RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 IFT27Q9BW83 186 aa17.38■□□□□ 0.37
CHMP2B-204ENST00000472024 CMC2Q9NRP2 79 aa17.38■□□□□ 0.37
CHMP2B-204ENST00000472024 INIPQ9NRY2 104 aa17.38■□□□□ 0.37
CHMP2B-204ENST00000472024 ZNF226Q9NYT6 803 aa17.38■□□□□ 0.37
CHMP2B-204ENST00000472024 UBAP1Q9NZ09 502 aa17.38■□□□□ 0.37
CHMP2B-204ENST00000472024 ITPR1Q14643 2758 aa17.38■□□□□ 0.37
CHMP2B-204ENST00000472024 NPIPA5E9PKD4 350 aa17.37■□□□□ 0.37
CHMP2B-204ENST00000472024 SMAD9O15198 467 aaKnown RBP17.37■□□□□ 0.37
CHMP2B-204ENST00000472024 CXCL13O43927 109 aa17.37■□□□□ 0.37
CHMP2B-204ENST00000472024 WISP2O76076 250 aa17.37■□□□□ 0.37
CHMP2B-204ENST00000472024 OR6A2O95222 327 aa17.37■□□□□ 0.37
CHMP2B-204ENST00000472024 PPP1R3DO95685 299 aa17.37■□□□□ 0.37
CHMP2B-204ENST00000472024 SDHAP31040 664 aa17.37■□□□□ 0.37
CHMP2B-204ENST00000472024 SLC16A1P53985 500 aa17.37■□□□□ 0.37
CHMP2B-204ENST00000472024 CTXN1P60606 82 aa17.37■□□□□ 0.37
CHMP2B-204ENST00000472024 MYBPC1Q00872 1141 aa17.37■□□□□ 0.37
CHMP2B-204ENST00000472024 MAD2L1BPQ15013 274 aaPredicted RBP17.37■□□□□ 0.37
CHMP2B-204ENST00000472024 CASP12Q6UXS9 341 aa17.37■□□□□ 0.37
CHMP2B-204ENST00000472024 PM20D2Q8IYS1 436 aa17.37■□□□□ 0.37
CHMP2B-204ENST00000472024 FAM26EQ8N5C1 309 aa17.37■□□□□ 0.37
CHMP2B-204ENST00000472024 ZNF519Q8TB69 540 aa17.37■□□□□ 0.37
CHMP2B-204ENST00000472024 FAM81AQ8TBF8 368 aa17.37■□□□□ 0.37
CHMP2B-204ENST00000472024 ZPLD1Q8TCW7 415 aa17.37■□□□□ 0.37
CHMP2B-204ENST00000472024 OXGR1Q96P68 337 aa17.37■□□□□ 0.37
CHMP2B-204ENST00000472024 SLC38A2Q96QD8 506 aa17.37■□□□□ 0.37
CHMP2B-204ENST00000472024 DDOQ99489 341 aa17.37■□□□□ 0.37
CHMP2B-204ENST00000472024 KATNB1Q9BVA0 655 aa17.37■□□□□ 0.37
CHMP2B-204ENST00000472024 TXNIPQ9H3M7 391 aa17.37■□□□□ 0.37
CHMP2B-204ENST00000472024 FN3KQ9H479 309 aa17.37■□□□□ 0.37
CHMP2B-204ENST00000472024 IL20RAQ9UHF4 553 aa17.37■□□□□ 0.37
CHMP2B-204ENST00000472024 NPIPA1Q9UND3 350 aa17.37■□□□□ 0.37
CHMP2B-204ENST00000472024 RNF6Q9Y252 685 aa17.37■□□□□ 0.37
CHMP2B-204ENST00000472024 ZNF175Q9Y473 711 aa17.37■□□□□ 0.37
CHMP2B-204ENST00000472024 NOX1Q9Y5S8 564 aa17.37■□□□□ 0.37
CHMP2B-204ENST00000472024 SPTA1P02549 2419 aa17.37■□□□□ 0.37
CHMP2B-204ENST00000472024 KIAA1549Q9HCM3 1950 aa17.37■□□□□ 0.37
CHMP2B-204ENST00000472024 CYTIPO60759 359 aa17.36■□□□□ 0.37
CHMP2B-204ENST00000472024 ENPP1P22413 925 aa17.36■□□□□ 0.37
CHMP2B-204ENST00000472024 CD47Q08722 323 aa17.36■□□□□ 0.37
CHMP2B-204ENST00000472024 FAM205BPQ63HN1 556 aa17.36■□□□□ 0.37
CHMP2B-204ENST00000472024 LAIR2Q6ISS4 152 aa17.36■□□□□ 0.37
CHMP2B-204ENST00000472024 GHDCQ8N2G8 530 aa17.36■□□□□ 0.37
CHMP2B-204ENST00000472024 TEX19Q8NA77 164 aa17.36■□□□□ 0.37
CHMP2B-204ENST00000472024 FAR1Q8WVX9 515 aa17.36■□□□□ 0.37
CHMP2B-204ENST00000472024 DNAJA3Q96EY1 480 aa17.36■□□□□ 0.37
CHMP2B-204ENST00000472024 TSPAN32Q96QS1 320 aa17.36■□□□□ 0.37
CHMP2B-204ENST00000472024 KLHL21Q9UJP4 597 aa17.36■□□□□ 0.37
CHMP2B-204ENST00000472024 SPENQ96T58 3664 aaKnown RBP17.35■□□□□ 0.37
CHMP2B-204ENST00000472024 IGKV3D-15A0A087WSY6 115 aa17.35■□□□□ 0.37
CHMP2B-204ENST00000472024 RNF13O43567 381 aa17.35■□□□□ 0.37
CHMP2B-204ENST00000472024 TRAF3IP2O43734 574 aaPredicted RBP17.35■□□□□ 0.37
CHMP2B-204ENST00000472024 PRKYO43930 277 aa17.35■□□□□ 0.37
CHMP2B-204ENST00000472024 WBP4O75554 376 aaKnown RBP17.35■□□□□ 0.37
CHMP2B-204ENST00000472024 KLK2P20151 261 aa17.35■□□□□ 0.37
CHMP2B-204ENST00000472024 RPL4P36578 427 aaKnown RBP17.35■□□□□ 0.37
CHMP2B-204ENST00000472024 EIF1AXP47813 144 aaKnown RBP17.35■□□□□ 0.37
CHMP2B-204ENST00000472024 CXCR4P61073 352 aa17.35■□□□□ 0.37
CHMP2B-204ENST00000472024 SLC17A1Q14916 467 aa17.35■□□□□ 0.37
CHMP2B-204ENST00000472024 OCLNQ16625 522 aa17.35■□□□□ 0.37
CHMP2B-204ENST00000472024 ST3GAL2Q16842 350 aa17.35■□□□□ 0.37
CHMP2B-204ENST00000472024 ARMC4Q5T2S8 1044 aa17.35■□□□□ 0.37
CHMP2B-204ENST00000472024 FGD2Q7Z6J4 655 aa17.35■□□□□ 0.37
CHMP2B-204ENST00000472024 UBQLNLQ8IYU4 475 aa17.35■□□□□ 0.37
CHMP2B-204ENST00000472024 ARIH2OSQ8N7S6 290 aa17.35■□□□□ 0.37
CHMP2B-204ENST00000472024 TMEM163Q8TC26 289 aa17.35■□□□□ 0.37
CHMP2B-204ENST00000472024 RNF128Q8TEB7 428 aa17.35■□□□□ 0.37
CHMP2B-204ENST00000472024 APH1BQ8WW43 257 aa17.35■□□□□ 0.37
CHMP2B-204ENST00000472024 CNBD2Q96M20 576 aa17.35■□□□□ 0.37
CHMP2B-204ENST00000472024 ERMAPQ96PL5 475 aaPredicted RBP17.35■□□□□ 0.37
CHMP2B-204ENST00000472024 TSPAN10Q9H1Z9 355 aaPredicted RBP17.35■□□□□ 0.37
CHMP2B-204ENST00000472024 EXO5Q9H790 373 aa17.35■□□□□ 0.37
CHMP2B-204ENST00000472024 RNF122Q9H9V4 155 aa17.35■□□□□ 0.37
CHMP2B-204ENST00000472024 IMPAD1Q9NX62 359 aa17.35■□□□□ 0.37
CHMP2B-204ENST00000472024 TVP23BQ9NYZ1 205 aa17.35■□□□□ 0.37
CHMP2B-204ENST00000472024 ADAM18Q9Y3Q7 739 aa17.35■□□□□ 0.37
CHMP2B-204ENST00000472024 IER3IP1Q9Y5U9 82 aa17.35■□□□□ 0.37
CHMP2B-204ENST00000472024 ZNF716A6NP11 495 aa17.34■□□□□ 0.37
CHMP2B-204ENST00000472024 CENPBD1B2RD01 187 aa17.34■□□□□ 0.37
CHMP2B-204ENST00000472024 AHCYL1O43865 530 aa17.34■□□□□ 0.37
CHMP2B-204ENST00000472024 RAMP1O60894 148 aa17.34■□□□□ 0.37
CHMP2B-204ENST00000472024 IFNGP01579 166 aa17.34■□□□□ 0.37
CHMP2B-204ENST00000472024 F13BP05160 661 aa17.34■□□□□ 0.37
CHMP2B-204ENST00000472024 DAP3P51398 398 aaKnown RBP17.34■□□□□ 0.37
CHMP2B-204ENST00000472024 RPL27P61353 136 aaKnown RBP17.34■□□□□ 0.37
CHMP2B-204ENST00000472024 ERVK-25P63136 954 aa17.34■□□□□ 0.37
CHMP2B-204ENST00000472024 HSF1Q00613 529 aa17.34■□□□□ 0.37
CHMP2B-204ENST00000472024 CDK5R2Q13319 367 aa17.34■□□□□ 0.37
CHMP2B-204ENST00000472024 SNAPC1Q16533 368 aa17.34■□□□□ 0.37
CHMP2B-204ENST00000472024 ACKR1Q16570 336 aa17.34■□□□□ 0.37
CHMP2B-204ENST00000472024 C19orf48Q6RUI8 117 aa17.34■□□□□ 0.37
CHMP2B-204ENST00000472024 UGT2A3Q6UWM9 527 aa17.34■□□□□ 0.37
CHMP2B-204ENST00000472024 ADCK1Q86TW2 530 aa17.34■□□□□ 0.37
CHMP2B-204ENST00000472024 IGFN1Q86VF2 1251 aa17.34■□□□□ 0.37
CHMP2B-204ENST00000472024 CCDC103Q8IW40 242 aa17.34■□□□□ 0.37
CHMP2B-204ENST00000472024 ZNF566Q969W8 418 aa17.34■□□□□ 0.37
CHMP2B-204ENST00000472024 ZNF845Q96IR2 970 aaPredicted RBP17.34■□□□□ 0.37
CHMP2B-204ENST00000472024 NR1H4Q96RI1 486 aaPredicted RBP17.34■□□□□ 0.37
CHMP2B-204ENST00000472024 GP6Q9HCN6 339 aa17.34■□□□□ 0.37
CHMP2B-204ENST00000472024 PNPLA3Q9NST1 481 aa17.34■□□□□ 0.37
CHMP2B-204ENST00000472024 ZNF346Q9UL40 294 aaKnown RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms