422 aa13.63□□□□□ -0.23
SEC13-215ENST00000477547 ZDHHC13Q8IUH4 622 aa13.63□□□□□ -0.23
SEC13-215ENST00000477547 EPHX4Q8IUS5 362 aa13.63□□□□□ -0.23
SEC13-215ENST00000477547 ATG16L2Q8NAA4 619 aa13.63□□□□□ -0.23
SEC13-215ENST00000477547 ANKK1Q8NFD2 765 aa13.63□□□□□ -0.23
SEC13-215ENST00000477547 MOSPD2Q8NHP6 518 aa13.63□□□□□ -0.23
SEC13-215ENST00000477547 OXGR1Q96P68 337 aa13.63□□□□□ -0.23
SEC13-215ENST00000477547 FEVQ99581 238 aa13.63□□□□□ -0.23
SEC13-215ENST00000477547 SFXN3Q9BWM7 321 aa13.63□□□□□ -0.23
SEC13-215ENST00000477547 DGCR6LQ9BY27 220 aa13.63□□□□□ -0.23
SEC13-215ENST00000477547 GABARAPL1Q9H0R8 117 aa13.63□□□□□ -0.23
SEC13-215ENST00000477547 MCCC2Q9HCC0 563 aa13.63□□□□□ -0.23
SEC13-215ENST00000477547 SIGLEC7Q9Y286 467 aa13.63□□□□□ -0.23
SEC13-215ENST00000477547 RRP15Q9Y3B9 282 aaKnown RBP13.63□□□□□ -0.23
SEC13-215ENST00000477547 FLVCR1Q9Y5Y0 555 aa13.63□□□□□ -0.23
SEC13-215ENST00000477547 ZNF724A8MTY0 619 aa13.62□□□□□ -0.23
SEC13-215ENST00000477547 GPR171O14626 319 aa13.62□□□□□ -0.23
SEC13-215ENST00000477547 TRAF3IP2O43734 574 aaPredicted RBP13.62□□□□□ -0.23
SEC13-215ENST00000477547 GASTP01350 101 aa13.62□□□□□ -0.23
SEC13-215ENST00000477547 CRHP06850 196 aa13.62□□□□□ -0.23
SEC13-215ENST00000477547 ANPEPP15144 967 aa13.62□□□□□ -0.23
SEC13-215ENST00000477547 ZNF43P17038 809 aa13.62□□□□□ -0.23
SEC13-215ENST00000477547 GSTM3P21266 225 aa13.62□□□□□ -0.23
SEC13-215ENST00000477547 PRKACGP22612 351 aa13.62□□□□□ -0.23
SEC13-215ENST00000477547 GUSBP1Q15486 140 aa13.62□□□□□ -0.23
SEC13-215ENST00000477547 TAF11Q15544 211 aa13.62□□□□□ -0.23
SEC13-215ENST00000477547 ALG10Q5BKT4 473 aa13.62□□□□□ -0.23
SEC13-215ENST00000477547 VWA1Q6PCB0 445 aa13.62□□□□□ -0.23
SEC13-215ENST00000477547 CASP12Q6UXS9 341 aa13.62□□□□□ -0.23
SEC13-215ENST00000477547 FAM214BQ7L5A3 538 aa13.62□□□□□ -0.23
SEC13-215ENST00000477547 STK32CQ86UX6 486 aa13.62□□□□□ -0.23
SEC13-215ENST00000477547 IGFN1Q86VF2 1251 aa13.62□□□□□ -0.23
SEC13-215ENST00000477547 CCDC71Q8IV32 467 aaPredicted RBP13.62□□□□□ -0.23
SEC13-215ENST00000477547 TUSC5Q8IXB3 177 aa13.62□□□□□ -0.23
SEC13-215ENST00000477547 NIPSNAP1Q9BPW8 284 aa13.62□□□□□ -0.23
SEC13-215ENST00000477547 ZNF556Q9HAH1 456 aa13.62□□□□□ -0.23
SEC13-215ENST00000477547 INIPQ9NRY2 104 aa13.62□□□□□ -0.23
SEC13-215ENST00000477547 TAS2R5Q9NYW4 299 aa13.62□□□□□ -0.23
SEC13-215ENST00000477547 ERRFI1Q9UJM3 462 aaPredicted RBP13.62□□□□□ -0.23
SEC13-215ENST00000477547 RNF6Q9Y252 685 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms