RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 NSMAFQ92636 917 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 GHSRQ92847 366 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 NXPE2Q96DL1 559 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 BPIFA2Q96DR5 249 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 OTUB1Q96FW1 271 aaPredicted RBP6.27□□□□□ -1.41
UBR4-212ENST00000475973 PEX11GQ96HA9 241 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 MAP6Q96JE9 813 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 C12orf66Q96MD2 445 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 FERD3LQ96RJ6 166 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 ZNF559Q9BR84 538 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 LMF2Q9BU23 707 aaKnown RBP6.27□□□□□ -1.41
UBR4-212ENST00000475973 C1QTNF7Q9BXJ2 289 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 DPH1Q9BZG8 443 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 NRIP3Q9NQ35 241 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 H2AFY2Q9P0M6 372 aaPredicted RBP6.27□□□□□ -1.41
UBR4-212ENST00000475973 MALT1Q9UDY8 824 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 GPN3Q9UHW5 284 aaPredicted RBP6.27□□□□□ -1.41
UBR4-212ENST00000475973 ING1Q9UK53 422 aaPredicted RBP6.27□□□□□ -1.41
UBR4-212ENST00000475973 POMT2Q9UKY4 750 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 MGAT4AQ9UM21 535 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 ZNF780BQ9Y6R6 833 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 LAMA1P25391 3075 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 EML5Q05BV3 1969 aa6.27□□□□□ -1.41
UBR4-212ENST00000475973 NUP210LQ5VU65 1888 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 TRBV5-7A0A0A0MS05 114 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 ZC3H12DA2A288 527 aaKnown RBP6.26□□□□□ -1.41
UBR4-212ENST00000475973 HMSDA8MTL9 139 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 LRRN3E7EW58 273 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 AIPO00170 330 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 IMPA2O14732 288 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 ADAM11O75078 769 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 B3GALNT1O75752 331 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 ABHD16AO95870 558 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 ECDO95905 644 aaPredicted RBP6.26□□□□□ -1.41
UBR4-212ENST00000475973 NGFRP08138 427 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 GIPP09681 153 aaPredicted RBP6.26□□□□□ -1.41
UBR4-212ENST00000475973 RAB40ALP0C0E4 278 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 THEGLP0DJG4 465 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 C8orf89P0DMQ9 161 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 CALCBP10092 127 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 IFI30P13284 250 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 BMP7P18075 431 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 PAICSP22234 425 aaKnown RBP6.26□□□□□ -1.41
UBR4-212ENST00000475973 UQCRC1P31930 480 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 ADH7P40394 386 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 SRP9P49458 86 aaKnown RBP6.26□□□□□ -1.41
UBR4-212ENST00000475973 GBX2P52951 348 aaPredicted RBP6.26□□□□□ -1.41
UBR4-212ENST00000475973 SLC25A1P53007 311 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 KIAA1024LP59773 190 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 ACTA2P62736 377 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 ACTG2P63267 376 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 SIRPAP78324 504 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 IGLV3-21P80748 117 aaPredicted RBP6.26□□□□□ -1.41
UBR4-212ENST00000475973 SRSF4Q08170 494 aaKnown RBP6.26□□□□□ -1.41
UBR4-212ENST00000475973 COL9A2Q14055 689 aaPredicted RBP6.26□□□□□ -1.41
UBR4-212ENST00000475973 KIR2DS3Q14952 304 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 AANATQ16613 207 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 UBE2NLQ5JXB2 153 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 DCST2Q5T1A1 773 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 FCRL6Q6DN72 434 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 RGS7BPQ6MZT1 257 aaPredicted RBP6.26□□□□□ -1.41
UBR4-212ENST00000475973 PWWP2BQ6NUJ5 590 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 ARHGAP11AQ6P4F7 1023 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 TMEM65Q6PI78 240 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 DHRS13Q6UX07 377 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 GLDNQ6ZMI3 551 aaPredicted RBP6.26□□□□□ -1.41
UBR4-212ENST00000475973 NLRC3Q7RTR2 1065 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 SLC36A1Q7Z2H8 476 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 C16orf62Q7Z3J2 963 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 HMGN2P46Q86SG4 172 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 TMPRSS12Q86WS5 348 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 SLC38A6Q8IZM9 456 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 CMTM4Q8IZR5 234 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 NPEPL1Q8NDH3 523 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 OR52L1Q8NGH7 329 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 OR2T4Q8NH00 348 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 OR5J2Q8NH18 312 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 SAP25Q8TEE9 199 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 THEM6Q8WUY1 208 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 RAB40AQ8WXH6 277 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 ASB13Q8WXK3 278 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 RGP1Q92546 391 aaPredicted RBP6.26□□□□□ -1.41
UBR4-212ENST00000475973 CNOT9Q92600 299 aaKnown RBP6.26□□□□□ -1.41
UBR4-212ENST00000475973 KAT2AQ92830 837 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 KLHDC7BQ96G42 594 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 C4orf36Q96KX1 117 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 KLHL15Q96M94 604 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 FCRL4Q96PJ5 515 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 SLC19A3Q9BZV2 496 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 ZNF436Q9C0F3 470 aaPredicted RBP6.26□□□□□ -1.41
UBR4-212ENST00000475973 ALX4Q9H161 411 aaPredicted RBP6.26□□□□□ -1.41
UBR4-212ENST00000475973 LRRN3Q9H3W5 708 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 XKR8Q9H6D3 395 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 WDR26Q9H7D7 661 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 MED20Q9H944 212 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 HRASLSQ9HDD0 168 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 MYOZ1Q9NP98 299 aaPredicted RBP6.26□□□□□ -1.41
UBR4-212ENST00000475973 PHPT1Q9NRX4 125 aaPredicted RBP6.26□□□□□ -1.41
UBR4-212ENST00000475973 NUDT15Q9NV35 164 aa6.26□□□□□ -1.41
UBR4-212ENST00000475973 TAS2R5Q9NYW4 299 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms