RNA–Protein interactions for RNA: ENST00000471307.6

CCDC39-202, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-202ENST00000471307 AARDQ4LEZ3 155 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 BCL7AQ4VC05 210 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 CTSL3PQ5NE16 218 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 RSBN1Q5VWQ0 802 aaPredicted RBP4.16□□□□□ -1.74
CCDC39-202ENST00000471307 TMEM220Q6QAJ8 160 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 KDM7AQ6ZMT4 941 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 DND1Q8IYX4 353 aaKnown RBP4.16□□□□□ -1.74
CCDC39-202ENST00000471307 C4orf33Q8N1A6 199 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 BATF2Q8N1L9 274 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 CLDN19Q8N6F1 224 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 ZNF540Q8NDQ6 660 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 AGAP11Q8TF27 550 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 ASZ1Q8WWH4 475 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 RLN3Q8WXF3 142 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 KLK6Q92876 244 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 BIRC7Q96CA5 298 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 SGF29Q96ES7 293 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 BMFQ96LC9 184 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 TSNARE1Q96NA8 513 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 KLF6Q99612 283 aaPredicted RBP4.16□□□□□ -1.74
CCDC39-202ENST00000471307 CCM2Q9BSQ5 444 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 APOOQ9BUR5 198 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 IQCGQ9H095 443 aaKnown RBP4.16□□□□□ -1.74
CCDC39-202ENST00000471307 OR2AG1Q9H205 316 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 CAB39LQ9H9S4 337 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 NMRAL1Q9HBL8 299 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 IL1RAPQ9NPH3 570 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 TNFRSF19Q9NS68 423 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 NKIRAS1Q9NYS0 192 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 ATXN10Q9UBB4 475 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 TRMT6Q9UJA5 497 aaKnown RBP4.16□□□□□ -1.74
CCDC39-202ENST00000471307 RUVBL2Q9Y230 463 aaKnown RBP4.16□□□□□ -1.74
CCDC39-202ENST00000471307 PLLPQ9Y342 182 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 PCDHGA1Q9Y5H4 931 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 CEP192Q8TEP8 1941 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 RALGAPA1Q6GYQ0 2036 aa4.16□□□□□ -1.74
CCDC39-202ENST00000471307 FER1L5A0AVI2 2057 aa4.15□□□□□ -1.74
CCDC39-202ENST00000471307 THADAQ6YHU6 1953 aa4.15□□□□□ -1.74
CCDC39-202ENST00000471307 TRAV18A0A075B6X5 111 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 IGHV3-16A0A0C4DH30 117 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 TMEM120BA0PK00 339 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 MGAT4DA6NG13 374 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 IQCF5A8MTL0 148 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 GOLGA8RI6L899 631 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 K7EQG2 157 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 LIN7AO14910 233 aaPredicted RBP4.15□□□□□ -1.75
CCDC39-202ENST00000471307 RAD51BO15315 384 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 BIRC5O15392 142 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 ST8SIA3O43173 380 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 NIPSNAP2O75323 286 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 SPAG7O75391 227 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 MTX2O75431 263 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 POP7O75817 140 aaKnown RBP4.15□□□□□ -1.75
CCDC39-202ENST00000471307 WISP3O95389 354 aaPredicted RBP4.15□□□□□ -1.75
CCDC39-202ENST00000471307 SLC16A8O95907 504 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 CCDC166P0CW27 439 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 TDGF1P13385 188 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 CCR7P32248 378 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 RPA3P35244 121 aaPredicted RBP4.15□□□□□ -1.75
CCDC39-202ENST00000471307 FEN1P39748 380 aaKnown RBP4.15□□□□□ -1.75
CCDC39-202ENST00000471307 RABIFP47224 123 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 PRLHRP49683 370 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 RGS4P49798 205 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 PFN3P60673 137 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 IL9RQ01113 521 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 CSTF1Q05048 431 aaKnown RBP4.15□□□□□ -1.75
CCDC39-202ENST00000471307 GAMTQ14353 236 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 SGCBQ16585 318 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 HFEQ30201 348 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 IQCCQ4KMZ1 466 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 TMEM31Q5JXX7 168 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 HHATQ5VTY9 493 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 FAM166AQ6J272 317 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 Q6ZSR6 202 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 LPCAT2Q7L5N7 544 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 COX8CQ7Z4L0 72 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 CMC1Q7Z7K0 106 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 AMZ2Q86W34 360 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 CENPLQ8N0S6 344 aaPredicted RBP4.15□□□□□ -1.75
CCDC39-202ENST00000471307 SIDT2Q8NBJ9 832 aaKnown RBP4.15□□□□□ -1.75
CCDC39-202ENST00000471307 OR56A4Q8NGH8 313 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 RHEBL1Q8TAI7 183 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 STAG3L4Q8TBR4 150 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 RDH11Q8TC12 318 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 CD200R1Q8TD46 325 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 TCP10LQ8TDR4 215 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 EEF1AKMT1Q8WVE0 214 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 BCL2L2Q92843 193 aaPredicted RBP4.15□□□□□ -1.75
CCDC39-202ENST00000471307 NSMCE2Q96MF7 247 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 TAAR6Q96RI8 345 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 GPR21Q99679 349 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 MRPL57Q9BQC6 102 aaKnown RBP4.15□□□□□ -1.75
CCDC39-202ENST00000471307 DERL2Q9GZP9 239 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 SRD5A3Q9H8P0 318 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 CLEC5AQ9NY25 188 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 TMEM216Q9P0N5 145 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 GALPQ9UBC7 116 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 TMCO1Q9UM00 188 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 PLCL2Q9UPR0 1127 aa4.15□□□□□ -1.75
CCDC39-202ENST00000471307 VSIG4Q9Y279 399 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms