RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 MRPS18CQ9Y3D5 142 aaKnown RBP8.45□□□□□ -1.06
VPS52-216ENST00000471309 HDGFL3Q9Y3E1 203 aa8.45□□□□□ -1.06
VPS52-216ENST00000471309 OR2M5A3KFT3 312 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 OR6C68A6NDL8 312 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 ZIC3O60481 467 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 APOL3O95236 402 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 LIMS3P0CW19 117 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 LIMS4P0CW20 117 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 CLUP10909 449 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 SPI1P17947 270 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 GSTT1P30711 240 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 ATP6V1E1P36543 226 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 LIPAP38571 399 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 ETV1P50549 477 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 SH3BGRP55822 239 aaPredicted RBP8.44□□□□□ -1.06
VPS52-216ENST00000471309 WNT4P56705 351 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 RPL27P61353 136 aaKnown RBP8.44□□□□□ -1.06
VPS52-216ENST00000471309 ACTC1P68032 377 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 ACTA1P68133 377 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 TLE3Q04726 772 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 PUDPQ08623 228 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 CDC20Q12834 499 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 MLLT11Q13015 90 aaPredicted RBP8.44□□□□□ -1.06
VPS52-216ENST00000471309 MFAP5Q13361 173 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 OR1C1Q15619 314 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 ACKR1Q16570 336 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 KLHL12Q53G59 568 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 RAET1LQ5VY80 246 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 FAM205BPQ63HN1 556 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 SPINK14Q6IE38 97 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 LEG1Q6P5S2 330 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 SHFQ7M4L6 423 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 EXD3Q8N9H8 876 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 MDS2Q8NDY4 140 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 ATP6V1C2Q8NEY4 427 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 OR2M7Q8NG81 312 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 OR4F15Q8NGB8 312 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 OR51G2Q8NGK0 314 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 OR5M1Q8NGP8 315 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 OR9Q1Q8NGQ5 310 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 ZPLD1Q8TCW7 415 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 MIB2Q96AX9 1013 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 NMD3Q96D46 503 aaKnown RBP8.44□□□□□ -1.06
VPS52-216ENST00000471309 DNAJA3Q96EY1 480 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 OPALINQ96PE5 141 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 OR5M11Q96RB7 305 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 UBL7Q96S82 380 aaPredicted RBP8.44□□□□□ -1.06
VPS52-216ENST00000471309 MGLLQ99685 303 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 PIGQQ9BRB3 760 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 OR2B2Q9GZK3 357 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 YIPF3Q9GZM5 350 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 NAA50Q9GZZ1 169 aaKnown RBP8.44□□□□□ -1.06
VPS52-216ENST00000471309 OR51V1Q9H2C8 321 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 TXNIPQ9H3M7 391 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 ADGRL4Q9HBW9 690 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 ZFP64Q9NPA5 681 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 DEPPQ9NTK1 212 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 ERVK13-1Q9NX77 482 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 B4GALT7Q9UBV7 327 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 CLEC2DQ9UHP7 191 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 TRAPPC4Q9Y296 219 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 PCNX3Q9H6A9 2034 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 MPDZO75970 2070 aa8.44□□□□□ -1.06
VPS52-216ENST00000471309 WDR87Q6ZQQ6 2873 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 A0A1W2PRG6 482 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 PINLYPA6NC86 204 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 OR5H15A6NDH6 313 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 A6NIZ1 184 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 GJE1A6NN92 205 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 ZNF891A8MT65 544 aaPredicted RBP8.43□□□□□ -1.06
VPS52-216ENST00000471309 C12orf71A8MTZ7 269 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 C11orf98E9PRG8 122 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 NKX2-8O15522 239 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 SEC14L5O43304 696 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 NME2P1O60361 137 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 SERPINI2O75830 405 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 GLCEO94923 617 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 PMS2P2O95744 297 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 WDPCPO95876 746 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 PLGP00747 810 aaPredicted RBP8.43□□□□□ -1.06
VPS52-216ENST00000471309 RENP00797 406 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 SCG5P05408 212 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 GYPBP06028 91 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 SBK2P0C263 348 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 CD36P16671 472 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 SDHBP21912 280 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 NME2P22392 152 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 TCEA1P23193 301 aaKnown RBP8.43□□□□□ -1.06
VPS52-216ENST00000471309 SHC1P29353 583 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 CDKN2AP42771 156 aaKnown RBP8.43□□□□□ -1.06
VPS52-216ENST00000471309 RGS6P49758 472 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 DIO1P49895 249 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 DAP3P51398 398 aaKnown RBP8.43□□□□□ -1.06
VPS52-216ENST00000471309 SLC16A1P53985 500 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 B3GALT5-AS1P59052 145 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 GPR85P60893 370 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 RAP1BP61224 184 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 RAP1AP62834 184 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 SLC35A1P78382 337 aa8.43□□□□□ -1.06
VPS52-216ENST00000471309 FOXK1P85037 733 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms