RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 CXXC5Q7LFL8 322 aaKnown RBP9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 PXKQ7Z7A4 578 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 ADCK1Q86TW2 530 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 GTF2IRD2Q86UP8 949 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 GHDCQ8N2G8 530 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 RBMXL3Q8N7X1 1067 aaKnown RBP9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 TMEM99Q8N816 258 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 OR52E2Q8NGJ4 325 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 OR4Q3Q8NH05 313 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 OR10D3Q8NH80 312 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 CNIH3Q8TBE1 160 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 SLC39A7Q92504 469 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 MS4A3Q96HJ5 214 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 LRR1Q96L50 414 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 OXGR1Q96P68 337 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 GPX7Q96SL4 187 aaPredicted RBP9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 TXNIPQ9H3M7 391 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 FN3KQ9H479 309 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 ZDHHC11Q9H8X9 412 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 NRIP3Q9NQ35 241 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 CMC2Q9NRP2 79 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 EMC3Q9P0I2 261 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 LUZP4Q9P127 313 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 SCOCQ9UIL1 159 aa9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 RPL36Q9Y3U8 105 aaKnown RBP9.22□□□□□ -0.93
PRPF38A-202ENST00000474048 CNTRLQ7Z7A1 2325 aa9.21□□□□□ -0.93
PRPF38A-202ENST00000474048 A0A0J9YW62 118 aa9.21□□□□□ -0.94
PRPF38A-202ENST00000474048 M0R129 80 aa9.21□□□□□ -0.94
PRPF38A-202ENST00000474048 AQP7O14520 342 aa9.21□□□□□ -0.94
PRPF38A-202ENST00000474048 ARPC3O15145 178 aa9.21□□□□□ -0.94
PRPF38A-202ENST00000474048 ARHGEF9O43307 516 aa9.21□□□□□ -0.94
PRPF38A-202ENST00000474048 EFNA2O43921 213 aa9.21□□□□□ -0.94
PRPF38A-202ENST00000474048 TP53P04637 393 aaPredicted RBP9.21□□□□□ -0.94
PRPF38A-202ENST00000474048 CCDC159P0C7I6 412 aa9.21□□□□□ -0.94
PRPF38A-202ENST00000474048 SHC1P29353 583 aa9.21□□□□□ -0.94
PRPF38A-202ENST00000474048 FMO3P31513 532 aa9.21□□□□□ -0.94
PRPF38A-202ENST00000474048 CDH11P55287 796 aa9.21□□□□□ -0.94
PRPF38A-202ENST00000474048 CLRN1P58418 232 aa9.21□□□□□ -0.94
PRPF38A-202ENST00000474048 LTBQ06643 244 aa9.21□□□□□ -0.94
PRPF38A-202ENST00000474048 ZP4Q12836 540 aa9.21□□□□□ -0.94
PRPF38A-202ENST00000474048 CDK5R2Q13319 367 aa9.21□□□□□ -0.94
PRPF38A-202ENST00000474048 C6orf141Q5SZD1 244 aa9.21□□□□□ -0.94
PRPF38A-202ENST00000474048 ACSM5Q6NUN0 579 aa9.21□□□□□ -0.94
PRPF38A-202ENST00000474048 LEG1Q6P5S2 330 aa9.21□□□□□ -0.94
PRPF38A-202ENST00000474048 SLC35D2Q76EJ3 337 aa9.21□□□□□ -0.94
PRPF38A-202ENST00000474048 TRILQ7L0X0 811 aa9.21□□□□□ -0.94
PRPF38A-202ENST00000474048 FCRLAQ7L513 359 aa9.21□□□□□ -0.94
PRPF38A-202ENST00000474048 STX19Q8N4C7 294 aa9.21□□□□□ -0.94
PRPF38A-202ENST00000474048 KDF1Q8NAX2 398 aaPredicted RBP9.21□□□□□ -0.94
PRPF38A-202ENST00000474048 ZNF540Q8NDQ6 660 aa9.21□□□□□ -0.94
PRPF38A-202ENST00000474048 SDR9C7Q8NEX9 313 aa9.21□□□□□ -0.94
PRPF38A-202ENST00000474048 OR4K13Q8NH42 304 aa9.21□□□□□ -0.94
PRPF38A-202ENST00000474048 FNDC8Q8TC99 324 aa9.21□□□□□ -0.94
PRPF38A-202ENST00000474048 IPCEF1Q8WWN9 437 aaPredicted RBP9.21□□□□□ -0.94
PRPF38A-202ENST00000474048 MYDGFQ969H8 173 aa9.21□□□□□ -0.94
PRPF38A-202ENST00000474048 RASD2Q96D21 266 aa9.21□□□□□ -0.94
PRPF38A-202ENST00000474048 ADAD1Q96M93 576 aaKnown RBP9.21□□□□□ -0.94
PRPF38A-202ENST00000474048 CCDC90BQ9GZT6 254 aa9.21□□□□□ -0.94
PRPF38A-202ENST00000474048 RERGLQ9H628 205 aa9.21□□□□□ -0.94
PRPF38A-202ENST00000474048 CHCHD3Q9NX63 227 aaKnown RBP9.21□□□□□ -0.94
PRPF38A-202ENST00000474048 DNAJC27Q9NZQ0 273 aa9.21□□□□□ -0.94
PRPF38A-202ENST00000474048 KLHL9Q9P2J3 617 aa9.21□□□□□ -0.94
PRPF38A-202ENST00000474048 LHX6Q9UPM6 363 aa9.21□□□□□ -0.94
PRPF38A-202ENST00000474048 GPR52Q9Y2T5 361 aa9.21□□□□□ -0.94
PRPF38A-202ENST00000474048 ADAM18Q9Y3Q7 739 aa9.21□□□□□ -0.94
PRPF38A-202ENST00000474048 KIAA1549Q9HCM3 1950 aa9.21□□□□□ -0.94
PRPF38A-202ENST00000474048 FREM3P0C091 2139 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 AKAP13Q12802 2813 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 IGHV3-15A0A0B4J1V0 119 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 OR14I1A6ND48 311 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 EFCAB10A6NFE3 127 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 NPIPB13A6NJU9 1138 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 SLC22A31A6NKX4 558 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 NPIPB4C9JG80 1138 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 TAF4O00268 1085 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 SLC1A7O00341 560 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 GPR171O14626 319 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 PRODHO43272 600 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 PRKYO43930 277 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 KRT33AO76009 404 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 WISP1O95388 367 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 IGHG1P01857 330 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 IGHG3P01860 377 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 IGHMP01871 453 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 PDGFAP04085 211 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 IFNGR1P15260 489 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 HIST1H1CP16403 213 aaKnown RBP9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 ABOP16442 354 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 ZNF708P17019 499 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 GUCA1AP43080 201 aaPredicted RBP9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 CENPAP49450 140 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 LHX2P50458 406 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 GABARAPL2P60520 117 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 CXCR4P61073 352 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 ISL1P61371 349 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 RBPJQ06330 500 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 KLRB1Q12918 225 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 MELKQ14680 651 aa9.2□□□□□ -0.94
PRPF38A-202ENST00000474048 ACKR1Q16570 336 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms