RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 KIF18AQ8NI77 898 aa17.61■□□□□ 0.41
VPS36-203ENST00000475375 STK35Q8TDR2 534 aa17.61■□□□□ 0.41
VPS36-203ENST00000475375 RDH5Q92781 318 aa17.61■□□□□ 0.41
VPS36-203ENST00000475375 ITM2AO43736 263 aa17.6■□□□□ 0.41
VPS36-203ENST00000475375 NPIPB7O75200 414 aa17.6■□□□□ 0.41
VPS36-203ENST00000475375 ZNF432O94892 652 aa17.6■□□□□ 0.41
VPS36-203ENST00000475375 MYZAPP0CAP1 466 aa17.6■□□□□ 0.41
VPS36-203ENST00000475375 GAAP10253 952 aa17.6■□□□□ 0.41
VPS36-203ENST00000475375 ACHEP22303 614 aa17.6■□□□□ 0.41
VPS36-203ENST00000475375 CDKN2CP42773 168 aa17.6■□□□□ 0.41
VPS36-203ENST00000475375 EVX1P49640 407 aa17.6■□□□□ 0.41
VPS36-203ENST00000475375 HILS1P60008 231 aa17.6■□□□□ 0.41
VPS36-203ENST00000475375 TRMT5Q32P41 509 aaKnown RBP17.6■□□□□ 0.41
VPS36-203ENST00000475375 ZNF311Q5JNZ3 666 aa17.6■□□□□ 0.41
VPS36-203ENST00000475375 REP15Q6BDI9 236 aa17.6■□□□□ 0.41
VPS36-203ENST00000475375 RIBC1Q8N443 379 aaPredicted RBP17.6■□□□□ 0.41
VPS36-203ENST00000475375 PIK3C3Q8NEB9 887 aa17.6■□□□□ 0.41
VPS36-203ENST00000475375 MS4A3Q96HJ5 214 aa17.6■□□□□ 0.41
VPS36-203ENST00000475375 OXGR1Q96P68 337 aa17.6■□□□□ 0.41
VPS36-203ENST00000475375 JMJD8Q96S16 334 aa17.6■□□□□ 0.41
VPS36-203ENST00000475375 ZNF275Q9NSD4 429 aaPredicted RBP17.6■□□□□ 0.41
VPS36-203ENST00000475375 P2RX2Q9UBL9 471 aa17.6■□□□□ 0.41
VPS36-203ENST00000475375 SEC14L4Q9UDX3 406 aa17.6■□□□□ 0.41
VPS36-203ENST00000475375 PRDM4Q9UKN5 801 aa17.6■□□□□ 0.41
VPS36-203ENST00000475375 ZNF443Q9Y2A4 671 aaPredicted RBP17.6■□□□□ 0.41
VPS36-203ENST00000475375 ZNF99A8MXY4 864 aaPredicted RBP17.59■□□□□ 0.41
VPS36-203ENST00000475375 M0R3G1 203 aa17.59■□□□□ 0.41
VPS36-203ENST00000475375 WNT9BO14905 357 aa17.59■□□□□ 0.41
VPS36-203ENST00000475375 AKAP8O43823 692 aaKnown RBP17.59■□□□□ 0.41
VPS36-203ENST00000475375 HLA-HP01893 362 aa17.59■□□□□ 0.41
VPS36-203ENST00000475375 LBPP18428 481 aa17.59■□□□□ 0.41
VPS36-203ENST00000475375 SEC24CP53992 1094 aa17.59■□□□□ 0.41
VPS36-203ENST00000475375 MAD2L1BPQ15013 274 aaPredicted RBP17.59■□□□□ 0.41
VPS36-203ENST00000475375 LARS2Q15031 903 aaKnown RBP17.59■□□□□ 0.41
VPS36-203ENST00000475375 CHI3L2Q15782 390 aa17.59■□□□□ 0.41
VPS36-203ENST00000475375 MSMPQ1L6U9 139 aa17.59■□□□□ 0.41
VPS36-203ENST00000475375 GSG1Q2KHT4 349 aa17.59■□□□□ 0.41
VPS36-203ENST00000475375 CARD17Q5XLA6 110 aa17.59■□□□□ 0.41
VPS36-203ENST00000475375 CLIP4Q8N3C7 705 aa17.59■□□□□ 0.41
VPS36-203ENST00000475375 PKNOX2Q96KN3 472 aa17.59■□□□□ 0.41
VPS36-203ENST00000475375 OR52E6Q96RD3 313 aa17.59■□□□□ 0.41
VPS36-203ENST00000475375 CALML5Q9NZT1 146 aa17.59■□□□□ 0.41
VPS36-203ENST00000475375 FZR1Q9UM11 496 aa17.59■□□□□ 0.41
VPS36-203ENST00000475375 TRAV20A0A0B4J274 112 aa17.58■□□□□ 0.4
VPS36-203ENST00000475375 WDR91A4D1P6 747 aa17.58■□□□□ 0.4
VPS36-203ENST00000475375 FTCDNL1E5RQL4 147 aa17.58■□□□□ 0.4
VPS36-203ENST00000475375 KRT75O95678 551 aa17.58■□□□□ 0.4
VPS36-203ENST00000475375 PNPP00491 289 aa17.58■□□□□ 0.4
VPS36-203ENST00000475375 BCHEP06276 602 aa17.58■□□□□ 0.4
VPS36-203ENST00000475375 TMEM33P57088 247 aa17.58■□□□□ 0.4
VPS36-203ENST00000475375 GALK2Q01415 458 aa17.58■□□□□ 0.4
VPS36-203ENST00000475375 PIGFQ07326 219 aa17.58■□□□□ 0.4
VPS36-203ENST00000475375 IFFO1Q0D2I5 559 aa17.58■□□□□ 0.4
VPS36-203ENST00000475375 USP43Q70EL4 1123 aa17.58■□□□□ 0.4
VPS36-203ENST00000475375 SERPINA11Q86U17 422 aa17.58■□□□□ 0.4
VPS36-203ENST00000475375 TEX29Q8N6K0 151 aa17.58■□□□□ 0.4
VPS36-203ENST00000475375 EIF1ADQ8N9N8 165 aaKnown RBP17.58■□□□□ 0.4
VPS36-203ENST00000475375 MGARPQ8TDB4 240 aa17.58■□□□□ 0.4
VPS36-203ENST00000475375 KTI12Q96EK9 354 aaPredicted RBP17.58■□□□□ 0.4
VPS36-203ENST00000475375 TEX37Q96LM6 180 aa17.58■□□□□ 0.4
VPS36-203ENST00000475375 OR2M2Q96R28 347 aa17.58■□□□□ 0.4
VPS36-203ENST00000475375 PTDSS2Q9BVG9 487 aa17.58■□□□□ 0.4
VPS36-203ENST00000475375 RACGAP1Q9H0H5 632 aa17.58■□□□□ 0.4
VPS36-203ENST00000475375 ARMC7Q9H6L4 198 aa17.58■□□□□ 0.4
VPS36-203ENST00000475375 ZNF232Q9UNY5 417 aa17.58■□□□□ 0.4
VPS36-203ENST00000475375 LOC105371242A0A075B767 164 aa17.57■□□□□ 0.4
VPS36-203ENST00000475375 A0A1W2PPW3 197 aa17.57■□□□□ 0.4
VPS36-203ENST00000475375 AIM2O14862 343 aa17.57■□□□□ 0.4
VPS36-203ENST00000475375 CRATP43155 626 aa17.57■□□□□ 0.4
VPS36-203ENST00000475375 LIMS1P48059 325 aa17.57■□□□□ 0.4
VPS36-203ENST00000475375 CRISP3P54108 245 aa17.57■□□□□ 0.4
VPS36-203ENST00000475375 ABCE1P61221 599 aaKnown RBP17.57■□□□□ 0.4
VPS36-203ENST00000475375 UFM1P61960 85 aa17.57■□□□□ 0.4
VPS36-203ENST00000475375 RPS23P62266 143 aaKnown RBP17.57■□□□□ 0.4
VPS36-203ENST00000475375 MAPK11Q15759 364 aa17.57■□□□□ 0.4
VPS36-203ENST00000475375 RPS26P11Q5JNZ5 115 aaPredicted RBP17.57■□□□□ 0.4
VPS36-203ENST00000475375 RNF220Q5VTB9 566 aa17.57■□□□□ 0.4
VPS36-203ENST00000475375 LRP11Q86VZ4 500 aa17.57■□□□□ 0.4
VPS36-203ENST00000475375 YIPF5Q969M3 257 aa17.57■□□□□ 0.4
VPS36-203ENST00000475375 ZNF416Q9BWM5 594 aa17.57■□□□□ 0.4
VPS36-203ENST00000475375 NUF2Q9BZD4 464 aa17.57■□□□□ 0.4
VPS36-203ENST00000475375 B3GAT1Q9P2W7 334 aa17.57■□□□□ 0.4
VPS36-203ENST00000475375 RPS6KB2Q9UBS0 482 aa17.57■□□□□ 0.4
VPS36-203ENST00000475375 DUSP13Q9UII6 198 aa17.57■□□□□ 0.4
VPS36-203ENST00000475375 RAP2CQ9Y3L5 183 aa17.57■□□□□ 0.4
VPS36-203ENST00000475375 DSPPQ9NZW4 1301 aa17.56■□□□□ 0.4
VPS36-203ENST00000475375 M0R082 166 aa17.56■□□□□ 0.4
VPS36-203ENST00000475375 SERPINE1P05121 402 aa17.56■□□□□ 0.4
VPS36-203ENST00000475375 NAT2P11245 290 aa17.56■□□□□ 0.4
VPS36-203ENST00000475375 GLRXP35754 106 aa17.56■□□□□ 0.4
VPS36-203ENST00000475375 PTDSS1P48651 473 aaKnown RBP17.56■□□□□ 0.4
VPS36-203ENST00000475375 RPL14P50914 215 aaKnown RBP17.56■□□□□ 0.4
VPS36-203ENST00000475375 HOXC5Q00444 222 aa17.56■□□□□ 0.4
VPS36-203ENST00000475375 MYBPC1Q00872 1141 aa17.56■□□□□ 0.4
VPS36-203ENST00000475375 EGR4Q05215 589 aa17.56■□□□□ 0.4
VPS36-203ENST00000475375 LRRC74AQ0VAA2 488 aa17.56■□□□□ 0.4
VPS36-203ENST00000475375 ZNF813Q6ZN06 617 aa17.56■□□□□ 0.4
VPS36-203ENST00000475375 ZNF417Q8TAU3 575 aa17.56■□□□□ 0.4
VPS36-203ENST00000475375 ZNF587Q96SQ5 575 aaPredicted RBP17.56■□□□□ 0.4
VPS36-203ENST00000475375 SUCNR1Q9BXA5 334 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms