RNA–Protein interactions for RNA: ENST00000476367.5

CCNL1-217, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-217ENST00000476367 GPAT4Q86UL3 456 aa12.78□□□□□ -0.36
CCNL1-217ENST00000476367 ZIC4Q8N9L1 334 aa12.78□□□□□ -0.36
CCNL1-217ENST00000476367 KLHL4Q9C0H6 718 aa12.78□□□□□ -0.36
CCNL1-217ENST00000476367 SEMA6AQ9H2E6 1030 aa12.78□□□□□ -0.36
CCNL1-217ENST00000476367 PIGMQ9H3S5 423 aa12.78□□□□□ -0.36
CCNL1-217ENST00000476367 REEP1Q9H902 201 aa12.78□□□□□ -0.36
CCNL1-217ENST00000476367 FKRPQ9H9S5 495 aa12.78□□□□□ -0.36
CCNL1-217ENST00000476367 MRPL39Q9NYK5 338 aaKnown RBP12.78□□□□□ -0.36
CCNL1-217ENST00000476367 CRYBG3Q68DQ2 2970 aa12.77□□□□□ -0.36
CCNL1-217ENST00000476367 PLPP3O14495 311 aa12.77□□□□□ -0.36
CCNL1-217ENST00000476367 PTP4A3O75365 173 aa12.77□□□□□ -0.36
CCNL1-217ENST00000476367 DEAF1O75398 565 aaPredicted RBP12.77□□□□□ -0.36
CCNL1-217ENST00000476367 MT-ATP6P00846 226 aa12.77□□□□□ -0.36
CCNL1-217ENST00000476367 YES1P07947 543 aa12.77□□□□□ -0.36
CCNL1-217ENST00000476367 FASP25445 335 aa12.77□□□□□ -0.36
CCNL1-217ENST00000476367 DNAJA1P31689 397 aaKnown RBP12.77□□□□□ -0.36
CCNL1-217ENST00000476367 IFNA8P32881 189 aa12.77□□□□□ -0.36
CCNL1-217ENST00000476367 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.77□□□□□ -0.36
CCNL1-217ENST00000476367 LRRC75AQ8NAA5 344 aa12.77□□□□□ -0.36
CCNL1-217ENST00000476367 OR13C2Q8NGS9 318 aa12.77□□□□□ -0.36
CCNL1-217ENST00000476367 SGTBQ96EQ0 304 aa12.77□□□□□ -0.36
CCNL1-217ENST00000476367 NIPSNAP1Q9BPW8 284 aa12.77□□□□□ -0.36
CCNL1-217ENST00000476367 RBM24Q9BX46 236 aaKnown RBP12.77□□□□□ -0.36
CCNL1-217ENST00000476367 YY1AP1Q9H869 796 aa12.77□□□□□ -0.36
CCNL1-217ENST00000476367 BCO1Q9HAY6 547 aa12.77□□□□□ -0.36
CCNL1-217ENST00000476367 CHST11Q9NPF2 352 aa12.77□□□□□ -0.36
CCNL1-217ENST00000476367 FANCFQ9NPI8 374 aa12.77□□□□□ -0.36
CCNL1-217ENST00000476367 NANSQ9NR45 359 aa12.77□□□□□ -0.36
CCNL1-217ENST00000476367 GALNT8Q9NY28 637 aa12.77□□□□□ -0.36
CCNL1-217ENST00000476367 EMC3Q9P0I2 261 aa12.77□□□□□ -0.36
CCNL1-217ENST00000476367 ZNF229Q9UJW7 825 aa12.77□□□□□ -0.36
CCNL1-217ENST00000476367 IGKV3D-15A0A087WSY6 115 aa12.77□□□□□ -0.37
CCNL1-217ENST00000476367 MSTNO14793 375 aa12.77□□□□□ -0.37
CCNL1-217ENST00000476367 CGAP01215 116 aa12.77□□□□□ -0.37
CCNL1-217ENST00000476367 SLC16A1P53985 500 aa12.77□□□□□ -0.37
CCNL1-217ENST00000476367 SNTB1Q13884 538 aaKnown RBP12.77□□□□□ -0.37
CCNL1-217ENST00000476367 EEF1A1P5Q5VTE0 462 aa12.77□□□□□ -0.37
CCNL1-217ENST00000476367 TMEM225Q6GV28 225 aa12.77□□□□□ -0.37
CCNL1-217ENST00000476367 SHQ1Q6PI26 577 aaKnown RBP12.77□□□□□ -0.37
CCNL1-217ENST00000476367 H1FNTQ75WM6 255 aaPredicted RBP12.77□□□□□ -0.37
CCNL1-217ENST00000476367 SCAIQ8N9R8 606 aa12.77□□□□□ -0.37
CCNL1-217ENST00000476367 ZNF610Q8N9Z0 462 aa12.77□□□□□ -0.37
CCNL1-217ENST00000476367 ADPRHL1Q8NDY3 354 aa12.77□□□□□ -0.37
CCNL1-217ENST00000476367 OR5J2Q8NH18 312 aa12.77□□□□□ -0.37
CCNL1-217ENST00000476367 MOSPD2Q8NHP6 518 aa12.77□□□□□ -0.37
CCNL1-217ENST00000476367 CENPNQ96H22 339 aaPredicted RBP12.77□□□□□ -0.37
CCNL1-217ENST00000476367 FEVQ99581 238 aa12.77□□□□□ -0.37
CCNL1-217ENST00000476367 TACO1Q9BSH4 297 aaKnown RBP12.77□□□□□ -0.37
CCNL1-217ENST00000476367 MCCC2Q9HCC0 563 aa12.77□□□□□ -0.37
CCNL1-217ENST00000476367 GP6Q9HCN6 339 aa12.77□□□□□ -0.37
CCNL1-217ENST00000476367 JKAMPQ9P055 326 aa12.77□□□□□ -0.37
CCNL1-217ENST00000476367 SIGLEC7Q9Y286 467 aa12.77□□□□□ -0.37
CCNL1-217ENST00000476367 B3GALT5Q9Y2C3 310 aa12.77□□□□□ -0.37
CCNL1-217ENST00000476367 PRR14LQ5THK1 2151 aa12.76□□□□□ -0.37
CCNL1-217ENST00000476367 TRAV27A0A087WT01 109 aa12.76□□□□□ -0.37
CCNL1-217ENST00000476367 LOC102725191A0A1B0GVB3 256 aa12.76□□□□□ -0.37
CCNL1-217ENST00000476367 ARRDC5A6NEK1 342 aa12.76□□□□□ -0.37
CCNL1-217ENST00000476367 OR10H3O60404 316 aa12.76□□□□□ -0.37
CCNL1-217ENST00000476367 CD8BP10966 210 aa12.76□□□□□ -0.37
CCNL1-217ENST00000476367 IL1RL1Q01638 556 aa12.76□□□□□ -0.37
CCNL1-217ENST00000476367 THSD4Q6ZMP0 1018 aa12.76□□□□□ -0.37
CCNL1-217ENST00000476367 KIF18BQ86Y91 864 aa12.76□□□□□ -0.37
CCNL1-217ENST00000476367 PQLC1Q8N2U9 271 aa12.76□□□□□ -0.37
CCNL1-217ENST00000476367 AQP11Q8NBQ7 271 aa12.76□□□□□ -0.37
CCNL1-217ENST00000476367 RNASE6Q93091 150 aaKnown RBP12.76□□□□□ -0.37
CCNL1-217ENST00000476367 LRRC46Q96FV0 321 aa12.76□□□□□ -0.37
CCNL1-217ENST00000476367 TNFRSF13CQ96RJ3 184 aa12.76□□□□□ -0.37
CCNL1-217ENST00000476367 ASPNQ9BXN1 380 aa12.76□□□□□ -0.37
CCNL1-217ENST00000476367 PDP1Q9P0J1 537 aaPredicted RBP12.76□□□□□ -0.37
CCNL1-217ENST00000476367 NKX1-2Q9UD57 310 aaPredicted RBP12.76□□□□□ -0.37
CCNL1-217ENST00000476367 OAZ3Q9UMX2 235 aa12.76□□□□□ -0.37
CCNL1-217ENST00000476367 HIF3AQ9Y2N7 669 aa12.76□□□□□ -0.37
CCNL1-217ENST00000476367 NOSIPQ9Y314 301 aaKnown RBP12.76□□□□□ -0.37
CCNL1-217ENST00000476367 CORINQ9Y5Q5 1042 aa12.76□□□□□ -0.37
CCNL1-217ENST00000476367 PKDREJQ9NTG1 2253 aa12.76□□□□□ -0.37
CCNL1-217ENST00000476367 ZNF724A8MTY0 619 aa12.75□□□□□ -0.37
CCNL1-217ENST00000476367 A8MXE2 369 aa12.75□□□□□ -0.37
CCNL1-217ENST00000476367 TRAF3IP2O43734 574 aaPredicted RBP12.75□□□□□ -0.37
CCNL1-217ENST00000476367 CCNB2O95067 398 aa12.75□□□□□ -0.37
CCNL1-217ENST00000476367 IGFBP1P08833 259 aaPredicted RBP12.75□□□□□ -0.37
CCNL1-217ENST00000476367 POU2F1P14859 743 aa12.75□□□□□ -0.37
CCNL1-217ENST00000476367 FPR3P25089 353 aa12.75□□□□□ -0.37
CCNL1-217ENST00000476367 AQP2P41181 271 aa12.75□□□□□ -0.37
CCNL1-217ENST00000476367 DAPP51397 102 aa12.75□□□□□ -0.37
CCNL1-217ENST00000476367 RPL18Q07020 188 aaKnown RBP12.75□□□□□ -0.37
CCNL1-217ENST00000476367 ZP4Q12836 540 aa12.75□□□□□ -0.37
CCNL1-217ENST00000476367 GK3PQ14409 553 aa12.75□□□□□ -0.37
CCNL1-217ENST00000476367 FBXL19-AS1Q494R0 122 aa12.75□□□□□ -0.37
CCNL1-217ENST00000476367 FAHD1Q6P587 224 aa12.75□□□□□ -0.37
CCNL1-217ENST00000476367 ZNF474Q6S9Z5 364 aaPredicted RBP12.75□□□□□ -0.37
CCNL1-217ENST00000476367 CASP12Q6UXS9 341 aa12.75□□□□□ -0.37
CCNL1-217ENST00000476367 TFAP2EQ6VUC0 442 aa12.75□□□□□ -0.37
CCNL1-217ENST00000476367 MEX3BQ6ZN04 569 aaKnown RBP12.75□□□□□ -0.37
CCNL1-217ENST00000476367 GALNT5Q7Z7M9 940 aa12.75□□□□□ -0.37
CCNL1-217ENST00000476367 STK32CQ86UX6 486 aa12.75□□□□□ -0.37
CCNL1-217ENST00000476367 OR10G2Q8NGC3 310 aa12.75□□□□□ -0.37
CCNL1-217ENST00000476367 OR9K2Q8NGE7 335 aa12.75□□□□□ -0.37
CCNL1-217ENST00000476367 OR51A7Q8NH64 312 aa12.75□□□□□ -0.37
CCNL1-217ENST00000476367 GIPC3Q8TF64 312 aa12.75□□□□□ -0.37
CCNL1-217ENST00000476367 NRBF2Q96F24 287 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms