RNA–Protein interactions for RNA: ENST00000474056.5

UPF3A-203, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 748 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-203ENST00000474056 OR1K1Q8NGR3 316 aa15.7■□□□□ 0.1
UPF3A-203ENST00000474056 RASSF5Q8WWW0 418 aa15.7■□□□□ 0.1
UPF3A-203ENST00000474056 RCN3Q96D15 328 aa15.7■□□□□ 0.1
UPF3A-203ENST00000474056 SMR3AQ99954 134 aa15.7■□□□□ 0.1
UPF3A-203ENST00000474056 GID8Q9NWU2 228 aa15.7■□□□□ 0.1
UPF3A-203ENST00000474056 MGAT4BQ9UQ53 548 aa15.7■□□□□ 0.1
UPF3A-203ENST00000474056 CORINQ9Y5Q5 1042 aa15.7■□□□□ 0.1
UPF3A-203ENST00000474056 ARFGEF3Q5TH69 2177 aa15.7■□□□□ 0.1
UPF3A-203ENST00000474056 OR6C65A6NJZ3 312 aa15.69■□□□□ 0.1
UPF3A-203ENST00000474056 CD8AP01732 235 aa15.69■□□□□ 0.1
UPF3A-203ENST00000474056 INHBBP09529 407 aa15.69■□□□□ 0.1
UPF3A-203ENST00000474056 PRPS1P60891 318 aa15.69■□□□□ 0.1
UPF3A-203ENST00000474056 SLC22A25Q6T423 547 aa15.69■□□□□ 0.1
UPF3A-203ENST00000474056 KLHL24Q6TFL4 600 aa15.69■□□□□ 0.1
UPF3A-203ENST00000474056 B3GLCTQ6Y288 498 aa15.69■□□□□ 0.1
UPF3A-203ENST00000474056 UEVLDQ8IX04 471 aa15.69■□□□□ 0.1
UPF3A-203ENST00000474056 CIARTQ8N365 385 aaPredicted RBP15.69■□□□□ 0.1
UPF3A-203ENST00000474056 SCAIQ8N9R8 606 aa15.69■□□□□ 0.1
UPF3A-203ENST00000474056 BOD1Q96IK1 185 aa15.69■□□□□ 0.1
UPF3A-203ENST00000474056 RADILQ96JH8 1075 aa15.69■□□□□ 0.1
UPF3A-203ENST00000474056 TRAF4Q9BUZ4 470 aaPredicted RBP15.69■□□□□ 0.1
UPF3A-203ENST00000474056 ASPNQ9BXN1 380 aa15.69■□□□□ 0.1
UPF3A-203ENST00000474056 NELFAQ9H3P2 528 aa15.69■□□□□ 0.1
UPF3A-203ENST00000474056 SLC7A7Q9UM01 511 aa15.69■□□□□ 0.1
UPF3A-203ENST00000474056 CR1P17927 2039 aa15.68■□□□□ 0.1
UPF3A-203ENST00000474056 LOC102725191A0A1B0GVB3 256 aa15.68■□□□□ 0.1
UPF3A-203ENST00000474056 TRAPPC13A5PLN9 417 aa15.68■□□□□ 0.1
UPF3A-203ENST00000474056 TRIM64A6NGJ6 449 aa15.68■□□□□ 0.1
UPF3A-203ENST00000474056 TRIM64BA6NI03 449 aa15.68■□□□□ 0.1
UPF3A-203ENST00000474056 FAM220BPB1ANY3 271 aa15.68■□□□□ 0.1
UPF3A-203ENST00000474056 E7EQL1 145 aa15.68■□□□□ 0.1
UPF3A-203ENST00000474056 H7C1Q1 480 aa15.68■□□□□ 0.1
UPF3A-203ENST00000474056 SLC22A2O15244 555 aa15.68■□□□□ 0.1
UPF3A-203ENST00000474056 ATP8B1O43520 1251 aa15.68■□□□□ 0.1
UPF3A-203ENST00000474056 SLC43A1O75387 559 aa15.68■□□□□ 0.1
UPF3A-203ENST00000474056 TNFRSF1BP20333 461 aa15.68■□□□□ 0.1
UPF3A-203ENST00000474056 ROR2Q01974 943 aaKnown RBP15.68■□□□□ 0.1
UPF3A-203ENST00000474056 POU3F1Q03052 451 aaPredicted RBP15.68■□□□□ 0.1
UPF3A-203ENST00000474056 VEZF1Q14119 521 aa15.68■□□□□ 0.1
UPF3A-203ENST00000474056 HMBOX1Q6NT76 420 aa15.68■□□□□ 0.1
UPF3A-203ENST00000474056 ERICH5Q6P6B1 374 aa15.68■□□□□ 0.1
UPF3A-203ENST00000474056 DTX2Q86UW9 622 aa15.68■□□□□ 0.1
UPF3A-203ENST00000474056 CARM1Q86X55 608 aa15.68■□□□□ 0.1
UPF3A-203ENST00000474056 C10orf53Q8N6V4 93 aa15.68■□□□□ 0.1
UPF3A-203ENST00000474056 OR2M2Q96R28 347 aa15.68■□□□□ 0.1
UPF3A-203ENST00000474056 PCDHAC1Q9H158 963 aa15.68■□□□□ 0.1
UPF3A-203ENST00000474056 MED29Q9NX70 200 aa15.68■□□□□ 0.1
UPF3A-203ENST00000474056 MRPL39Q9NYK5 338 aaKnown RBP15.68■□□□□ 0.1
UPF3A-203ENST00000474056 POU2F3Q9UKI9 436 aa15.68■□□□□ 0.1
UPF3A-203ENST00000474056 A0A096LPE4 126 aa15.67■□□□□ 0.1
UPF3A-203ENST00000474056 A0A1W2PPZ6 126 aa15.67■□□□□ 0.1
UPF3A-203ENST00000474056 RPL36A-HNRNPH2H7BZ11 118 aa15.67■□□□□ 0.1
UPF3A-203ENST00000474056 KPNA4O00629 521 aaPredicted RBP15.67■□□□□ 0.1
UPF3A-203ENST00000474056 AKAP8O43823 692 aaKnown RBP15.67■□□□□ 0.1
UPF3A-203ENST00000474056 WNT11O96014 354 aa15.67■□□□□ 0.1
UPF3A-203ENST00000474056 TUBA1BP68363 451 aa15.67■□□□□ 0.1
UPF3A-203ENST00000474056 TUBA4AP68366 448 aa15.67■□□□□ 0.1
UPF3A-203ENST00000474056 PUDPQ08623 228 aa15.67■□□□□ 0.1
UPF3A-203ENST00000474056 PMS2P3Q13401 168 aa15.67■□□□□ 0.1
UPF3A-203ENST00000474056 LRRC23Q53EV4 343 aaPredicted RBP15.67■□□□□ 0.1
UPF3A-203ENST00000474056 PHYHD1Q5SRE7 291 aa15.67■□□□□ 0.1
UPF3A-203ENST00000474056 TTC33Q6PID6 262 aaPredicted RBP15.67■□□□□ 0.1
UPF3A-203ENST00000474056 TUBA1AQ71U36 451 aa15.67■□□□□ 0.1
UPF3A-203ENST00000474056 BIVMQ86UB2 503 aa15.67■□□□□ 0.1
UPF3A-203ENST00000474056 WDFY1Q8IWB7 410 aa15.67■□□□□ 0.1
UPF3A-203ENST00000474056 TMEM123Q8N131 208 aa15.67■□□□□ 0.1
UPF3A-203ENST00000474056 OR5J2Q8NH18 312 aa15.67■□□□□ 0.1
UPF3A-203ENST00000474056 RP9Q8TA86 221 aaKnown RBP15.67■□□□□ 0.1
UPF3A-203ENST00000474056 PROX1Q92786 737 aa15.67■□□□□ 0.1
UPF3A-203ENST00000474056 BCL2L2Q92843 193 aaPredicted RBP15.67■□□□□ 0.1
UPF3A-203ENST00000474056 GTPBP3Q969Y2 492 aaKnown RBP15.67■□□□□ 0.1
UPF3A-203ENST00000474056 ZNF837Q96EG3 531 aaPredicted RBP15.67■□□□□ 0.1
UPF3A-203ENST00000474056 TXNDC15Q96J42 360 aa15.67■□□□□ 0.1
UPF3A-203ENST00000474056 COX4I2Q96KJ9 171 aa15.67■□□□□ 0.1
UPF3A-203ENST00000474056 EMC6Q9BV81 110 aa15.67■□□□□ 0.1
UPF3A-203ENST00000474056 ALG2Q9H553 416 aa15.67■□□□□ 0.1
UPF3A-203ENST00000474056 GPR35Q9HC97 309 aa15.67■□□□□ 0.1
UPF3A-203ENST00000474056 FAIMQ9NVQ4 179 aa15.67■□□□□ 0.1
UPF3A-203ENST00000474056 GMPR2Q9P2T1 348 aaKnown RBP15.67■□□□□ 0.1
UPF3A-203ENST00000474056 SH3GLB1Q9Y371 365 aa15.67■□□□□ 0.1
UPF3A-203ENST00000474056 C11orf98E9PRG8 122 aa15.66■□□□□ 0.1
UPF3A-203ENST00000474056 PLPP3O14495 311 aa15.66■□□□□ 0.1
UPF3A-203ENST00000474056 SHOX2O60902 331 aaPredicted RBP15.66■□□□□ 0.1
UPF3A-203ENST00000474056 SERPINI2O75830 405 aa15.66■□□□□ 0.1
UPF3A-203ENST00000474056 MT-ATP6P00846 226 aa15.66■□□□□ 0.1
UPF3A-203ENST00000474056 COX4I1P13073 169 aa15.66■□□□□ 0.1
UPF3A-203ENST00000474056 AHCYP23526 432 aa15.66■□□□□ 0.1
UPF3A-203ENST00000474056 CEACAM16Q2WEN9 425 aa15.66■□□□□ 0.1
UPF3A-203ENST00000474056 CARD17Q5XLA6 110 aa15.66■□□□□ 0.1
UPF3A-203ENST00000474056 NHLRC1Q6VVB1 395 aa15.66■□□□□ 0.1
UPF3A-203ENST00000474056 DEF8Q6ZN54 512 aa15.66■□□□□ 0.1
UPF3A-203ENST00000474056 TREML1Q86YW5 311 aa15.66■□□□□ 0.1
UPF3A-203ENST00000474056 MICU2Q8IYU8 434 aa15.66■□□□□ 0.1
UPF3A-203ENST00000474056 GPR137CQ8N3F9 429 aa15.66■□□□□ 0.1
UPF3A-203ENST00000474056 PIK3C3Q8NEB9 887 aa15.66■□□□□ 0.1
UPF3A-203ENST00000474056 OR2T12Q8NG77 320 aa15.66■□□□□ 0.1
UPF3A-203ENST00000474056 TRMT61AQ96FX7 289 aaKnown RBP15.66■□□□□ 0.1
UPF3A-203ENST00000474056 DHRS9Q9BPW9 319 aa15.66■□□□□ 0.1
UPF3A-203ENST00000474056 PRSS27Q9BQR3 290 aa15.66■□□□□ 0.1
UPF3A-203ENST00000474056 BDH2Q9BUT1 245 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms