RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 SNX18Q96RF0 628 aa9.37□□□□□ -0.91
CDRT1-205ENST00000475944 PAIP2Q9BPZ3 127 aaKnown RBP9.37□□□□□ -0.91
CDRT1-205ENST00000475944 PTDSS2Q9BVG9 487 aa9.37□□□□□ -0.91
CDRT1-205ENST00000475944 C12orf10Q9HB07 376 aa9.37□□□□□ -0.91
CDRT1-205ENST00000475944 CRLF2Q9HC73 371 aa9.37□□□□□ -0.91
CDRT1-205ENST00000475944 GPR35Q9HC97 309 aa9.37□□□□□ -0.91
CDRT1-205ENST00000475944 KCNK9Q9NPC2 374 aa9.37□□□□□ -0.91
CDRT1-205ENST00000475944 SLC6A13Q9NSD5 602 aa9.37□□□□□ -0.91
CDRT1-205ENST00000475944 B3GAT1Q9P2W7 334 aa9.37□□□□□ -0.91
CDRT1-205ENST00000475944 RPS6KB2Q9UBS0 482 aa9.37□□□□□ -0.91
CDRT1-205ENST00000475944 USP22Q9UPT9 525 aa9.37□□□□□ -0.91
CDRT1-205ENST00000475944 CMAHPQ9Y471 501 aa9.37□□□□□ -0.91
CDRT1-205ENST00000475944 CHST2Q9Y4C5 530 aa9.37□□□□□ -0.91
CDRT1-205ENST00000475944 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.37□□□□□ -0.91
CDRT1-205ENST00000475944 ZNF99A8MXY4 864 aaPredicted RBP9.36□□□□□ -0.91
CDRT1-205ENST00000475944 FZD7O75084 574 aa9.36□□□□□ -0.91
CDRT1-205ENST00000475944 SLC22A3O75751 556 aa9.36□□□□□ -0.91
CDRT1-205ENST00000475944 ADRA2AP08913 450 aa9.36□□□□□ -0.91
CDRT1-205ENST00000475944 ITGA2P17301 1181 aa9.36□□□□□ -0.91
CDRT1-205ENST00000475944 EVX1P49640 407 aa9.36□□□□□ -0.91
CDRT1-205ENST00000475944 DVL1P1P54792 670 aaPredicted RBP9.36□□□□□ -0.91
CDRT1-205ENST00000475944 IL1RL1Q01638 556 aa9.36□□□□□ -0.91
CDRT1-205ENST00000475944 EGR4Q05215 589 aa9.36□□□□□ -0.91
CDRT1-205ENST00000475944 RIN1Q13671 783 aa9.36□□□□□ -0.91
CDRT1-205ENST00000475944 PDCD4Q53EL6 469 aaKnown RBP9.36□□□□□ -0.91
CDRT1-205ENST00000475944 NXNQ6DKJ4 435 aa9.36□□□□□ -0.91
CDRT1-205ENST00000475944 KRT80Q6KB66 452 aa9.36□□□□□ -0.91
CDRT1-205ENST00000475944 WDR93Q6P2C0 686 aa9.36□□□□□ -0.91
CDRT1-205ENST00000475944 C6orf89Q6UWU4 347 aa9.36□□□□□ -0.91
CDRT1-205ENST00000475944 MSANTD1Q6ZTZ1 278 aa9.36□□□□□ -0.91
CDRT1-205ENST00000475944 MDP1Q86V88 176 aa9.36□□□□□ -0.91
CDRT1-205ENST00000475944 MEX3DQ86XN8 651 aaKnown RBP9.36□□□□□ -0.91
CDRT1-205ENST00000475944 CDK20Q8IZL9 346 aa9.36□□□□□ -0.91
CDRT1-205ENST00000475944 MREGQ8N565 214 aa9.36□□□□□ -0.91
CDRT1-205ENST00000475944 SLC38A4Q969I6 547 aa9.36□□□□□ -0.91
CDRT1-205ENST00000475944 KTI12Q96EK9 354 aaPredicted RBP9.36□□□□□ -0.91
CDRT1-205ENST00000475944 C1orf159Q96HA4 380 aa9.36□□□□□ -0.91
CDRT1-205ENST00000475944 ITCHQ96J02 903 aa9.36□□□□□ -0.91
CDRT1-205ENST00000475944 TPK1Q9H3S4 243 aa9.36□□□□□ -0.91
CDRT1-205ENST00000475944 WDR55Q9H6Y2 383 aaPredicted RBP9.36□□□□□ -0.91
CDRT1-205ENST00000475944 NOX3Q9HBY0 568 aa9.36□□□□□ -0.91
CDRT1-205ENST00000475944 SEC14L4Q9UDX3 406 aa9.36□□□□□ -0.91
CDRT1-205ENST00000475944 SPEF1Q9Y4P9 236 aa9.36□□□□□ -0.91
CDRT1-205ENST00000475944 SVEP1Q4LDE5 3571 aa9.35□□□□□ -0.91
CDRT1-205ENST00000475944 A0A0A6YYJ9 748 aa9.35□□□□□ -0.91
CDRT1-205ENST00000475944 LOC102725191A0A1B0GVB3 256 aa9.35□□□□□ -0.91
CDRT1-205ENST00000475944 ZNF503-AS2A6NEH8 195 aa9.35□□□□□ -0.91
CDRT1-205ENST00000475944 B4DSR2 109 aa9.35□□□□□ -0.91
CDRT1-205ENST00000475944 SLCO1B7G3V0H7 640 aa9.35□□□□□ -0.91
CDRT1-205ENST00000475944 M0R082 166 aa9.35□□□□□ -0.91
CDRT1-205ENST00000475944 M0R233 179 aa9.35□□□□□ -0.91
CDRT1-205ENST00000475944 SYNGR3O43761 229 aa9.35□□□□□ -0.91
CDRT1-205ENST00000475944 SEC14L2O76054 403 aa9.35□□□□□ -0.91
CDRT1-205ENST00000475944 IGFBP1P08833 259 aaPredicted RBP9.35□□□□□ -0.91
CDRT1-205ENST00000475944 HOXC5Q00444 222 aa9.35□□□□□ -0.91
CDRT1-205ENST00000475944 CCNIQ14094 377 aa9.35□□□□□ -0.91
CDRT1-205ENST00000475944 MPP2Q14168 576 aa9.35□□□□□ -0.91
CDRT1-205ENST00000475944 MFSD13AQ14CX5 517 aa9.35□□□□□ -0.91
CDRT1-205ENST00000475944 TRIP10Q15642 601 aa9.35□□□□□ -0.91
CDRT1-205ENST00000475944 GSG1Q2KHT4 349 aa9.35□□□□□ -0.91
CDRT1-205ENST00000475944 GTDC1Q4AE62 458 aa9.35□□□□□ -0.91
CDRT1-205ENST00000475944 C6orf10Q5SRN2 563 aa9.35□□□□□ -0.91
CDRT1-205ENST00000475944 HHATQ5VTY9 493 aa9.35□□□□□ -0.91
CDRT1-205ENST00000475944 RINLQ6ZS11 566 aa9.35□□□□□ -0.91
CDRT1-205ENST00000475944 H1FNTQ75WM6 255 aaPredicted RBP9.35□□□□□ -0.91
CDRT1-205ENST00000475944 NET1Q7Z628 596 aaPredicted RBP9.35□□□□□ -0.91
CDRT1-205ENST00000475944 GLCCI1Q86VQ1 547 aa9.35□□□□□ -0.91
CDRT1-205ENST00000475944 TMEM123Q8N131 208 aa9.35□□□□□ -0.91
CDRT1-205ENST00000475944 ADPRHL1Q8NDY3 354 aa9.35□□□□□ -0.91
CDRT1-205ENST00000475944 BBS10Q8TAM1 723 aa9.35□□□□□ -0.91
CDRT1-205ENST00000475944 ZNF417Q8TAU3 575 aa9.35□□□□□ -0.91
CDRT1-205ENST00000475944 TAAR8Q969N4 342 aa9.35□□□□□ -0.91
CDRT1-205ENST00000475944 MRPL24Q96A35 216 aaKnown RBP9.35□□□□□ -0.91
CDRT1-205ENST00000475944 VPS33AQ96AX1 596 aa9.35□□□□□ -0.91
CDRT1-205ENST00000475944 ZNF837Q96EG3 531 aaPredicted RBP9.35□□□□□ -0.91
CDRT1-205ENST00000475944 OR2M2Q96R28 347 aa9.35□□□□□ -0.91
CDRT1-205ENST00000475944 ZNF587Q96SQ5 575 aaPredicted RBP9.35□□□□□ -0.91
CDRT1-205ENST00000475944 CENPHQ9H3R5 247 aa9.35□□□□□ -0.91
CDRT1-205ENST00000475944 MS4A5Q9H3V2 200 aa9.35□□□□□ -0.91
CDRT1-205ENST00000475944 RAD21L1Q9H4I0 556 aa9.35□□□□□ -0.91
CDRT1-205ENST00000475944 B3GAT2Q9NPZ5 323 aa9.35□□□□□ -0.91
CDRT1-205ENST00000475944 THAP1Q9NVV9 213 aa9.35□□□□□ -0.91
CDRT1-205ENST00000475944 ZIM2Q9NZV7 527 aa9.35□□□□□ -0.91
CDRT1-205ENST00000475944 METRNQ9UJH8 293 aa9.35□□□□□ -0.91
CDRT1-205ENST00000475944 NOX1Q9Y5S8 564 aa9.35□□□□□ -0.91
CDRT1-205ENST00000475944 TRAV36DV7A0A075B6V5 113 aa9.34□□□□□ -0.91
CDRT1-205ENST00000475944 C5orf58C9J3I9 102 aa9.34□□□□□ -0.91
CDRT1-205ENST00000475944 M0R3G1 203 aa9.34□□□□□ -0.91
CDRT1-205ENST00000475944 TRAF3IP2O43734 574 aaPredicted RBP9.34□□□□□ -0.91
CDRT1-205ENST00000475944 KITP10721 976 aa9.34□□□□□ -0.91
CDRT1-205ENST00000475944 CD79AP11912 226 aa9.34□□□□□ -0.91
CDRT1-205ENST00000475944 ETS2P15036 469 aa9.34□□□□□ -0.91
CDRT1-205ENST00000475944 NQO1P15559 274 aaKnown RBP9.34□□□□□ -0.91
CDRT1-205ENST00000475944 NR4A1P22736 598 aa9.34□□□□□ -0.91
CDRT1-205ENST00000475944 GRPRP30550 384 aa9.34□□□□□ -0.91
CDRT1-205ENST00000475944 NCALDP61601 193 aa9.34□□□□□ -0.91
CDRT1-205ENST00000475944 RPS23P62266 143 aaKnown RBP9.34□□□□□ -0.91
CDRT1-205ENST00000475944 FADDQ13158 208 aa9.34□□□□□ -0.91
CDRT1-205ENST00000475944 SCGB2A2Q13296 93 aa9.34□□□□□ -0.91
CDRT1-205ENST00000475944 RGNQ15493 299 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms