RNA–Protein interactions for RNA: ENST00000477200.1

PIKFYVE-209, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 3

Gene PIKFYVE, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-209ENST00000477200 HIST1H2BAQ96A08 127 aa4.04□□□□□ -1.76
PIKFYVE-209ENST00000477200 ULK4Q96C45 1275 aa4.04□□□□□ -1.76
PIKFYVE-209ENST00000477200 SMIM12Q96EX1 92 aa4.04□□□□□ -1.76
PIKFYVE-209ENST00000477200 TPD52L3Q96J77 140 aa4.04□□□□□ -1.76
PIKFYVE-209ENST00000477200 PIWIL1Q96J94 861 aaKnown RBP4.04□□□□□ -1.76
PIKFYVE-209ENST00000477200 SMIM8Q96KF7 97 aa4.04□□□□□ -1.76
PIKFYVE-209ENST00000477200 C12orf66Q96MD2 445 aa4.04□□□□□ -1.76
PIKFYVE-209ENST00000477200 OR2A7Q96R45 310 aa4.04□□□□□ -1.76
PIKFYVE-209ENST00000477200 PRRT1Q99946 306 aa4.04□□□□□ -1.76
PIKFYVE-209ENST00000477200 MRPL57Q9BQC6 102 aaKnown RBP4.04□□□□□ -1.76
PIKFYVE-209ENST00000477200 MGME1Q9BQP7 344 aa4.04□□□□□ -1.76
PIKFYVE-209ENST00000477200 ACBD6Q9BR61 282 aa4.04□□□□□ -1.76
PIKFYVE-209ENST00000477200 RIOK2Q9BVS4 552 aaKnown RBP4.04□□□□□ -1.76
PIKFYVE-209ENST00000477200 DDA1Q9BW61 102 aa4.04□□□□□ -1.76
PIKFYVE-209ENST00000477200 IFT27Q9BW83 186 aa4.04□□□□□ -1.76
PIKFYVE-209ENST00000477200 MRPL13Q9BYD1 178 aaKnown RBP4.04□□□□□ -1.76
PIKFYVE-209ENST00000477200 PARD6GQ9BYG4 376 aaPredicted RBP4.04□□□□□ -1.76
PIKFYVE-209ENST00000477200 MAGEB5Q9BZ81 275 aa4.04□□□□□ -1.76
PIKFYVE-209ENST00000477200 TMEM117Q9H0C3 514 aa4.04□□□□□ -1.76
PIKFYVE-209ENST00000477200 UBQLN3Q9H347 655 aa4.04□□□□□ -1.76
PIKFYVE-209ENST00000477200 SMURF2Q9HAU4 748 aa4.04□□□□□ -1.76
PIKFYVE-209ENST00000477200 SLC25A19Q9HC21 320 aa4.04□□□□□ -1.76
PIKFYVE-209ENST00000477200 UBE2TQ9NPD8 197 aaPredicted RBP4.04□□□□□ -1.76
PIKFYVE-209ENST00000477200 KRCC1Q9NPI7 259 aaPredicted RBP4.04□□□□□ -1.76
PIKFYVE-209ENST00000477200 MIOSQ9NXC5 875 aa4.04□□□□□ -1.76
PIKFYVE-209ENST00000477200 LEF1Q9UJU2 399 aaPredicted RBP4.04□□□□□ -1.76
PIKFYVE-209ENST00000477200 FBXL4Q9UKA2 621 aa4.04□□□□□ -1.76
PIKFYVE-209ENST00000477200 IKZF3Q9UKT9 509 aa4.04□□□□□ -1.76
PIKFYVE-209ENST00000477200 SAMD4AQ9UPU9 718 aaKnown RBP4.04□□□□□ -1.76
PIKFYVE-209ENST00000477200 SLC27A6Q9Y2P4 619 aa4.04□□□□□ -1.76
PIKFYVE-209ENST00000477200 POMT1Q9Y6A1 747 aa4.04□□□□□ -1.76
PIKFYVE-209ENST00000477200 DDX60LQ5H9U9 1706 aaKnown RBP4.04□□□□□ -1.76
PIKFYVE-209ENST00000477200 PEAK1Q9H792 1746 aa4.04□□□□□ -1.76
PIKFYVE-209ENST00000477200 TNS3Q68CZ2 1445 aa4.04□□□□□ -1.76
PIKFYVE-209ENST00000477200 ZNF638Q14966 1978 aaKnown RBP4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 A0A0J9YYE9 177 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 A0A1B0GUH1 482 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 LRIT2A6NDA9 550 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 C5orf51A6NDU8 294 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 CXorf65A6NEN9 183 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 DUXAA6NLW8 204 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 AGAP14A8MT82 685 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 SNRPGP15A8MWD9 76 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 ISM1B1AKI9 464 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 ZNF587BE7ETH6 402 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 BHLHE40O14503 412 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 DVL1O14640 695 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 KDELR3O43731 214 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 SSNA1O43805 119 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 GALR3O60755 368 aaPredicted RBP4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 EEDO75530 441 aaKnown RBP4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 CTAG2O75638 210 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 ATP6AP2O75787 350 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 AP2A2O94973 939 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 AKR7A3O95154 331 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 VNN2O95498 520 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 PRAMEF12O95522 483 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 GLP2RO95838 553 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 SLC25A27O95847 323 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 CST1P01037 141 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 TRBC1P01850 177 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 TFP02787 698 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 HIST1H2ABP04908 130 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 MELTFP08582 738 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 RPA2P15927 270 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 NQO2P16083 231 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 PGAM1P18669 254 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 CD58P19256 250 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 GGT1P19440 569 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 CXCL2P19875 107 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 RAB5AP20339 215 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 HRH2P25021 359 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 MPZP25189 248 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 ALDH3B1P43353 468 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 CAPZBP47756 277 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 EVX1P49640 407 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 TAF6P49848 677 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 SLC12A3P55017 1021 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 VSX2P58304 361 aaPredicted RBP4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 ACTBP60709 375 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 CDC42P60953 191 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 TIMM10P62072 90 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 LSM6P62312 80 aaKnown RBP4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 ACTA2P62736 377 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 RAB1AP62820 205 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 ACTG1P63261 375 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 ACTG2P63267 376 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 ACTC1P68032 377 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 ACTA1P68133 377 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 TMEM115Q12893 351 aaPredicted RBP4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 SKP2Q13309 424 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 GPR176Q14439 515 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 SURF2Q15527 256 aaPredicted RBP4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 MED22Q15528 200 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 TSNQ15631 228 aaKnown RBP4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 SMAD1Q15797 465 aaKnown RBP4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 GSG1Q2KHT4 349 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 ISXQ2M1V0 245 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 MOGAT2Q3SYC2 334 aa4.03□□□□□ -1.76
PIKFYVE-209ENST00000477200 RFTN2Q52LD8 501 aaPredicted RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms