RNA–Protein interactions for RNA: ENST00000470563.5

RBM39-227, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-227ENST00000470563 HERVK_113P63132 956 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 ZNF45Q02386 682 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 FADDQ13158 208 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 RCAN2Q14206 197 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 CYP51A1Q16850 503 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 LRIT3Q3SXY7 679 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 PMF1Q6P1K2 205 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 Q6ZRG5 221 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 RNF165Q6ZSG1 346 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 AKAP14Q86UN6 197 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 RANBP3LQ86VV4 465 aaPredicted RBP4.53□□□□□ -1.68
RBM39-227ENST00000470563 ZFAND4Q86XD8 727 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 MMAAQ8IVH4 418 aaKnown RBP4.53□□□□□ -1.68
RBM39-227ENST00000470563 CCNYL1Q8N7R7 359 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 ADAD2Q8NCV1 583 aaKnown RBP4.53□□□□□ -1.68
RBM39-227ENST00000470563 RHEBL1Q8TAI7 183 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 UBA3Q8TBC4 463 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 KCTD4Q8WVF5 259 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 PNPLA2Q96AD5 504 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 LRRC58Q96CX6 371 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 FBXO17Q96EF6 278 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 ALKBH3Q96Q83 286 aaPredicted RBP4.53□□□□□ -1.68
RBM39-227ENST00000470563 NPY6RQ99463 290 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 KCTD14Q9BQ13 255 aaPredicted RBP4.53□□□□□ -1.68
RBM39-227ENST00000470563 MTG1Q9BT17 334 aaPredicted RBP4.53□□□□□ -1.68
RBM39-227ENST00000470563 NDUFAF3Q9BU61 184 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 ERVK-6Q9BXR3 956 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 SYNDIG1Q9H7V2 258 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 FANCEQ9HB96 536 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 PLCXD1Q9NUJ7 323 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 GPATCH2LQ9NWQ4 482 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 CCDC167Q9P0B6 97 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 MIOXQ9UGB7 285 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 GAB2Q9UQC2 676 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 PDE10AQ9Y233 779 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 TPRKBQ9Y3C4 175 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 ANGPTL3Q9Y5C1 460 aa4.53□□□□□ -1.68
RBM39-227ENST00000470563 NLRC5Q86WI3 1866 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 TRPM7Q96QT4 1865 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.52□□□□□ -1.69
RBM39-227ENST00000470563 IGHV3-38A0A0C4DH36 116 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 CLRN2A0PK11 232 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 CLDN24A6NM45 220 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 SYCE1LA8MT33 242 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 A8MU76 341 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 M0R3G1 203 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 FXYD1O00168 92 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 NME4O00746 187 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 AZIN1O14977 448 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 WISP3O95389 354 aaPredicted RBP4.52□□□□□ -1.69
RBM39-227ENST00000470563 PTBP3O95758 552 aaKnown RBP4.52□□□□□ -1.69
RBM39-227ENST00000470563 GUCA1CO95843 209 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 PGK1P00558 417 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 IGHG1P01857 330 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 CHRNA1P02708 482 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 GNSP15586 552 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 PTPN6P29350 595 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 PGFP49763 221 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 PLA2G16P53816 162 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 TMEM50BP56557 158 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 TPI1P60174 286 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 CRADDP78560 199 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 EMX2Q04743 252 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 CHRNB3Q05901 458 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 ZNF177Q13360 481 aaPredicted RBP4.52□□□□□ -1.69
RBM39-227ENST00000470563 MLF2Q15773 248 aaPredicted RBP4.52□□□□□ -1.69
RBM39-227ENST00000470563 ANKDD1AQ495B1 522 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 ZNF678Q5SXM1 525 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 LIPJQ5W064 366 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 XAF1Q6GPH4 301 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 TTC23LQ6PF05 361 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 XKRXQ6PP77 449 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 GOLGA7Q7Z5G4 137 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 CDR2LQ86X02 465 aaPredicted RBP4.52□□□□□ -1.69
RBM39-227ENST00000470563 HIPK1Q86Z02 1210 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 PHC2Q8IXK0 858 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 FAM9CQ8IZT9 166 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 CLEC4FQ8N1N0 589 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 ZCCHC7Q8N3Z6 543 aaKnown RBP4.52□□□□□ -1.69
RBM39-227ENST00000470563 PRSS33Q8NF86 280 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 NUP37Q8NFH4 326 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 OR8J3Q8NGG0 315 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 OR52B4Q8NGK2 314 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 OR6Q1Q8NGQ2 317 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 OR5K1Q8NHB7 308 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 GRPEL2Q8TAA5 225 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 MAGEE2Q8TD90 523 aaPredicted RBP4.52□□□□□ -1.69
RBM39-227ENST00000470563 TMEM37Q8WXS4 190 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 PINX1Q96BK5 328 aaKnown RBP4.52□□□□□ -1.69
RBM39-227ENST00000470563 LGMNQ99538 433 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 SH3GL1Q99961 368 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 TBL1YQ9BQ87 522 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 GABARAPL1Q9H0R8 117 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 GORASP2Q9H8Y8 452 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 TREX1Q9NSU2 369 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 SLC35D1Q9NTN3 355 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 GDAP2Q9NXN4 497 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 CCDC59Q9P031 241 aaKnown RBP4.52□□□□□ -1.69
RBM39-227ENST00000470563 HMGXB4Q9UGU5 601 aa4.52□□□□□ -1.69
RBM39-227ENST00000470563 FBXO5Q9UKT4 447 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms