RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 GMFGO60234 142 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 IGHG4P01861 327 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 MDKP21741 143 aaPredicted RBP3.27□□□□□ -1.89
PTCD3-211ENST00000476215 PRDX3P30048 256 aaKnown RBP3.27□□□□□ -1.89
PTCD3-211ENST00000476215 PKNOX1P55347 436 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 RAP1BP61224 184 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 RPS14P62263 151 aaKnown RBP3.27□□□□□ -1.89
PTCD3-211ENST00000476215 MAP2K1Q02750 393 aaPredicted RBP3.27□□□□□ -1.89
PTCD3-211ENST00000476215 TGFBR3Q03167 851 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 KLRC3Q07444 240 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 C1orf61Q13536 156 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 ZNF658BQ4V348 819 aaPredicted RBP3.27□□□□□ -1.89
PTCD3-211ENST00000476215 C11orf71Q6IPW1 123 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 SMIM5Q71RC9 77 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 CCDC65Q8IXS2 484 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 SUMF2Q8NBJ7 301 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 GMCL1P1Q8NEA9 526 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 OR2T3Q8NH03 318 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 FBXO30Q8TB52 745 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 BRSK1Q8TDC3 778 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 FGF11Q92914 225 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 SEC22AQ96IW7 307 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 MBOAT4Q96T53 435 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 NRTNQ99748 197 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 SELENOIQ9C0D9 397 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 NXF3Q9H4D5 531 aaKnown RBP3.27□□□□□ -1.89
PTCD3-211ENST00000476215 SUDS3Q9H7L9 328 aaPredicted RBP3.27□□□□□ -1.89
PTCD3-211ENST00000476215 FOLH1BQ9HBA9 442 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 MMP26Q9NRE1 261 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 UFSP2Q9NUQ7 469 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 STAP1Q9ULZ2 295 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 PRPF19Q9UMS4 504 aaKnown RBP3.27□□□□□ -1.89
PTCD3-211ENST00000476215 TRAF3IP3Q9Y228 551 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 NUP188Q5SRE5 1749 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 NOTCH2Q04721 2471 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 SMG6Q86US8 1419 aaKnown RBP3.27□□□□□ -1.89
PTCD3-211ENST00000476215 NSD3Q9BZ95 1437 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 USP54Q70EL1 1684 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 RREB1Q92766 1687 aa3.27□□□□□ -1.89
PTCD3-211ENST00000476215 MAP3K5Q99683 1374 aa3.26□□□□□ -1.89
PTCD3-211ENST00000476215 SH3TC1Q8TE82 1336 aa3.26□□□□□ -1.89
PTCD3-211ENST00000476215 IGHV1OR21-1A0A087WYE8 117 aa3.26□□□□□ -1.89
PTCD3-211ENST00000476215 ARPC3O15145 178 aa3.26□□□□□ -1.89
PTCD3-211ENST00000476215 MAGEB3O15480 346 aa3.26□□□□□ -1.89
PTCD3-211ENST00000476215 RGS16O15492 202 aaPredicted RBP3.26□□□□□ -1.89
PTCD3-211ENST00000476215 STAMBPO95630 424 aa3.26□□□□□ -1.89
PTCD3-211ENST00000476215 HSMCR30P0CW71 290 aa3.26□□□□□ -1.89
PTCD3-211ENST00000476215 CCDC130P13994 396 aa3.26□□□□□ -1.89
PTCD3-211ENST00000476215 RFC4P35249 363 aa3.26□□□□□ -1.89
PTCD3-211ENST00000476215 CTRLP40313 264 aa3.26□□□□□ -1.89
PTCD3-211ENST00000476215 IFNAR2P48551 515 aa3.26□□□□□ -1.89
PTCD3-211ENST00000476215 GRB7Q14451 532 aa3.26□□□□□ -1.89
PTCD3-211ENST00000476215 ATAD3BQ5T9A4 648 aa3.26□□□□□ -1.89
PTCD3-211ENST00000476215 TIGD3Q6B0B8 471 aa3.26□□□□□ -1.89
PTCD3-211ENST00000476215 ZNF571Q7Z3V5 609 aaPredicted RBP3.26□□□□□ -1.89
PTCD3-211ENST00000476215 RDH10Q8IZV5 341 aa3.26□□□□□ -1.89
PTCD3-211ENST00000476215 NKAPP1Q8N9T2 125 aa3.26□□□□□ -1.89
PTCD3-211ENST00000476215 OR51S1Q8NGJ8 323 aa3.26□□□□□ -1.89
PTCD3-211ENST00000476215 MYDGFQ969H8 173 aa3.26□□□□□ -1.89
PTCD3-211ENST00000476215 EFHD2Q96C19 240 aaPredicted RBP3.26□□□□□ -1.89
PTCD3-211ENST00000476215 LRRN3Q9H3W5 708 aa3.26□□□□□ -1.89
PTCD3-211ENST00000476215 MTRF1LQ9UGC7 380 aaKnown RBP3.26□□□□□ -1.89
PTCD3-211ENST00000476215 TIMM10BQ9Y5J6 103 aa3.26□□□□□ -1.89
PTCD3-211ENST00000476215 SLCO1B1Q9Y6L6 691 aa3.26□□□□□ -1.89
PTCD3-211ENST00000476215 FRMPD3Q5JV73 1810 aa3.26□□□□□ -1.89
PTCD3-211ENST00000476215 A0A1B0GUA9 196 aa3.25□□□□□ -1.89
PTCD3-211ENST00000476215 H0YCG3 227 aa3.25□□□□□ -1.89
PTCD3-211ENST00000476215 POLR2DO15514 142 aaKnown RBP3.25□□□□□ -1.89
PTCD3-211ENST00000476215 MBTPS2O43462 519 aa3.25□□□□□ -1.89
PTCD3-211ENST00000476215 UGT1A9O60656 530 aa3.25□□□□□ -1.89
PTCD3-211ENST00000476215 RHOBTB1O94844 696 aa3.25□□□□□ -1.89
PTCD3-211ENST00000476215 AP2A1O95782 977 aa3.25□□□□□ -1.89
PTCD3-211ENST00000476215 INSP01308 110 aa3.25□□□□□ -1.89
PTCD3-211ENST00000476215 OPN1MWP04001 364 aa3.25□□□□□ -1.89
PTCD3-211ENST00000476215 IGHV4-34P06331 123 aa3.25□□□□□ -1.89
PTCD3-211ENST00000476215 OPN1MW2P0DN77 364 aa3.25□□□□□ -1.89
PTCD3-211ENST00000476215 OPN1MW3P0DN78 364 aa3.25□□□□□ -1.89
PTCD3-211ENST00000476215 PRG2P13727 222 aa3.25□□□□□ -1.89
PTCD3-211ENST00000476215 CXCR2P25025 360 aa3.25□□□□□ -1.89
PTCD3-211ENST00000476215 RDXP35241 583 aaKnown RBP3.25□□□□□ -1.89
PTCD3-211ENST00000476215 NUDT1P36639 197 aa3.25□□□□□ -1.89
PTCD3-211ENST00000476215 MAP3K8P41279 467 aa3.25□□□□□ -1.89
PTCD3-211ENST00000476215 TAF7Q15545 349 aaPredicted RBP3.25□□□□□ -1.89
PTCD3-211ENST00000476215 MPPED2Q15777 294 aa3.25□□□□□ -1.89
PTCD3-211ENST00000476215 BCL7AQ4VC05 210 aa3.25□□□□□ -1.89
PTCD3-211ENST00000476215 CFAP157Q5JU67 520 aa3.25□□□□□ -1.89
PTCD3-211ENST00000476215 SAMD4BQ5PRF9 694 aaKnown RBP3.25□□□□□ -1.89
PTCD3-211ENST00000476215 C1orf100Q5SVJ3 147 aa3.25□□□□□ -1.89
PTCD3-211ENST00000476215 TMIGD1Q6UXZ0 262 aa3.25□□□□□ -1.89
PTCD3-211ENST00000476215 C6orf223Q8N319 242 aa3.25□□□□□ -1.89
PTCD3-211ENST00000476215 PNKDQ8N490 385 aa3.25□□□□□ -1.89
PTCD3-211ENST00000476215 OR4K14Q8NGD5 310 aa3.25□□□□□ -1.89
PTCD3-211ENST00000476215 PIGCQ92535 297 aa3.25□□□□□ -1.89
PTCD3-211ENST00000476215 EMG1Q92979 244 aaKnown RBP3.25□□□□□ -1.89
PTCD3-211ENST00000476215 PAGE5Q96GU1 130 aa3.25□□□□□ -1.89
PTCD3-211ENST00000476215 KCNA7Q96RP8 456 aa3.25□□□□□ -1.89
PTCD3-211ENST00000476215 SDHCQ99643 169 aaPredicted RBP3.25□□□□□ -1.89
PTCD3-211ENST00000476215 RASL11BQ9BPW5 248 aa3.25□□□□□ -1.89
PTCD3-211ENST00000476215 NAT9Q9BTE0 207 aa3.25□□□□□ -1.89
PTCD3-211ENST00000476215 RAB34Q9BZG1 259 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms