RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 ITCHQ96J02 903 aa11.34□□□□□ -0.59
MRPL55-228ENST00000476267 OXGR1Q96P68 337 aa11.34□□□□□ -0.59
MRPL55-228ENST00000476267 OR2M2Q96R28 347 aa11.34□□□□□ -0.59
MRPL55-228ENST00000476267 OR52B2Q96RD2 323 aa11.34□□□□□ -0.59
MRPL55-228ENST00000476267 B3GNT2Q9NY97 397 aa11.34□□□□□ -0.59
MRPL55-228ENST00000476267 FBXO9Q9UK97 447 aaPredicted RBP11.34□□□□□ -0.59
MRPL55-228ENST00000476267 RAB21Q9UL25 225 aa11.34□□□□□ -0.59
MRPL55-228ENST00000476267 ZNF232Q9UNY5 417 aa11.34□□□□□ -0.59
MRPL55-228ENST00000476267 PCDHB14Q9Y5E9 798 aa11.34□□□□□ -0.59
MRPL55-228ENST00000476267 TMEM120BA0PK00 339 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 LRP5LA4QPB2 252 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 SLCO1B7G3V0H7 640 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 MS4A18H0YCH9 400 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 hCG_2039718K7EN88 272 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 M0R082 166 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 SLC43A1O75387 559 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 ANP32DO95626 131 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 TGFAP01135 160 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 KITP10721 976 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 DAOP14920 347 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 ZNF43P17038 809 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 NPR2P20594 1047 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 ARR3P36575 388 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 MRPL19P49406 292 aaKnown RBP11.33□□□□□ -0.6
MRPL55-228ENST00000476267 POLR2JP52435 117 aaKnown RBP11.33□□□□□ -0.6
MRPL55-228ENST00000476267 SLC18A1P54219 525 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 FADDQ13158 208 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 RIN1Q13671 783 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 MSMPQ1L6U9 139 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 CR1LQ2VPA4 569 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 MS4A18Q3C1V0 323 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 FAM69AQ5T7M9 428 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 HHATQ5VTY9 493 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 C5orf46Q6UWT4 87 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 ZNF627Q7L945 461 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 MDP1Q86V88 176 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 WDFY1Q8IWB7 410 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 MSRB3Q8IXL7 192 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 CDK20Q8IZL9 346 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 ZNF786Q8N393 782 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 SVOPLQ8N434 492 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 ANKRD42Q8N9B4 389 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 ADPRHL1Q8NDY3 354 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 BBS10Q8TAM1 723 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 ZNF417Q8TAU3 575 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 NEU4Q8WWR8 484 aaPredicted RBP11.33□□□□□ -0.6
MRPL55-228ENST00000476267 HPS1Q92902 700 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 SLC41A3Q96GZ6 507 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 ZNF587Q96SQ5 575 aaPredicted RBP11.33□□□□□ -0.6
MRPL55-228ENST00000476267 PAIP2Q9BPZ3 127 aaKnown RBP11.33□□□□□ -0.6
MRPL55-228ENST00000476267 RAB1BQ9H0U4 201 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 CENPHQ9H3R5 247 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 ARMC7Q9H6L4 198 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 RMND5AQ9H871 391 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 NOX3Q9HBY0 568 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 CRLF2Q9HC73 371 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 SLC25A37Q9NYZ2 338 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 ZNF224Q9NZL3 707 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 KLHL14Q9P2G3 628 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 GMEB1Q9Y692 573 aa11.33□□□□□ -0.6
MRPL55-228ENST00000476267 A0A1B0GWA3 101 aa11.32□□□□□ -0.6
MRPL55-228ENST00000476267 ZNF99A8MXY4 864 aaPredicted RBP11.32□□□□□ -0.6
MRPL55-228ENST00000476267 CLIC1O00299 241 aa11.32□□□□□ -0.6
MRPL55-228ENST00000476267 AIM2O14862 343 aa11.32□□□□□ -0.6
MRPL55-228ENST00000476267 OR2T1O43869 369 aa11.32□□□□□ -0.6
MRPL55-228ENST00000476267 HPRP00739 348 aa11.32□□□□□ -0.6
MRPL55-228ENST00000476267 ETS2P15036 469 aa11.32□□□□□ -0.6
MRPL55-228ENST00000476267 GRPRP30550 384 aa11.32□□□□□ -0.6
MRPL55-228ENST00000476267 PRKAR1BP31321 381 aa11.32□□□□□ -0.6
MRPL55-228ENST00000476267 CARTPTQ16568 116 aa11.32□□□□□ -0.6
MRPL55-228ENST00000476267 IQCCQ4KMZ1 466 aa11.32□□□□□ -0.6
MRPL55-228ENST00000476267 LRIF1Q5T3J3 769 aa11.32□□□□□ -0.6
MRPL55-228ENST00000476267 SLC2A7Q6PXP3 512 aa11.32□□□□□ -0.6
MRPL55-228ENST00000476267 GPR137CQ8N3F9 429 aa11.32□□□□□ -0.6
MRPL55-228ENST00000476267 SLC52A3Q9NQ40 469 aa11.32□□□□□ -0.6
MRPL55-228ENST00000476267 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.32□□□□□ -0.62e-21■■■■■ 27.3
MRPL55-228ENST00000476267 TRAV36DV7A0A075B6V5 113 aa11.31□□□□□ -0.6
MRPL55-228ENST00000476267 TRBV5-3A0A0A0MS03 114 aa11.31□□□□□ -0.6
MRPL55-228ENST00000476267 UBDO15205 165 aa11.31□□□□□ -0.6
MRPL55-228ENST00000476267 TPST1O60507 370 aa11.31□□□□□ -0.6
MRPL55-228ENST00000476267 TPST2O60704 377 aa11.31□□□□□ -0.6
MRPL55-228ENST00000476267 SEC14L2O76054 403 aa11.31□□□□□ -0.6
MRPL55-228ENST00000476267 BGLAPP02818 100 aa11.31□□□□□ -0.6
MRPL55-228ENST00000476267 ARAFP10398 606 aa11.31□□□□□ -0.6
MRPL55-228ENST00000476267 ZNF35P13682 527 aa11.31□□□□□ -0.6
MRPL55-228ENST00000476267 HLA-DOBP13765 273 aa11.31□□□□□ -0.6
MRPL55-228ENST00000476267 ZNF14P17017 642 aaPredicted RBP11.31□□□□□ -0.6
MRPL55-228ENST00000476267 HNF1AP20823 631 aa11.31□□□□□ -0.6
MRPL55-228ENST00000476267 NR4A1P22736 598 aa11.31□□□□□ -0.6
MRPL55-228ENST00000476267 GTF2E2P29084 291 aaKnown RBP11.31□□□□□ -0.6
MRPL55-228ENST00000476267 CHN2P52757 468 aa11.31□□□□□ -0.6
MRPL55-228ENST00000476267 CDH15P55291 814 aa11.31□□□□□ -0.6
MRPL55-228ENST00000476267 SQLEQ14534 574 aa11.31□□□□□ -0.6
MRPL55-228ENST00000476267 TRIP10Q15642 601 aa11.31□□□□□ -0.6
MRPL55-228ENST00000476267 GLIPR1L2Q4G1C9 344 aa11.31□□□□□ -0.6
MRPL55-228ENST00000476267 C6orf10Q5SRN2 563 aa11.31□□□□□ -0.6
MRPL55-228ENST00000476267 NXNQ6DKJ4 435 aa11.31□□□□□ -0.6
MRPL55-228ENST00000476267 DHRS4L2Q6PKH6 230 aa11.31□□□□□ -0.6
MRPL55-228ENST00000476267 H1FNTQ75WM6 255 aaPredicted RBP11.31□□□□□ -0.6
MRPL55-228ENST00000476267 SPATA21Q7Z572 469 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms